Calonectris borealis (Cory's shearwater): 142076550
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Entry
142076550 CDS
T11211
Name
(RefSeq) spectrin beta chain, non-erythrocytic 5-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04517
IgSF CAM signaling
cbor04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
142076550
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
142076550
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cbor04812
]
142076550
Cytoskeleton proteins [BR:
cbor04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
142076550
Intermediate filaments
Intermediate filament-binding proteins
142076550
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
CAMSAP_CH
SR_desmoplakin_3
Motif
Other DBs
NCBI-GeneID:
142076550
NCBI-ProteinID:
XP_074994949
LinkDB
All DBs
Position
Unknown
AA seq
2921 aa
AA seq
DB search
MGTEYEKDHIKKLQEQRMSMQKKTFTNWMNNVFFRNNVKVEIEDIYTDLKDGICLMQLLE
LLSGEALPRPNRGKMRVHFLENNSKAITFLKSKQVQVKVIGPENIVDGDRTLILGLIWII
ILRFQISSIKLDKEEFGGKADVLFANEALLLWCQHKTASYSNVNVKDFSKSWSDGLAFNA
LIHAHRPDLIHYSSLRQDQPIKNLNNAFNVAEKELGISKLLDAEDVAVPYPDERSIMTYV
SLYYLYFSRLKQGQTVQKRLTKIMFFLKEIDDLKLLYEQMVSDLLKWIKQKVTELDDRHF
PNSFQEMWLLMANFKTFRTVEKPPKYQEKGMIEAHLFNIRTKQRANNQRPYLPPEGRMLQ
DVEKHWIILEKAEHNRGKALQKEMLRLERLEQLAQRFLKKAALRESYLEDMRNVIGKQDF
WPESADRMEAASKKLEAIVADVLPRRERFTALDKMATVISQENYHGKDQIMKKQNSISKQ
WQDLLDQLQRRQHSLGKMQEILGLLRDIDAITEELKELQVLVNSQDCGKQLLEVVDLLQK
HNLVDSQISSYDDRLTHITQRTAEISKDSTDKPEMLYAKVQMLRQLYQNLIAMSKSRKSQ
LEDALKLFEFFRDCKEEESWISEKWKLARTTTLGKDVSQITASIQKHKALEAECNSHRAL
CADVMRRGWELSQKNPARQEDILRQTNNLQKLWQQLQDEVADRKSRLQAAALIKQYFADI
DEANSWLRERQPLLASKDYGKDESSAEALLHRHLRLEKEIAAYSSEMRRLKEQADIAAEQ
APAAMVKTEASSDLNQKTTKLPFSRTWATSETAFPGTSSPDVHFLPENIWKTQNEIDSLY
ENLQSMAEDRKKALEEMIGYYRFCSSCEEFQSWMKVKENIFRTLQPQADNVEVMQQKYQS
FLMELAAGKSQLGDIENLAIKYGKISPSKYSEIQIWLEEINSRWERMETLKEEKGSELIG
VADVRTFLQDCQSIGVLLEDKMVQLRDLEPGNSPAGLESDKRKLSSVEREVLVIERKIEY
LRSVAKSIKDTNPAESRAITEQVENMERLLAKLKLETQKKRDILQQAQNQQSFLQDSRRL
LLWAEGIREKLSSEEMGVDVASAEQLLKEHQDLLKEIRSQKERFVQLEELGRKVIHKQPS
NSRTVDVYQSMERLAEENKELEKMWEQRRKKLQDGLELQKFNREGDRINAALSGHEAFLR
GHDLGDHVDAVRSLLKQHQEFEQLLMALKRRIEALNENGVNLIESRHFASHVIEQRMVTL
RRRWERLIQSNAERKQRLFDSLQLQEFNRDAAEILIWMEEKYKIASDESYRDPTNVLRKL
KWHEAAEKEMMANEEHFATLIKKGNQLIQENHYAAVSIQEKMSELQKKWKKLYGKMIERG
DKLRQAGQQEQLMELLQDAKKKIEKIEKVLQESETGHDLRSSRDLLKQHRQLENETRELA
