Calonectris borealis (Cory's shearwater): 142074587
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Entry
142074587 CDS
T11211
Symbol
CHD8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
142074587 (CHD8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cbor03036
]
142074587 (CHD8)
Chromosome and associated proteins [BR:
cbor03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
142074587 (CHD8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_Hrp3
MUN
Chromo_MIT1
Myb_DNA-bind_7
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
142074587
NCBI-ProteinID:
XP_074991384
LinkDB
All DBs
Position
38:complement(517488..562641)
Genome browser
AA seq
2111 aa
AA seq
DB search
MADPIMDLFDDPNLFGLDPLTDESFAPPSHDPIEEALSLTGALDPPPAPPKPPSQEPLPP
QNPPDPPQSQLPPDGEILSQGNPFMGVTATLTPTPSSSTGVPQPPKIVILKAPPTAGAGG
GGPQTSTVPPQTGGTPPNGGKVTFAKVLTAAPQLRPGVSIVTGNAATVLTGKITGSGTGN
SGPAPSAAAVHRLVQPGRPVKQLVLQPVKTGGTGTPLKPAVTLTSAPAQGESKRITLVLQ
QPPGGSAPPGQRHVVLGSLPGKIVLQGNQLAALGQAKGTPGQPAKVVTIQLQVQQPPAGQ
PGAPQKIQLLQQPAGAGGQPAPVAVSSVPQVVGGAGQRLTVPLKVVLQPQAGSSQGGSPG
LSVVKVLSSTEVAALASPGSRGASEESRKLEHQKKQEKANRIVAEAIARARARGEQNIPR
VLNEDELPSVRPEEEGERKRRRKGTGDRGGPKEERPRKGKGQGGSGKSKGRSKPSTITPV
VGKKRKRNASSDNSDAEVMPAQSPREEEETSVQKRRSNRQVKRKKYTEDLDIKITDDEDD
EELDVTGPVRTEQPPIPQLPIPEPEPEGETLPSMQFFVENPSEEDAAIVDKVLSMRVVKK
ELPSGQLTESEEFFVKYKNYSYLHCEWATIDQLEKDKRIHQKLKRFKTKMTQMRHFFHED
EEPFNPDYVEVDRILDESHSVDKDNGEPVVYYLVKWCSLPYEDSTWELKEDVDEGKIGEF
KRIQARHPELKRLPRPQAGSWKKLELSHEYKNHNQLREYQLEGVNWLLFNWYNRQNCILA
DEMGLGKTIQSIAFLQEVYNVGIRGPFLVIAPLSTITNWEREFNTWTEMNSIVYHGSLAS
RQMIQQYEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIEWRCVIIDEAHRLKN
RNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSEAEFLKDFGDLKTE
EQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKG
AGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILAEFRESCHHHVPHDFHLQAMVRSAGK
LVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQKRYLYERIDGRVRGNLRQAAIDR
FSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKV
YRLITRNSYEREMFDKASLKLGLDKAVLQSMSGREGNIAGIQQFSKKEIEDLLRKGAYAA
IMEEDDEGSKFCEEDIDQILLRRTTTITIESEGKGSTFAKASFVASENRTDIALDDPNFW
QKWAKKADLDLDLLNSKNNLVIDTPRVRKQTRHFSTLRDDDLVEFSDLESEDEERPRSRR
HDRHHHALHHAYGRTDCFRVEKHLLVYGWGRWREILSHARFKRRLSERDVETICRAILVY
CLLHYRGDENIKGFIWDLISPTENGKAKELQNHSGLSIPVPRGRKGKKVKSQSTFDVHKA
EWIRKYNPDTLFQDESYKKHLKHQCNKVLLRVRMLYYLRQEVIGDQAEKVLAGAVASEID
IWFPLVEQLEVPTAWWDAEADKSLLIGVFKHGYEKYNTMRADPALCFLEKAGRPDEKAIA
