Calonectris borealis (Cory's shearwater): 142075115
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Entry
142075115 CDS
T11211
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbor03021
]
142075115
03036 Chromosome and associated proteins [BR:
cbor03036
]
142075115
Transcription machinery [BR:
cbor03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
142075115
Chromosome and associated proteins [BR:
cbor03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
142075115
SLIK complex
142075115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
DEAD
Motif
Other DBs
NCBI-GeneID:
142075115
NCBI-ProteinID:
XP_074992237
LinkDB
All DBs
Position
W:53923143..53994394
Genome browser
AA seq
1798 aa
AA seq
DB search
MNGHSDEDIVRNSSGESSQSDDDSGSASASGSGSSSGSSSDGSSSQSGSSDSESGSESGS
QSESESDTSREKKQVQAKPPPKADGSEFWKSSPSILAMQRSAVLKKQQQQKAASSDSGSE
EDSSSSEDSADDSSSETKKKKHRDEDWQMSGSVSGTGSDSESEEDREKSSCEDSESDYEP
KNKVKSRKPPSRTEPKSSKKIAGQKKRQLDSSDDDDYDKRGSRRQATVNVSYKEAEETKT
DSDDLLEVCGEDVPQPEEDEFETIEKFMDSRIGRKGATGAATTIYAVEADGDPNTGFEKS
KELGEVQYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDQETKRWLKNASPED
VEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWEDGALIA
KKFQACIDEYFSRNQSKTTPFKDCKILKQRPRFVALKKQPSYIGGHESLELRDYQLNGLN
WLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQ
TWAPQMNAVVYLGDITSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKSFLGGLNWVF
IGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWED
FEEEHGKGREFGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWIL
TRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQHLIRSSGKL
ILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHF
NAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIY
RLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPSSSTPFNKEELSAILK
FGAEELFKEPEGEEEEPQEMDIDEILKRAETRENEPGPLTVGDELLSQFKVANFSNMDED
DIEFEPEQNLRNWEEIIPEVQRRRIEEEERQKELEEIYMLPRMRNCAKQISFNGSEGKHS
RSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLERLDA
IARDAELVDKSETDLRRLGELVHNGCIKALKDNSFGQERAGGRLGKVKGPTFRISGVQVN
AKLVISHEEELAPLHKSIPSDPEERKRYVIPCHTKAAHFDIDWGKEDDSNLLIGIYEYGY
GSWEMIKMDPDLSLTQKILPDDPDKKPQAKQLQTRADYLIKLLNKDLARKEAQRLTGAGN
SKRRKTRTKKNRATKAAKIKEEIKSDSSSPPSEKSDEDDEDNEDEIVSVKHPHKKIKAEK
ENEEKPEPDIGIKKEAEEKRETKEKENKRDLKREKKEKEDKKELKNIKEKRENKVKESTQ
KEKEVKEEKVNEIKSENKEKNKKVSLLDIPVHITATSEPVPISEESEELDQKTFSVCKER
MRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQIKQWRKNLWI
FVSKFTEFDARKLHKLYKHAIKKRQESQQHSDQNISSNVNTNVIRNPDVERLKENTNHDD
SSRDSYSSDRHLSQYHDHHKDRHQGDAYKKSDSRKRSYSAFSNGKDHRDWDHYKQDSRYY
SDSKHRKLDDHRSRDHRSNLEGSLKDSRPHSDHRSHSDHRIHSDHRSTSEYSHHKSSRDY
RYHSDWQMDHRASGSGPRSPLDQRSPYGSRSPLGHRSPFEHSSDHKSTPEHTWSSRKT
NT seq
5397 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggcacagtgatgaagacattgtaagaaacagtagtggagagtcaagccaatca
