Calonectris borealis (Cory's shearwater): 142075486
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Entry
142075486 CDS
T11211
Symbol
SKP2
Name
(RefSeq) S-phase kinase-associated protein 2
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04068
FoxO signaling pathway
cbor04110
Cell cycle
cbor04120
Ubiquitin mediated proteolysis
cbor04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
142075486 (SKP2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
142075486 (SKP2)
04150 mTOR signaling pathway
142075486 (SKP2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
142075486 (SKP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cbor04121
]
142075486 (SKP2)
Ubiquitin system [BR:
cbor04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
142075486 (SKP2)
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Motif
Pfam:
F-box-like
F-box
LRR_6
LRR_At5g56370
F-box_5
Motif
Other DBs
NCBI-GeneID:
142075486
NCBI-ProteinID:
XP_074992981
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Position
Z:complement(73642393..73655244)
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AA seq
422 aa
AA seq
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MHRKHLQEIPSSSSNVSSSFTWDWDWDSSKTSEFLSGMGVSVLKKDKLGNENTPQDLLVS
SPCPPQKRQKVKEKEKDFVIVRRPRLLREAESGVSWDALPDELLLAIFAYLPLNDLLKVS
LICKRWHRLSFDESLWQTLDLTGRNLLPGVIGQLLPAGVTVFRCPRSCIGNPLFKTSKPL
RVQHMDLSNCTVSVADLQSILCLCERLHNLSLEGLVLSDDIIKSIAKNPSLMRLNLCGCS
GFSAEALELMLSSCSMLEELNLSWCDFTATHVKAAVNHVTSKVTQLNLSGYRQNLQIPDI
KTLVERCPFLVHLDLSDSVMLKPECFQYFRQLNFLQDLCLSRCYQISPAALVELGEIPTL
KTLQVFGIVTDSSLQLLQETLPDMKINCSHFTSIARPTIGSKKNHEIWGIKCRLTLRNPS
GL
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgcacaggaaacacctccaggagatcccatcctccagcagcaatgtttccagcagcttt
acctgggactgggactgggactccagcaagacctcagagtttctctcgggcatgggagtg
tctgtccttaagaaggacaagctgggcaatgaaaacacgccgcaggacctgctggtgtca
tcgccctgtcctcctcagaaacggcagaaggtgaaggagaaggagaaggactttgtcatt
gtgcgccggcctcggctgctccgagaggcagagtcaggtgtttcttgggatgcacttcca
gatgaattgcttttggcaatctttgcatatttgcccctaaatgacttgctaaaggtttcc
ctgatttgcaagagatggcatcgtctttcgtttgatgaatctctctggcagactctcgat
ctgactggtagaaatctgctgccaggagtgattggacagttgctgcctgcaggtgttact
gtattccgctgcccaagatcctgtattggaaatccgttgtttaaaacaagcaaacctctc
agagttcaacatatggatttgtcgaactgcacagtgtctgttgcagatctccagagtatt
ctttgtctgtgtgaaaggctgcacaacctcagcttggagggactagtgctttctgatgac
attatcaagagcattgctaagaatcccagtttgatgcgactaaacctctgtgggtgctca
gggttttctgcagaagccttggagctgatgttgagcagctgttctatgttggaggagctt
aacttgtcctggtgtgacttcacagccacccatgtcaaagcagcagtcaatcatgttact
tcaaaagtaactcaattaaatttaagtggatacagacagaatctacaaataccagacatt
aaaacactggtggaaagatgtccttttctcgtccatttagatctaagtgacagcgtgatg
ttaaagcctgagtgcttccagtattttcgtcaactcaactttctacaagatctgtgtctt
agccgatgttatcagatatcaccagctgccttagtagaacttggtgaaattccaacatta
aagactcttcaggtatttggaatagtgactgatagctccctacagctcctccaggaaacg
cttcctgacatgaaaatcaattgttcacactttacaagtatcgcaaggccaactattggc
agtaaaaagaaccatgagatttggggcatcaaatgcagattgacgctgagaaatcctagt
ggcttatga
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