EKMNSIVSHARKMATNHFDSQRILDETQKYLKRFESLQAPLDERRKLLEAAVDLYEFYHY
HDMELNWINERLPIAHSTNCGKSLDVAQSLLQKHKELQAEVNAHKQQVQRVLDKGKTMIV
GQHPSAQKISEKCHELVTAWQGLEKACEERMKQLQHSVGFQEFLMNTSDLEAWIAEKHPL
VTSKDYGKDEDGTLKLLKKHKALEHEIAIYQNLMKELSESAQTLPLVGSIQYVEVDAPKE
QVHSRLQELQELAAARRKKLDETLVLHEFLREYEDLQYWITQQKQTASSEDYGNYYEHVL
QLCAKYDTFQHQLEAAGKRVVACQQLADNLLNCGHSESREIRQKQKELRNSWEELLEITR
LRGERLRDAEAIHKCYQDLTDALAHIEEKSKSIPDDVAKDMRGVQTQLRNHVALEHELSG
NEQQLQELIQSADHVLTHCSKKQVEDLKAKQQAIVTNWKALKAKVELRKKLLEQAYKLYQ
FQAHVWDYFSWTAEIIREMRAKETIRDISTSSLRLTQHQQLLTEIEAREEKYNHVVQLGQ
SLLQDEEMGSKEIQQKLQALLEEKENVYNEWKQKKEWLEKIHQEQMFYKDWDHLDMLLNS
QEIYLKSSDLGSSVDEVEQLIRKHEAFEKLLASQDEKMMSLQEQASRLEKVGGLEGLKIQ
HKLNAICERKQQIKDLSQSRREKLQTALLLALFYQNLEEAEDWISERMQKLEDPSIQDPS
NLQDKMKLLQKHQVFEAEILANEEIITAVNKKGEALVSKGHPKSGEIRRRVRMLQERWEK
LKRAVAARGKMLEDSRDFLEFLQKVDQVEAWIREKEVMINVGDVGNDYEHCLQLMKKLNE
FRGATSGETTVDDAHIRAINALAMKLERQNKEETKTIYERRKQLNEKWNSFHGNLNAYRK
KLEGALEVHALIREIDDITERITEKSVLIQALDYGKDVESVENLIRRHEEMEREIRVIKS
KMEPLELESFRLSTRNPSINDKLTMKQQEMKNNWLRLQGQAKQRKEKLAASYQLQKFNLE
MKEMLDWTQNIRGLMEAGGLPKSANEAESMMEEHQERKEEIEARVERFNSLSNYGQELAN
SGHYATPEIHQSLSRLQQAWSELIQAWQEQHIKLFQAQDLQKFYGYVEQTESWLSSKEAF
LANEDLGDSVSSVESLQRKHTQFEKALEAQMEKIDEMASFALQLTQNKHYDSDNITNRCQ
AVLRRKEKLLENAAARRHLLEESRLLQKLLRNSFEVAAWINEKNSIAQDDSWKDPSNLQT
KLQKHQTFQAEIMANRNRLDSIKSEGEKMLRERHYAPEAIQSRLQEMEELWEELLASCQD
KRAKLQDAYKGLHFQRSVEDMEKWLEDVENELKAPYSNNDLVVLNSHLKKQEELEEDIAG
HRDRLQELVVTAQQFQKEKHFLADELEERVDQLVQRYKSLRDPLQERRGSLEASRLQYQF
FRDVDEELAWVHEKLPMASSRDYGQSLATVQSLQEKHQVMS
NT seq
8764 nt
NT seq
+upstream
nt +downstream
nt
atgggtactgagtatgaaaaagatcatatcaaaaagctgcaggagcagcgcatgtccatg
caaaagaaaaccttcaccaactggatgaacaatgtcttcttcaggaataatgtaaaggtt
gagatagaagatatttacacagacttgaaggatggcatctgtctcatgcaactcctggag
ctgctctctggagaagctttgcccagaccgaaccggggaaagatgagagtgcattttcta
gagaacaacagcaaagccatcacatttctgaaatccaagcaggtacaagtaaaagtgatt
ggtcctgagaatatcgtagatggtgatagaaccttaatcctgggacttatctggatcatt
atacttcgatttcagatttcatctatcaaacttgataaggaagaatttggaggcaaagct
gatgttctatttgccaatgaagctttactactctggtgtcagcataaaactgccagttat
tccaatgtgaatgtgaaggacttctccaaaagctggagtgatgggctggccttcaacgca
ctcatacatgctcacaggcctgaccttatccactatagctcactgcggcaggaccagcct
atcaaaaacctgaacaatgccttcaatgttgctgagaaagaactaggaatcagcaaactg
cttgatgctgaggatgtggcagtaccttacccagatgagagatccatcatgacttatgtg
tcactctattacctctacttctccagactgaaacaaggacagacagtacaaaagcgactt
