KEGG   Calonectris borealis (Cory's shearwater): 142074326
Entry
142074326         CDS       T11211                                 
Name
(RefSeq) splicing factor U2AF 65 kDa subunit isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
cbor  Calonectris borealis (Cory's shearwater)
Pathway
cbor03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cbor00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    142074326
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cbor03041]
    142074326
Spliceosome [BR:cbor03041]
 Complex A
  U2 snRNP components
   U2 related factors
    142074326
 Complex B
    142074326
SSDB
Motif
Pfam: RRM_1 RRM_MUD2_C DUF8489 RRM_occluded RRM_7 Transformer DUF8407 Phage_T7_kinase
Other DBs
NCBI-GeneID: 142074326
NCBI-ProteinID: XP_074991024
LinkDB
Position
34:complement(872718..881125)
AA seq 466 aa
MSDFDEFERQLNENKQERDKENRHRKRSHSRSRSRDRKRRSRSRDRRNRDQRSVSRDRRR
RRSPLSLSGPLSRSPRHEKKKKIRKYWDVPPPGFEHITPMQYKAMQAAGQIPATALLPTM
TPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNP
VLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVY
VPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC
EYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLSTINQTPVTLQVPGLMSSQVQ
MGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECGKYGLVKSIEIPRPVDGVEVPGC
GKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDFW
NT seq 1401 nt   +upstreamnt  +downstreamnt
atgtcggacttcgacgagttcgagcgacagctcaacgagaacaaacaagagcgcgacaag
gagaaccggcaccggaagcgcagccacagccgctcccgcagccgggaccggaaacgtcgg
agtcgcagccgggatcggagaaaccgggatcaacgcagcgtctcccgcgaccgccggcgg
cgccggtcacccctgagcctttcgggacccctgagccgctccccccgccacgagaagaag
aagaagatccgcaagtactgggacgtgcccccccccggcttcgagcacatcacccccatg
cagtacaaagccatgcaagccgcggggcagatcccggccacggcgctgctgcccaccatg
acccccgacggcctggccgtcacccccacgccggtgccggtggtgggcagccagatgacg
cggcaggcgcggcgcctctacgtcggcaacatccccttcggcatcaccgaggaagccatg
atggatttcttcaacgcccagatgcggctgggggggctgacccaggcgccggggaacccc
gtcctggccgtccagatcaaccaggataaaaatttcgcctttttggagttccgctcggtg
gacgagaccacgcaggcgatggcgttcgacgggatcatcttccaagggcagtcgctgaag
atccgccgcccccacgactaccagccgctgcccgggatgtcggagaacccctccgtctac
gtcccgggcgtcgtctccacggtggtgcccgactccgctcacaagctcttcatcgggggc
ctccccaactacctgaacgacgaccaggtgaaggagctgctgacgtctttcggacccctg
aaagccttcaacctggtgaaggacagcgccaccggcctctccaagggctacgccttctgc
gagtacgtcgacatcaacgtcaccgaccaggccatcgcggggctcaacgggatgcagctg
ggggacaagaagctgctggtgcagcgggccagcgtgggggccaagaacgccaccctgagc
acgataaaccagaccccggtgacgctgcaggtgcccgggctgatgagctcgcaggtgcag
atgggcggccaccccaccgaggtgctgtgcctgatgaacatggtgctgcccgaggagctg
ctggacgacgaggagtacgaggagatcgtggaggacgtgcgggacgagtgcggcaaatac
gggctcgtcaaatccatcgagatcccccggcccgtcgacggcgtcgaggtgccgggatgc
ggaaagatcttcgtggagttcacctcggtcttcgactgccagaaggcgatgcagggcctg
accggccgcaagttcgccaacagagtcgtcgtcaccaagtactgcgaccccgactcctac
caccgccgcgacttctggtag

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