Calonectris borealis (Cory's shearwater): 142075026
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Entry
142075026 CDS
T11211
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-1-like
KO
K06480
integrin alpha 1
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04510
Focal adhesion
cbor04512
ECM-receptor interaction
cbor04518
Integrin signaling
cbor04810
Regulation of actin cytoskeleton
cbor04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
142075026
04518 Integrin signaling
142075026
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
142075026
09142 Cell motility
04820 Cytoskeleton in muscle cells
142075026
04810 Regulation of actin cytoskeleton
142075026
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cbor04147
]
142075026
04515 Cell adhesion molecules [BR:
cbor04515
]
142075026
04090 CD molecules [BR:
cbor04090
]
142075026
Exosome [BR:
cbor04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
142075026
Cell adhesion molecules [BR:
cbor04515
]
Integrins
Integrin alpha subunits
142075026
CD molecules [BR:
cbor04090
]
Proteins
142075026
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
Integrin_A_Ig_3
VWA_2
FG-GAP_3
vWA_SIBA-E
EIF3I
LYRIC
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
142075026
NCBI-ProteinID:
XP_074992117
LinkDB
All DBs
Position
W:complement(27816665..27871128)
Genome browser
AA seq
1173 aa
AA seq
DB search
MPFSTCTLTFFHLVGSSNVDVKNAMTFSGPLEDMFGYTVQQYENEEGKWVLIGSPLVGQP
EKRTGDVYKCPVGKDNQSPCIKLNLPAATSVPDVMEVKENMTLGTTLVTNPKGGFLACGP
LYAYKCGRLHYTTGVCSNVSSTFETVEAIAPSVQECKTQLDIVIVLDGSNSIYPWESVTA
FLNSLLKNMDIGSQQTQVGIVQYGQTAVHEFFLNTYSITEDVMAAATRIRQRGGTQTMTA
LGIDTARKEAFTEAHGARRGVQKVMVIVTDGESHDNYRLKEVIDYCEDENIQRFAIAILG
SYSRGNLSTEKFVEEIKSIASKPTEKHFFNVSDELALVTIVEALGERIFSLEATTDQQAA
SFEMEMSQAGFSAHYSQDWIMLGAVGAYDWNSTVLMVKDSDISMPTNDTFRDRLSEKNEP
LAAYLGYSVNSALTPGGILYIAGQPRYNHTGQVIIYKMEGKEVQVLQRLNGEQIGSYFGG
VITTIDINRDSFTDLLIVGAPMYMGTEKEEQGKVYVYGLNKICSFTKFEYQMSLEPIKQT
CCSLLKHDTCKVLKNEPCGARFGTAIAAVKDLNLDGYNDIVIGSPLEDDHRGAVYIYHGH
GNTISKKYTQRIASGGDGEKVKFFGQSVHGEMDLNDDGLIDVTIGGLGGTALFWSRDVAV
VNVSMQFTPKSINIQQQNCQINKRKTICINATICFKTRLKSKEDTFESSLQYWITLDSQR
QISRSLFTESHERKMQKNITIKGSECIKHNLYMLDKPDFQDSVKVLLEFNFSDPESGPVL
DSNLPNSISEYIPFTKDCGAKNKCISDLVLNVKAIIAGDSSSPFIVKSRNDKFTIQLSVK
NEKDSAYNTRVLVQYSPNIIFAGIEDIQIDSCESNHNITCKVGYPFLKPAEEISFKISFQ
FNALYLLENATIHIYATSDSEEPPETLSDNREHVTIPVKYEVGLIFVSVFKEHHVIIAAN
DTIPIAINXEQIGDEVTLHYRIENGEYFPMPGLTLQILFPNVTAAKNTLLYLTALSHSQN
AICQTSYPVDPLTISTGKPFVLPKIKEPTKDTIVDCDTYSCASINCALVPSDIFQVNVSL
RVWKSTIIKANIHSLTLVVKALLRSENSSLILRNDHQKLETMIKISKELPPGTVPLWVIL
LSIFAGLLILALLIFALWKAGFFKRPLKKKMEK
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgccattttcaacttgtaccctcactttctttcaccttgtcggctcttccaatgttgat
gtgaaaaatgcaatgaccttcagtgggcctctggaagacatgttcgggtacacagttcaa
cagtatgaaaatgaggaaggaaaatgggtacttattggttcaccattagttggccaacct
gagaaaagaacaggagatgtatacaaatgccctgtaggaaaggacaaccaatcaccctgc
ataaaactgaacttaccagctgctacttcagttcctgatgtcatggaagtaaaagaaaat
atgactcttggaacaaccttagtgactaacccgaaaggaggctttctggcatgtggacca
ctttatgcttataaatgtgggcgtttgcattacacaactggagtttgctctaatgtcagc
tccacttttgaaactgtcgaggcgattgctccgtctgtgcaagagtgtaaaacccagttg