AEQRLDVGEGVDFDKDCEDPEYKPLPGTAKEVDEETDPLMLLDEEISVVDGDEGQPPQPG
QPFWPPGSVLTARLRRLITACQRSYQREQLRVEAAERGDRRRRRCEAACKLKEMARREKQ
QRWTRREQADFYRVASSFGVEFDPEGGRFRWGRFRTLARLEKKTDENLTKFFHGFVAMCR
QVCRLPPAPGDEPPDPSIPVSPVSAVRASRGLRRLSLLRLLREQVLRHPLLPTRLALCPP
PGPDLPPWWQRGHHDGELLRGAARHGLAHPETSILGDPDFSFAAARWRYLRAQAEVGGTP
PPPPPPPPPPPQNIPARPTPPPPPTEDEDSELEKLSASVSESSSCEEESDEERGAEPTCG
AEEEEEEEEEEEEEEEEEEEEEEEESPPPAGLGGSPGPPPGPLPGPPPAPPHLHEWPKDR
ALIRRLDLVCQAVLSGEWPSENFGGSPGGYPEISPAPPHPPQPPPAADPPPYTRLRHEEK
ESRSRSKTRRG
NT seq
6336 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccccatcatggacctcttcgacgaccccaaccttttcggtctcgatccttta
acggacgaaagcttcgccccgccctcccacgatccaatcgaagaagctttaagtttaacg
ggggctttagacccgccccccgcccccccaaaacctccttcccaagaacctttgcccccc
caaaatcctcccgacccccctcaatctcaactcccccccgatggcgaaatcctcagtcaa
ggcaacccctttatgggggtcaccgccaccttgacccccaccccttcttcatcaaccggg
gtaccccaaccccccaaaatcgtcatcctcaaagcccccccgaccgcgggggcgggaggg
gggggaccccaaacttctaccgttcccccccaaaccggggggaccccccccaacgggggg
aaagtcactttcgccaaggttttaaccgccgctcctcaacttcgtcccggcgtttccatc
gttaccggcaacgccgcaaccgttttaaccggaaaaatcaccggaagcggaacgggaaat
agcggccccgccccttccgccgctgccgttcaccgattggttcaaccgggaagacccgtc
aagcaattggttttgcaaccggttaaaacgggaggaaccgggacacccctaaaacccgcc
gtcaccctgacgtcggcgccggcgcagggcgaatcgaaacgcatcacgctggtgctgcaa
caaccgccgggcggtagcgctccgcccggtcaacgccacgtggtattgggcagtttgccg
ggcaaaatcgttctacagggcaaccaattggccgccctcggtcaagccaaagggacgccg
ggtcaacccgccaaggtggtcaccatccaactccaggttcaacaaccacccgccggccaa
ccaggagccccccagaagatccagctcctccaacaacccgccggcgccggtggccaaccg
gctcccgtggccgtctcctccgtgccgcaggtggtgggaggggcggggcaaaggttgacg
gtgccgttgaaggtggtcctgcaaccccaggccggctcatctcaggggggttctcccggt
ctatcggtggtgaaggtcctgagcagcaccgaggtggccgccctggccagccccggctcg
cggggtgcctcggaggagagccgcaagttggaacatcagaagaagcaggagaaagccaat
cgcatcgtagccgaggccatcgctcgcgcccgagcccggggcgagcagaacatcccccgg
gtcctcaacgaggacgaactgcccagcgtccgaccggaagaggagggcgaacggaaacgc
cggcggaaagggaccggtgaccgcgggggacccaaggaggagagaccccgaaagggcaaa
ggtcagggtggctccggcaagagcaaggggcgcagcaaacccagcaccatcacgccggtg
gtgggcaagaaacggaagcgcaacgcctcctccgacaactccgacgccgaggtgatgccg
gcgcagtcgccgcgggaggaagaagaaaccagcgtccagaagcgtcggtcgaatcgacaa
gtcaaacggaagaagtacaccgaagatttggacatcaagatcaccgatgatgaagatgat
gaagaattggatgtgacggggccggttcgaaccgaacaacctccgatcccgcaacttccc
atcccggaaccggaaccggaaggggagacgttaccctccatgcaattttttgtggaaaac