gatgatgattctgggtcagcatcagcttctggatctggttcaagctctggaagcagtagt
gatggaagtagcagtcaatcaggtagcagtgactctgagtctggttcagagtcaggcagt
caatcagaatcagagtctgacacatctagagagaagaaacaagttcaagctaaaccacca
ccaaaagctgatggatctgagttttggaagtccagtccaagtatacttgctatgcagaga
tcagcagtgctcaagaagcaacaacagcagaaggcagcctcatcagacagtggttcagaa
gaggattcatcgagcagtgaagattctgcagatgactcttccagtgaaaccaagaagaaa
aaacatagagatgaagactggcaaatgtcagggtcagtatcaggaactggttctgattct
gaatcagaggaagatagagagaaaagcagttgtgaagatagtgaatctgactatgagcca
aaaaacaaggtcaaaagccggaaacctccaagcagaactgagccaaaaagcagcaaaaag
attgcaggacagaaaaagaggcagcttgattcatcagatgatgatgactatgacaagaga
ggatctcgtcgccaggcaacagtcaatgttagttacaaagaagctgaagaaaccaagaca
gattctgatgacttgttggaagtttgtggagaagatgtcccacagcctgaagaagatgaa
tttgaaactatagagaagtttatggatagtcgaattggccgaaaaggagccactggtgct
gcaactaccatctatgcagttgaggcagatggtgacccaaatactgggtttgaaaagtca
aaggagctaggagaagtacagtatcttattaaatggaaaggctggtcacacatccataat
acttgggaaactgaggaaacactgaagcaacaaaatgttaaaggaatgaagaaactggac
aactataagaaaaaggatcaggaaacaaaacgctggctgaaaaatgcttctccagaagac
gtggaatattataactgccagcaggaacttacagatgatctacataaacagtatcaaata
gtggaaaggataattgctcattcaaatcagaaatcagcagctggttatccagattactat
tgcaaatggcagggtctgccttactcagaatgtagctgggaagacggtgctctcattgcc
aaaaaatttcaggcgtgtattgatgagtattttagcagaaatcaatccaagaccactcca
tttaaggactgcaagatcctaaaacagaggccgaggtttgttgcactaaagaagcaacca
tcttatattggaggacatgagagtttagagttaagagattatcagttaaatggactgaac
tggcttgctcactcgtggtgcaaagggaatagttgtattcttgcagatgaaatgggtctg
ggtaaaacaatacaaacaatttcttttctgaactacctgtttcatgaacatcaactgtat
gggcctttcttgctagtcgtgccactttctaccttgacatcttggcaaagagagattcaa
acttgggctcctcagatgaatgctgtggtttacttaggagatataactagcagaaatatg
ataagaactcatgaatggatgcatccacagaccaagcgattaaaatttaatatacttcta
acaacttatgaaattttgctgaaggataagtcattccttggtggtctgaattgggtattt
ataggagttgatgaagctcatcggttaaaaaatgatgattcccttctgtacaagacttta
atagactttaagtctaatcatcgtcttcttattactggaacccctctgcaaaactccctc
aaagagctttggtctttgctgcacttcatcatgccagaaaagttttcttcctgggaagat
tttgaagaggagcatggcaaagggagggagtttggttatgcaagtcttcacaaagaactt
gaaccatttctactcagaagagttaaaaaagatgtagaaaagtctttacctgctaaggtt
gaacaaattttgaggatggaaatgagtgcattgcagaagcaatattacaagtggatttta
accaggaattataaagccctgagtaaaggttcaaaaggcagtacctcaggctttttgaac
atcatgatggaactcaagaagtgttgtaaccattgctacctcattaaaccaccggatgat
aatgaattctataataaacaggaggccttacagcatttaatacgtagcagtgggaaatta
atccttcttgacaagctactgattcgtctacgagaacgtggcaacagagtactgattttc
tctcagatggtgaggatgctagacatcctagcagagtatttgaagtatcgtcagtttccc
tttcagagacttgatggatcaataaaaggggaattgaggaaacaagccctggatcatttt
aatgcagaaggatcagaggacttctgctttttgctgtctaccagagctggaggattaggt
ataaacttggcatctgctgacactgtagttatatttgattctgactggaatccacagaat
gatctgcaagcgcaggctagagctcataggattggacagaagaaacaggttaatatttat
cggctagtcacaaaaggatcagtagaagaagatattcttgaaagagctaagaaaaagatg
