Calonectris borealis (Cory's shearwater): 142075156
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Entry
142075156 CDS
T11211
Symbol
RNF180
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180 isoform X1
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cbor04121
]
142075156 (RNF180)
Enzymes [BR:
cbor01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
142075156 (RNF180)
Ubiquitin system [BR:
cbor04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
142075156 (RNF180)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-C3HC4_3
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
142075156
NCBI-ProteinID:
XP_074992280
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All DBs
Position
Z:complement(64007124..64093517)
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AA seq
566 aa
AA seq
DB search
MSDQEADVLRCWRCRKYIANSVCLAKCHGKEPSKTSQPSAAQVSCNVWHVNLEAIPEWVK
CVIEKAQWTIGKLHCPFCETCLGGFNFVCNTKCSCGQLVNIHFCKSRTDYQPAFSVKLAK
SSGKHLPLLKIQSGFSKDTCHEVVTATLEIKNQGLSYRARNNNGTGRLTEALCLEVRAPR
FEMKSKKLPLKVLNQKRNLSASYPMNDTCTVKPFHRRSRSLDLNIRERLVLSPALHETCS
MGTIYHGQNENPPVYTQSGLQLESDRKDGSSFQDLYSSSADKLQKRFRITSLTTLLHRET
ESECDFEDTGQSSGSAVADGSPFVMNLSSPTSAVEEERYITPVGLVQSTSISFNQKLNKR
ERNKLKSLRRKQRRQERWLQKQTASDNLHTDDEHELRGDKESYLCAVCLDVYFNPYMCYP
CHHIFCEPCLRMLAKDNPASTPCPLCRATIARVFFQTELNNSTKSFFPTEYLKLKENFQK
SNSAKWPLPSCKKAFRVFEAGFQRRSDTVTRRHFPHAAHRMDYMDFEDDSRGWRFDMDMV
IIYIYSVNWVIGFIVFCFLCYFFFPF
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatcaagaggctgatgttctacgttgctggagatgcagaaaatacatagcaaat
tctgtttgccttgcaaaatgtcatggaaaagaaccatccaaaacatcacaaccttccgct
gctcaggtgtcttgcaacgtatggcatgtgaacttagaagccattccagagtgggtgaaa
tgtgtcattgaaaaggcacagtggacaattggaaaactgcactgtccattctgtgagacc
tgcttagggggctttaactttgtttgcaacacaaaatgttcctgtggacagttagtaaat
atacatttctgcaaaagtcggactgactatcagccagctttctctgttaaattggcaaaa
tcatcaggaaaacacttacctctcctcaaaattcagtctggttttagcaaggatacctgc
catgaagtggtaactgcaactttggaaataaaaaatcaagggctttcatacagggctaga
aataataatggtactggaagattaacagaagcactttgtctggaagtaagagctcccaga
tttgagatgaaaagtaaaaaacttcccttaaaggtattaaatcaaaaaaggaatctttct
gcttcctatcctatgaatgatacatgcactgtaaaaccttttcacagaagatcgcgtagt
ttggatttaaatatcagagagagacttgttttgtcacctgcgttacatgaaacttgcagt
atgggaacaatttaccatggccaaaatgaaaatccacctgtttacacacaaagtggcttg
caattagagtccgatcggaaagatggtagttcttttcaggacctatatagttccagtgct
gacaaactacaaaaaaggtttcgaattacttcccttaccacattactacatagagaaaca
gaaagtgagtgtgattttgaagatactggacaatcttctgggagtgccgttgctgatgga
tcaccttttgtgatgaacctttcttcacctacaagtgctgtagaagaggaacgatacatc
acacctgttggtcttgtgcagtctacgagtatttccttcaaccaaaagctgaataagaga
gaaagaaacaagctgaaaagcttgaggagaaaacaaagaaggcaagaacgatggctacag
aagcaaactgcaagtgataacctgcatacagatgatgagcatgaacttagaggagataaa
gaaagctatctctgtgcagtgtgcctggatgtttatttcaatccttacatgtgctatcca
tgccaccacatcttttgtgaaccttgcttaaggatgcttgccaaagacaatccagccagc
actccatgtccactgtgtcgcgctacaattgccagagtctttttccaaacagaactgaac
aactctaccaaatcttttttccctacggaatatttgaagttaaaagaaaattttcaaaaa
tcaaattctgcaaaatggcctctaccaagctgcaagaaagccttcagagtttttgaagca
ggttttcaaagacgctcagatactgtaacaaggaggcatttcccacatgctgctcacagg
atggactacatggactttgaggatgatagccgtgggtggcggtttgatatggacatggtg
ataatctacatttattcagtcaactgggtaataggatttattgtgttctgttttctttgt
tacttctttttccctttttag
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