Calonectris borealis (Cory's shearwater): 142074508
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Entry
142074508 CDS
T11211
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04120
Ubiquitin mediated proteolysis
cbor04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
142074508 (SYVN1)
04120 Ubiquitin mediated proteolysis
142074508 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cbor04121
]
142074508 (SYVN1)
Enzymes [BR:
cbor01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
142074508 (SYVN1)
Ubiquitin system [BR:
cbor04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
142074508 (SYVN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
U-box_ZFPL1
zf-RING_5
zf_RING_Vps8_fungal
zf-ANAPC11
zf-RING-like
zf-RING_Vps41
FAR1_N
zf-HC5HC2H
zf-Nse
Endonuclease_7
Motif
Other DBs
NCBI-GeneID:
142074508
NCBI-ProteinID:
XP_074991273
LinkDB
All DBs
Position
37
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AA seq
551 aa
AA seq
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MLCTAVVMAGSLALTTAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHFRIVSLMFLLGILDFLFVNHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSIDLQNENPWDSKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAVDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQPPPEPPEQAPPPPQTPQVP
QPPNFPQGILPPFPPGMFPFWPPVGPFPPVPGVQPPNSAENAAPSSGAASAARPGDAANA
GSETAAAGTVPGLPFPPPWMGMPWPPLFGFPPMPVPPAGFAGLTEEELRAMEGHDRQNLE
ARLQCLQNIHTLLDAAMVQINQYLTVLATIGSPRPAAPRPPSARETPAEDPTPLRSPGSP
SAPAGAAAAGA
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgctctgcacggcggtggtgatggcgggcagcctggcgctgacgacagcggtggtggct
cacgcctattacctgaagcaccaattttatcccaccgtggtttatctcaccaaatccagc
cccagcatggccgttctctacatccaggccttcgtgttggtttttctcctgggtaaattt
atgggcaaggtgtttttcgggcagctgcgggcagcggagatggagcacctactcgagcgg
tcgtggtacgccgtgacggagacctgcctggccttcaccgtcttcagggacgacttcagc
cctcgcttcgtcgccctcttcaccctcctcctcttcctcaagtgcttccactggttggct
gaagaccgggtggactttatggaaaggagccccaacatctcctggctcttccacttccgt
atcgtctccctgatgttccttctgggaatcctggatttcctcttcgttaaccacgcctac
cacagcatcctcacgcgaggagcctccgtccagctcgtcttcggcttcgagtacgccatc
ctcatgaccatggtgctcaccatcttcatcaagtacgtcctgcactccatcgacctgcag
aacgagaacccgtgggacagcaaagccgtctacatgctgtacacggagctcttcacgggc
ttcatcaaagtcctcctctacatggccttcatgaccatcatgatcaaagtccacaccttc
ccgctcttcgccatccgccccatgtacctggccatgaggcaattcaagaaagcggtgacg
gacgccatcatgtcccgccgggccatccgcaacatgaacaccctttaccccgacgccacg
ccggaagagctgcaggccgtggacaacgtctgcatcatttgccgcgaggagatggtgacg
ggcgccaagcgtttgccttgtaaccacatcttccacaccagctgcctgcggtcgtggttc
cagcgccagcagacgtgtcccacctgccgcatggacgttctccgggcttccctcccggca
cagccgcctcccgaaccgccggaacaagccccaccaccaccccagaccccccaagttcct
caaccccccaactttccgcagggaatccttcctcccttcccgccgggaatgtttcctttc
tggccgccggttggtcccttcccgccggttcccggcgtccaaccgcccaacagcgccgaa
aacgccgcgccgagctccggcgccgcttcggccgccaggcctggtgacgccgccaacgcc
ggatcggaaaccgcggcggccgggacggtgccgggtcttcctttcccaccgccgtggatg
gggatgccgtggccgcccctcttcggcttcccgccgatgccggtgccgccggccggcttt
gccggcttaacggaggaagaacttcgagccatggagggccacgatcggcaaaacctggag
gcgcggttgcagtgcctgcagaacatccacaccctcctcgacgccgccatggtgcagatc
aaccagtacctgacggtcctggccaccatcgggtcgccccggcccgccgctccccggccc
ccctccgcccgtgagacccccgccgaggaccccaccccgctccgctcccccggcagccct
tcggcacccgccggcgccgccgccgccggtgcgtga
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