Calonectris borealis (Cory's shearwater): 142075241
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Entry
142075241 CDS
T11211
Symbol
TMC1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
142075241 (TMC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cbor02000
]
142075241 (TMC1)
03037 Cilium and associated proteins [BR:
cbor03037
]
142075241 (TMC1)
Transporters [BR:
cbor02000
]
Other transporters
Pores ion channels [TC:
1
]
142075241 (TMC1)
Cilium and associated proteins [BR:
cbor03037
]
Other cilia and associated proteins
Stereociliary proteins
142075241 (TMC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Na_K-ATPase
Piezo_TM1-24
COX16
Motif
Other DBs
NCBI-GeneID:
142075241
NCBI-ProteinID:
XP_074992430
LinkDB
All DBs
Position
Z:47133267..47204871
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AA seq
953 aa
AA seq
DB search
MPKHEKPTAIEGDDGSDVDKEEGSTAENEENVKGKDKWGKRATPRTRRGHVRGRARRGDE
EDEDDEDGTRRAGNRRHRNRRGRGRAAGNEGSDSDGDPAKARKNQANQKSKEDDEDEEDE
EGAKSGKGKNEKKQDKKPDKKGKKEKANKKKKDKKKSGSGSDSDSEEEPITEEELAKLKE
EVEEKKKLIATLRNKPWKMKKKLSVLKEAQLFVEKFEGALGKGKGKKFYAYKVMMTKKWM
KFQRDFENFKTACIPWEMKIKEIESHFGSSVASYFIFLRWMYGINMILFGLTFGLVMVPE
ALMGKPYGSLPRKTVPRAEEASAMNFATLWDFSGFAQYSVLFYGYYNNQRTIGWLKFRMP
LSYFLVGVGTIGYSFMIVIRTMARNANEEGGGDDTSFNFSWKMFTSWDYLIGNPETADNK
FASITTSFKEAIVEEQESRKEENIHLTRFLRVLANFLALCTLAGSGYLIFFVVRRSQKFA
LEGLENYGWWERNEVNMVMSLLGMFCPTLFDVISSLENYHPRIALRWQLGRIFALFLGNL
YTFIIALMDEINLKLEEEKIVKYNMSIWEASLYNGTIPENSTAPPIQVDPADVPRGPCWE
TMVGQEFVRLTVSDTMTTYITILIGDFLRAVFVRFFNYCWCWDLEYGFPSYSEFDISGNV
LGLIFNQGMIWMGSFYAPCLPAINVFRLHTSMYLQCWAVMCCNVPQERVFKASRSNNFYM
AMLLFILFLSTLPAVYTIVSIPPSFDCGPFSGKTRMFEVISETLEHDFPSWFGKVFGYAS
NPGLILPFILLMVLSIYYLNATSKSYKEANLELKKKLQSQAEENKRRNKQKAQKSNEQEE
NPFETESPQPKQKGGKQDESTPNQDNKKGRGGNEVKKTGQPQEASSSKPLQHPGPALNGH
YALQSRGGHLPPPAIAVTRPPGPGGYGVPGYPPGNPRFPEVQPGMPRGPPNYR
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaacatgaaaagccaaccgccattgaaggagacgatggcagtgatgttgacaag
gaagaaggcagtacagctgagaatgaagaaaatgtcaaaggaaaagacaaatgggggaag
agagcaacaccaagaaccagaaggggacatgtcagagggagagccaggcgtggtgatgag
gaggatgaggatgatgaagatgggacaaggagagctgggaatcgcaggcacagaaatcgt
agaggacgggggcgagcagctggaaatgagggcagtgattctgatggggatcctgcaaaa
gccaggaagaaccaggcaaatcagaaatccaaggaagatgatgaagacgaggaagatgag
gaaggggctaaaagtgggaaaggcaaaaatgagaagaaacaggacaaaaagcctgataag
aaagggaaaaaagagaaggccaacaagaagaaaaaagacaaaaagaaatcaggatctggc
tctgattctgattctgaggaggagccgattacagaggaggaactggccaagctgaaggaa
