Calonectris borealis (Cory's shearwater): 142074828
Help
Entry
142074828 CDS
T11211
Name
(RefSeq) uncharacterized protein LOC142074828 isoform X1
KO
K22376
E3 ubiquitin-protein ligase KCMF1 [EC:
2.3.2.27
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cbor04121
]
142074828
Enzymes [BR:
cbor01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
142074828
Ubiquitin system [BR:
cbor04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
142074828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Di19
Lipase_GDSL_2
Di19_C
zf-C2H2
OSK
Borrelia_P83
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
142074828
NCBI-ProteinID:
XP_074991812
LinkDB
All DBs
Position
W:complement(48739212..48836176)
Genome browser
AA seq
658 aa
AA seq
DB search
MVTTRQKAVSSAAPELLAPSRTNAATQTELLFRHAPTQVSGCGMCEGIFLEVESDCKQDC
GRCDQIDELLCLVAELQEEVSRLRSIRESEKEIDQWSRTLPSMMHRSQLSVATMEAGPGS
ALCQEEGSVTRDKEGWKKVTAQSGKRNPSLPSKITLQNRYEALGTVDEAHNEKEEEPVQA
VLPRSERPTPRNKTCIKTSAEKEQRRVMVIGDSLLCRTEAPICRPDPLFREVCCLPGAQI
RDVTTRLESLVQPSDYYPFLLFHVGTNDVATKSLRSIKRDFRALGRMLKTSGAQVVFSSI
LPVMGGDLGRNRRDQDINTWLQDWCLRQNFGVLNHGRAFKRQDLYYGGEAFSVEQPQSFT
CPYCGKMGYTETSLQEHVASEHAETSTEVICPICAALPGGDPNHVTDDFAAHLTLEHRAP
RDLDESSGVRHVRRMFHPGRGLGGPRARRSNMHFTSSSTGGLSSSQSSYSPSNRETMDPI
AELLSQLSGVRRSAGQLNSSGPSASQLQQLQMQLQLERQHAQAARQQLETARNATRRTNT
SSIPATLTQSIAAANTSNTENNQQTIQNSQFLLTRLNDPKMSEAERQSKESERADRSLFV
QELLLSTLMREESSSSDEDERGEIADFGAMGCVDIMPLDVALENLNLKENNKGNEPPL
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggtgaccacccggcaaaaagcagtgtcctctgctgctcctgagcttctagcacccagt
agaaccaatgcagccacacagacagagctcctgttcaggcatgcgcccacccaggtttcc
ggctgtgggatgtgtgaagggatattcctagaggtggaaagtgattgcaagcaagactgt
gggaggtgtgaccagattgatgaactgctctgcttggtggctgagctgcaggaggaggtg
agcagactgaggagtattcgagagtctgagaaggagattgatcaatggagccgtactctg
ccatctatgatgcatagaagccaactcagtgtggcaactatggaggcgggtcctggatct
gctttgtgccaggaggaaggcagtgtcacaagggataaggaggggtggaagaaggttaca
gcacagagcggtaagagaaacccctccttaccctctaagataaccttacagaataggtac
gaggccctgggtacggtagatgaagcgcataatgagaaagaggaggaacctgtgcaagca
gtcttgccaagatcagagagaccaacccctcgcaacaagacctgcattaagaccagtgcc
gagaaggaacaacggcgagttatggtcattggtgattccctcctgtgcagaacagaagca
cccatttgcagaccggaccctcttttcagggaagtttgctgcctccctggggcccaaatt
agggacgtcaccacaagactggagagcctagttcaaccttcagactactatccattcctg
ctctttcacgtgggtacaaatgatgtcgcaacaaaaagtctgaggtcaatcaaaagagac
ttcagagccctgggaagaatgctaaaaacttcgggagcacaggtagtattttcctcaatc
ctcccagtaatggggggagaccttggaagaaacaggcgagaccaggatatcaatacctgg
ctccaggactggtgcctccgccaaaactttggggttttaaaccacggaagagccttcaag
agacaagatttgtattatggtggagaagctttctctgtagagcagccacagtcctttact
tgtccttattgtggaaagatgggttatacggaaacatctcttcaagaacatgttgcttct
gaacatgcagaaacatcaacagaggtgatttgtccaatatgtgcagcattacctggaggg
gatcctaatcatgtcacagatgactttgcagctcatcttacactggaacacagagctcct
agagatttagatgaatctagtggcgttcggcacgtacgtagaatgtttcacccaggccgg
ggtttgggaggcccccgtgcacgtagatcaaacatgcactttactagcagttccactggt
gggctttcatcttctcagagttcatattctccaagcaatagagaaaccatggatcctata
gctgagcttttatctcagttatcaggcgtgagacgatctgcagggcagctcaattcttct
ggcccttctgcttctcagttacagcagctgcagatgcaactgcagttggagcgacagcat
gcacaggcagcaagacaacaactggagactgcacgcaatgcaactagacgcactaacaca
agcagcatccccgccactcttacacaatctatagcagcagccaatacatctaacacagaa
aacaatcagcagactatacagaattcacagtttcttcttacgaggttgaatgatcctaag
atgtcagaagcagagcgtcagtcaaaggaaagcgaacgggcagaccgcagcttgtttgtt
caagagcttctgctgtccactttgatgcgggaagaaagttcctcctcagatgaggatgaa
cggggagagattgctgattttggtgctatgggctgtgtagatattatgcctctagatgtt
gctttagaaaacctaaatttaaaagagaataataaaggaaatgagcctcctctttga
DBGET
integrated database retrieval system