gacatcgtcatagtccttgatgggtccaacagcatttacccatgggagagtgtcacagcc
ttcttaaacagcctcctgaaaaacatggatataggttctcagcaaacacaggttggaatt
gttcagtacggacagactgcagtccatgaatttttcctgaatacatactcaataacagaa
gacgtgatggctgcagctacaagaatacgccagcggggtggcacacaaactatgacagcc
cttggaatagatacggcaaggaaagaggcttttactgaggctcatggtgcacgacgagga
gtacaaaaagtaatggttattgtgactgatggggaatcacatgacaactacagattaaaa
gaagtgattgattattgtgaagatgaaaacattcagagatttgctattgctattcttggc
agctacagcagaggaaatttaagtactgaaaaatttgtagaggaaataaaatcaattgcc
agtaagcctactgaaaagcatttcttcaatgtctcagatgaattagctcttgtaactatt
gttgaagcacttggagagagaatattttccctggaagcaacaacagaccagcaggcagcc
tcatttgaaatggaaatgtctcaagctggtttcagtgctcattactctcaggattggatc
atgcttggagcagttggagcatatgactggaacagcacagtgctcatggtgaaggacagt
gatatttcaatgccaactaatgacacttttcgtgacaggctttcggaaaaaaatgaaccc
cttgcagcctatctaggatatagtgtgaattcagcattgacacctggaggcatactgtac
atagcaggacagccacgatacaatcatactggccaagttatcatttataaaatggaagga
aaagaggtacaagtacttcagaggttaaatggagaacaaattgggtcatactttgggggt
gttattaccacgatcgacatcaatagggactcatttacagaccttcttattgttggagct
cctatgtatatgggaactgaaaaagaggagcaagggaaagtgtatgtttatggtctgaat
aagatctgttctttcacaaagtttgaatatcagatgagtcttgaacctataaagcaaaca
tgctgttcgctgttaaaacatgacacctgcaaagttcttaagaatgagccttgcggtgca
cgctttgggactgcgattgctgcagtgaaggatctcaatcttgatggatataatgacatt
gtaataggatctcccttagaggatgatcatcggggagctgtttatatttatcatggccat
ggcaacacaatcagtaaaaaatacacgcagcgtattgcatcaggtggagatggggaaaaa
gtgaaattttttggccagtctgtacatggagaaatggatttaaacgatgacgggctgatt
gatgttaccattggaggccttggtgggactgccctcttctggtctcgtgatgtggctgta
gtaaatgtttccatgcaatttacacccaaaagcatcaatatccaacaacaaaattgtcag
ataaataaaagaaaaacaatatgcataaatgccacaatttgttttaagaccagactaaaa
tcaaaggaagatacatttgaatccagtctgcagtattggattactcttgactctcaaaga
caaatatctcgaagcttgttcacagaaagccatgagaggaaaatgcaaaaaaatataact
atcaaagggtcagaatgtattaaacataacttgtacatgttggataagcctgactttcag
gactctgtaaaggttttgctggagttcaatttttctgatccagagagtggacctgttctt
gatagcaacctgccaaattcaatatctgaatatattcctttcacaaaagattgtggagcc
aaaaataaatgcatttcagatcttgttttgaatgtaaaagcaatcatagctggagacagc
tcttctccattcattgtaaagtcacgcaatgataagttcaccatccagctctctgtcaag
aacgaaaaagacagtgcctataataccagagttttggttcagtattctccaaatattatt
tttgctggcattgaggatatacagatagatagttgtgaatctaatcacaacatcacctgt
aaagtgggatatccatttctaaaacctgcagaagagatttccttcaaaatatcattccaa
ttcaatgcattgtatctcctggaaaatgctaccattcatatatatgcaacaagtgatagt
gaagaaccacctgagaccttgagtgacaacagagaacacgttacaattccagtaaaatat
gaagtaggattaatatttgtaagtgttttcaaagagcaccatgttataattgcagcaaat
gataccatccctattgctattaacnnagagcagattggggatgaagttactctgcattat
aggattgaaaatggtgaatactttccaatgccaggcctcacactgcagatcttatttccc
aatgtaacagcagccaagaatactcttctctaccttactgcattgtcacattcccaaaat
gccatctgccaaactagttaccctgtagatcccttaacgatcagcactgggaaaccattt
gtgttgccaaaaataaaagaacctacaaaggatacaattgtggactgtgatacatacagc
tgtgcatctattaattgtgccctggtcccatctgacatatttcaagtgaatgtttcatta
agagtatggaaatctacaatcataaaagcaaatattcacagcttaacccttgttgtgaaa
gctttacttaggagtgaaaactcatcactgattttaagaaatgaccatcaaaaactggag
accatgattaagatttccaaagaactcccaccaggtacagtccccttatgggttatcctc
ctgagtatctttgctggactcttgattcttgcactgcttatatttgctttgtggaaggct
ggatttttcaagagaccgctaaagaagaaaatggagaaatga
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