gtgttggatcacttagtaattcagagaatggacactacagggaaaactgtactacataca
ggctctactccttccagctcaacaccttttaataaggaagagttatcagcaattttgaag
ttcggtgctgaggaactttttaaagaacctgaaggggaagaagaggagcctcaggaaatg
gatatagatgaaatcttgaagagggctgaaactcgagaaaatgagccaggcccactaact
gtaggagatgagttgctttcacagttcaaggtggctaacttttccaatatggatgaagat
gacattgagttcgaaccagaacaaaatttaagaaactgggaagaaatcattccagaagtc
cagcgacgacgaatagaagaggaggaaagacaaaaagagcttgaagaaatatatatgctc
ccaaggatgagaaactgtgcaaaacagatcagctttaatggaagtgaagggaaacacagt
aggagcagaagatattctggatctgatagtgactccatctcagaaagaaaacgaccaaaa
aaacgtggacgaccacgaactattcctcgagaaaatattaaaggatttagtgatgcggag
attaggcggtttatcaagagttacaagaaatttggtggcccacttgaaaggttagatgct
atagctagagatgctgagctagttgataaatctgagacagaccttagacgtctgggagaa
cttgtacataatggatgcattaaggctttaaaggacaattcctttggacaagaaagagca
ggaggtagacttgggaaagttaaaggcccaacattccgaatatcaggagtgcaggtgaat
gcaaagctagtcatctctcatgaagaagagttggcaccattgcacaaatccattccttca
gatccagaagaaaggaaaagatatgtcatcccatgccacaccaaggcagctcattttgat
atagattggggtaaggaagatgattccaatctgttaataggtatctatgaatatggctat
ggcagctgggaaatgataaaaatggatcctgatctcagtttgacacagaagattttacct
gatgatccagataagaaaccccaggccaagcagttacagacccgtgcagattacctcatt
aaattactgaataaagaccttgcaagaaaagaagcgcaaagacttactggtgcaggcaat
tcaaagaggaggaaaacaagaactaagaagaatagagcaacaaaggctgcaaaaattaaa
gaagaaataaaaagtgactcctcatcaccaccctcagaaaaatctgatgaagatgatgag
gataatgaggatgagattgtttcagtgaaacatccacataaaaaaataaaagcagaaaaa
gaaaatgaagaaaagcctgagccagatattggtataaagaaggaagctgaagaaaaaaga
gagacaaaagaaaaagaaaataagagggatttgaaaagggagaaaaaagaaaaagaggat
aagaaagaattaaaaaatattaaagaaaagagagaaaacaaagtaaaagaatccacacag
aaagaaaaagaagtaaaggaagaaaaggtaaatgaaataaaatctgaaaataaagaaaaa
aataaaaaagtttcattgttggatattccagttcatattactgcaactagtgaaccagtt
cctatatctgaagaatctgaagaactggatcagaagacattcagtgtgtgcaaagaaaga
atgaggcctgtcaaagcagcattgaaacaactggatagaccagagaaaggcctttctgaa
agggaacagctggagcatactagacagtgcctaatcaaaattggggaccacattactgaa
tgtctaaaggagtacacaaatcctgaacaaattaaacagtggagaaaaaacttgtggatt
tttgtctctaagtttacagaatttgatgccagaaagctacacaagctctataaacatgca
atcaaaaaacgccaagaatctcagcaacacagtgaccagaatattagcagcaacgtgaat
acaaatgtaattagaaatccagatgttgaaagactgaaagagaatacaaaccatgatgac
agtagcagggacagttattcttctgatagacatttgtcacaataccatgatcatcataag
gacaggcatcagggggatgcttataagaaaagtgactctaggaaaaggtcctattcagcc
ttcagcaatggaaaagaccacagagactgggatcactataaacaagacagcagatactat
agtgatagtaaacataggaagttggatgaccacaggagcagagatcacaggtcaaacctg
gaaggaagtttaaaagacagtcggcctcattcagatcaccgttcccattcagaccacagg
atacattcagatcaccgttccacttcagagtacagccatcataaatcttccagagattat
aggtaccactcagactggcaaatggaccacagagcttctggtagtggcccaaggtcacca
ttagatcagaggtctccttatggttcaagatctcctttaggacacagatctccatttgaa
cactcatcagatcacaaaagtacacctgaacatacatggagtagccggaaaacataa
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integrated database retrieval system