cccagcgaggaggacgcggccatcgtggacaaggtcctctccatgagggtggtgaagaaa
gagcttccgtcgggacaattgaccgaatcggaagaatttttcgtcaaatacaagaactat
tcctacctccactgcgagtgggccaccatcgaccaactggagaaggacaagaggatccat
cagaagttgaaacgtttcaagacgaagatgactcagatgcgacactttttccacgaggat
gaagaacctttcaaccccgactacgtggaggtggatcgtatcttggacgagtcccacagc
gtcgacaaggacaacggggagccggtggtctactacttggtgaagtggtgctccctaccc
tacgaagacagcacttgggaactcaaggaggacgtagacgagggaaaaatcggagaattc
aaacgcatccaagcccggcacccggaactcaagcgtttgccccgtccacaagccggttct
tggaagaagctggagctttctcacgagtacaagaaccacaaccagcttcgcgaatatcaa
ctggagggggtcaactggttgctcttcaactggtacaacaggcagaactgcatcttggcc
gatgagatgggtttgggcaagaccatccaatccatcgcctttctccaagaggtctacaac
gttggtatccgtggtcctttcttggtcatcgctcctctttccaccatcaccaactgggaa
cgggagttcaatacttggacggagatgaacagcatcgtctaccacggcagtttggcttct
cgtcagatgatccaacagtacgagatgtactgcaaggattcgcggggtcgtctcatcccc
ggagcctacaagtttgacgcgctcatcaccaccttcgagatgatcctctccgactgtccc
gagctgcgggagatcgagtggaggtgcgtcatcatcgacgaggcccaccgtttgaagaac
cgcaactgcaagttgctcgacagtctcaagcacatggatctggaacacaaagtcctcttg
acgggcaccccgctccaaaacacggtggaagagctcttcagtctcctgcacttcctggag
ccctcccagtttccttctgaagcagagttcctcaaggattttggggacctcaagacagag
gagcaggtgcagaagctccaggccatcctcaagcccatgatgctccgtcgcttgaaggag
gacgtggagaagaacctggctcccaaacaggagaccatcattgaggtggagttgaccaac
attcagaagaaatactaccgggccatcttggagaagaacttctccttcctctccaaaggc
gctggtcataccaacatgcccaacctgctcaacaccatgatggagctgcgcaagtgctgc
aaccacccctacctcatcaacggcgcggaggagaagatcttggccgaatttcgggaatct
tgccaccaccacgtcccccacgacttccacctccaggccatggtccgctcggccggcaag
ctggtgctcatcgacaaactgctgcccaagctgaaggccggcggccacaaggtgctcatc
ttctcccagatggtccgatgcctcgacatcttggaggactacctcatccagaagaggtac
ctctacgagcgaatcgatggaagggtccggggcaacctacgccaagccgccatcgatcgt
ttcagcaagcccgactccgatcgcttcgtcttcctcctctgcacgcgggccggtggcttg
ggcatcaacctcaccgccgccgacacctgcatcatcttcgattccgattggaacccccaa
aacgacctccaggctcaagcgcggtgtcatcggattggccagagcaaggcggtgaaggtc
tatcgcctcatcacgcggaactcctacgagagggagatgttcgacaaggccagtctcaag
ttgggacttgacaaggccgtgttgcagtccatgagcggacgtgaaggcaacatcgcgggg
atccaacagttctccaaaaaggagatcgaggacctgctgcgcaagggggcctacgcggcc
atcatggaagaggacgacgaaggttccaagttctgcgaggaggacatagaccagatcctg
ctgcgtcgcaccaccaccatcaccatcgagagcgaggggaagggttccaccttcgccaag
gcgagcttcgtggcctctgaaaaccgcaccgacatcgccttggatgaccccaacttctgg
cagaagtgggccaagaaagccgacctggacctagacctgttgaacagcaagaacaacctg
gtgatcgacacgccgcgggtgcgcaagcagacgcgacacttcagcacccttcgagacgat
