Calonectris borealis (Cory's shearwater): 142076045
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Entry
142076045 CDS
T11211
Symbol
SOX21
Name
(RefSeq) transcription factor SOX-21
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbor03000
]
142076045 (SOX21)
Transcription factors [BR:
cbor03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
142076045 (SOX21)
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Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
TGF_beta_GS
Motif
Other DBs
NCBI-GeneID:
142076045
NCBI-ProteinID:
XP_074994501
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All DBs
Position
1:162865296..162868280
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AA seq
281 aa
AA seq
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MSKPVDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLLKKDKFAFPVPYGLGGVADHEHPHGLKAGGLHGG
AAGGLVPESLLANPEKAAAAAAAAAARVFFPQSAAAAAAAAAAAAASSPYSLLDLGSKMA
EISSSSSSSGSGLPYASSLGYPGAGGAGAFHGAAAAAAAAAAAAGGHTHSHPSPGNPGYM
IPCNCSAWPGPGLQPPLAYILLPGMGKPQLDPYPAAYAAAL
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagccggtggaccacgtcaagaggccgatgaacgccttcatggtgtggtcgcgg
gcgcagcggcggaagatggcccaggagaaccccaagatgcacaactcggagatcagcaag
cgcctgggcgccgagtggaagctgctgaccgagtcggagaagcggcccttcatcgacgag
gccaagcggctgcgcgccatgcacatgaaggagcaccccgactacaagtaccggccccgg
cggaagcccaagacgctgctgaagaaggacaagttcgccttccccgtgccctacgggctg
ggcggcgtggcggaccacgagcacccgcacgggctgaaggcgggcgggctgcacggcggg
gcggccggcgggctggtgcccgagtcgctgctggccaaccccgagaaggcggcggccgcc
gctgccgccgccgccgcccgcgtcttcttcccccagtcggccgccgccgctgccgccgcc
gctgccgccgccgccgccagcagcccctactccctgctggacctgggctccaaaatggcc
gaaatctcctcctcctcctcttcctcgggctcggggctgccctatgcctcttcgctgggc
taccccggcgccggcggggcgggcgccttccacggggccgccgctgccgccgccgccgcc
gcggccgccgccggggggcacacgcactcgcacccgtcgcccggtaacccgggctacatg
atcccctgcaactgcagcgcctggcccggcccggggctgcagccgccgctggcctacatc
ctcctgccgggcatgggcaagccccagctggacccttaccccgcagcctacgccgcggcc
ctatga
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