gaggtagaagaaaaaaaaaaactaatcgccacgctacgaaacaagccatggaagatgaaa
aagaagttgtctgtcctgaaggaagcccagctttttgttgaaaagtttgagggtgctctt
ggaaaaggaaaaggaaaaaaattctatgcatacaaagtgatgatgacgaagaaatggatg
aaatttcaaagagactttgagaattttaagacagcctgcataccctgggaaatgaaaatt
aaggagattgaaagtcactttggctcatcagtagcatcttatttcatcttcttgcgatgg
atgtatggaataaacatgattctctttggactgacctttggacttgtaatggtgcctgag
gctttgatggggaagccatatggctctttacctagaaaaactgtcccaagagctgaagaa
gcaagtgctatgaactttgctactctctgggattttagtggctttgcacagtattctgta
ctcttttatggttattacaataaccagaggacaattggatggctcaagttcagaatgcct
ctttcctatttccttgttggagttgggactattggctacagctttatgattgtcattcga
acaatggcaaggaatgcaaatgaagaaggtggtggggatgatactagttttaatttcagc
tggaaaatgttcacaagctgggactacctgattggcaatcctgagacagcagataataag
tttgcctccatcacaacaagctttaaggaagctatcgtggaggagcaggaaagccgaaaa
gaggaaaatattcacttgactagattcctgagggttcttgctaacttcttagccctatgc
acacttgctgggagtggctacctcatcttttttgttgtcagaagatcccagaaatttgcc
ctggaaggtctggagaactacgggtggtgggaaagaaatgaagtgaacatggttatgtca
cttttaggaatgttctgcccaactttatttgatgtaatcagttctctggaaaactaccac
cctcgaatagctctaagatggcagctgggaagaatctttgctctttttcttggcaatctc
tacactttcattatcgccctaatggatgaaatcaatctcaagttggaagaagaaaagata
gtcaagtataacatgtcaatatgggaagccagcctgtacaacggtactattccagaaaat
tcgactgctcctccaatacaggtggaccctgcagatgtccccagaggaccatgctgggaa
acaatggtaggacaggaattcgtgcggctgacagtctctgatacaatgacaacatacatc
acaattctaattggtgatttcttgagagctgtcttcgttagatttttcaattactgctgg
tgctgggacttggagtatggatttccatcatattctgaattcgatataagtggaaatgtg
ctgggactgatcttcaaccaaggcatgatctggatgggatctttttatgctccatgtctc
ccagcgatcaacgtgttccgcctccacacttcaatgtacctgcagtgctgggcagtgatg
tgctgcaatgtcccccaagagagggtcttcaaggcttccagatctaataacttctacatg
gccatgctgcttttcatcctctttctttccacactgcctgctgtgtacaccattgtctcc
atcccaccatcttttgactgtggtcctttcagtgggaagactagaatgtttgaagtcata
tcagaaactctggagcatgacttcccttcctggttcgggaaggtgtttggttatgcctct
aaccctggactcatcctaccttttatattgctgatggtcctgagtatttattatctcaat
gctacatctaaatcatacaaggaagcgaacttggaacttaaaaagaagctacaaagtcaa
gcagaagaaaataaaagaagaaataaacaaaaggcacaaaaatcaaatgaacaagaggaa
aatccatttgagacagaatcaccacagccaaagcaaaaaggaggcaagcaagatgaatcc
actccaaaccaagacaacaagaaaggacggggtggcaatgaagtgaagaagacaggccag
ccacaagaagccagctcctctaagccactccagcatccaggccctgccctgaacggccac
tatgccctgcagagcagaggaggacaccttcccccaccagccatagctgtgacgaggcca
ccggggcccggggggtatggagtgccaggctatccacccggaaacccacgcttcccggag
gtgcagccaggaatgcccaggggccctcccaactacagataa
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