gacctggtggagttctcggacctggagagcgaggatgaggagagaccgcggtcccgtcgc
cacgaccggcaccaccacgccttgcaccacgcctacggccgcaccgactgcttccgcgtg
gagaagcatctcctggtctacggctggggccgatggcgggagatcctctcccacgcgcgg
ttcaagcgacgtctttcggagcgagacgtggagaccatctgccgggccatcttggtctac
tgtctcctgcactaccgaggagatgagaacatcaaaggcttcatctgggacctcatcagc
cccaccgagaacggcaaggccaaggagctccaaaaccattcgggtctttccatcccggtt
cctcgaggtcgtaaaggcaagaaggtcaaatcccaaagcacctttgatgtccacaaagcc
gagtggatccgcaagtacaaccccgacaccctcttccaagacgagagctacaagaagcac
ctcaaacaccaatgcaacaaggttctgctgagggtccggatgctctactacctgcggcag
gaggtgatcggggatcaggcggagaaggtgttggcgggggcggtggccagcgagatcgac
atctggttcccgctggtggagcaactggaggtaccgacggcgtggtgggacgccgaagcc
gacaaatccctcctcatcggggtcttcaaacacggctacgagaagtacaacaccatgcgc
gccgaccccgctctctgcttcttggagaaagccggccgccccgacgagaaggctatcgct
gccgagcagcgcttggacgtcggggaaggcgtggatttcgataaggactgcgaggacccc
gaatacaaacccctcccggggacggccaaggaggtggacgaggagactgaccccctgatg
ctgctggacgaggagatctcggtggtggacggggacgaaggccaacccccccaaccgggc
caacccttctggccccccggttcggtgctgacggcccggttacgccggctgatcaccgcc
tgccaacgttcctaccaacgggagcagctccgggtggaggcggccgagcggggggaccga
cgccgccggcgctgcgaggccgcctgcaagctgaaggagatggccaggagggagaaacaa
cagaggtggacccgtcgggaacaagcggatttttaccgggtggcttccagtttcggagtg
gaatttgatcccgagggaggtcgtttccgttgggggcgattccggaccttggccaggttg
gagaagaagacggacgagaacctcaccaagttcttccatggtttcgtcgccatgtgccgg
caggtttgccgtctgccgcccgcccccggagacgaacctccggatccttccatccccgtt
tcacccgtctcggccgttcgagcttcacgaggtcttcgccgcttgtccctcctccgtctt
ctccgcgaacaggtcctccggcaccccctcctccccacccgcctggccctgtgtccccca
cccggtccggaccttcccccttggtggcaacgaggtcaccacgatggagaacttctccgt
ggtgccgcccggcacggtttggctcaccccgaaacctccatcttgggggaccccgacttc
tccttcgcggcggcgcggtggcgttatctccgggctcaagctgaagttggggggaccccc
cccccacctccgccgcctcctccgccgcccccccaaaatatcccggctcgtcccacccca
ccgccgccgcccaccgaggacgaggactcggagttggagaagttgtcggcgtccgtctcc
gagtcgtcttcttgcgaggaggagagcgatgaggagaggggggcggagccgacctgcggg
gcggaggaggaagaagaggaggaggaagaggaagaggaggaggaagaggaagaggaagag
gaggaggaggaagagtcgcccccccccgccggtttgggggggtccccagggccccccccg
ggccccctcccggggccccccccggcccccccccacctccacgagtggcccaaggaccga
gccctcatccgccggctggacctggtgtgccaagcggtgctgtcgggcgagtggccgtcg
gaaaatttcggggggtccccgggggggtaccccgaaatctcccccgcacccccgcacccc
cctcaaccccccccggccgccgacccccccccttacacccgcctgcgccacgaggagaaa
gagtcacggtccagatcaaagacgaggaggggttga
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integrated database retrieval system