accaaaatcatgttcttcctgaaggagatagatgacttgaagcttctatatgagcagatg
gtctctgacctcctgaaatggattaaacagaaggtgacagaactggatgaccgtcatttc
cccaactcttttcaggaaatgtggctgctcatggccaacttcaagaccttccgcactgtg
gagaaaccccctaaatatcaagagaagggtatgattgaagctcatctctttaacatcagg
accaagcagagagccaacaaccaacggccatacttgcccccagagggtaggatgctgcag
gatgtggaaaagcactggattatcctggaaaaggcagagcacaaccggggaaaagcactg
cagaaggagatgctgaggctagaaaggctggaacagctagcccagaggttcctgaagaag
gcagccctgcgtgagtcctacttggaagacatgaggaacgtgattgggaagcaggacttc
tggccagaaagtgcagacaggatggaggctgccagtaagaaattggaagccattgtggca
gatgtactgcccaggagggaacgcttcacagctttggacaaaatggccacagtcatcagc
caggagaactatcacggcaaagatcaaatcatgaagaagcaaaacagcatttcaaagcaa
tggcaggatcttctggatcagctgcagagacgacaacactccctgggtaaaatgcaggaa
attctgggcctcctgagggacattgatgccattacggaggagctgaaagagctgcaggtg
ctagtgaattcccaggactgtgggaagcagctcctggaagtagtagacttgctgcagaag
cacaacttggttgactcacagatctcttcctatgatgatagactgacacacatcacccag
aggacagcagaaatcagcaaggacagcacagataaaccagaaatgctttatgcgaaagtt
cagatgcttcgtcagctgtatcagaaccttatagctatgagcaagtcacgaaaatctcag
ctagaggatgctttgaagctttttgaattcttccgtgactgcaaagaggaagaatcgtgg
atctctgagaaatggaagctagcaagaacaacaacattagggaaagatgtcagccagatt
acagcctctattcagaagcataaggctctcgaagcggagtgcaattcccacagggcctta
tgtgcagatgtgatgaggaggggctgggagctgagccagaagaaccctgcacgccaagaa
gacattctgaggcagacaaacaacctccagaagttgtggcagcagctccaagatgaggtg
gctgatcgcaaaagccggctgcaggcagcagctctcatcaaacagtactttgctgacatt
gatgaagcaaattcatggttgcgagaaaggcagccccttcttgccagcaaggactacgga
aaagatgaatcgagcgccgaagcgctgttgcatcgtcacttgcgcctggagaaggaaatt
gcagcctactcctctgagatgagacgcctgaaagagcaggctgacattgcagcagagcaa
gctccagctgcaatggtgaagacagaagcctcaagtgacttaaaccaaaagacaaccaag
ctaccattcagtcgaacctgggcaacatctgaaactgcattccctggaacctccagtcca
gatgttcattttcttccagagaacatctggaagacccaaaatgaaatagattcactctat
gaaaatctacagagcatggctgaggacagaaaaaaggctctggaggagatgatcggatat
taccgcttctgtagctcttgcgaagaatttcagtcatggatgaaagttaaagagaacatt
ttccggactcttcagcctcaagcagacaatgtggaggtcatgcagcagaaataccagagc
tttttaatggaactggctgcaggcaaaagccagctgggagatattgaaaacttagccatt
aaatatggaaagatcagtcccagcaaatattctgagattcagatttggctggaagagatc
aacagcaggtgggaacgcatggaaactctgaaggaggagaagggctctgagctgattgga
gtggctgatgtgaggacgtttcttcaggactgtcagagcataggagtactactggaagac
aagatggtccaactcagggatctggaaccagggaactcacctgctgggctggagtcagac
aagcgcaaactgtcttcagttgagagagaggtcctggtgatagagaggaaaattgaatac
ttgaggagtgttgcaaaatcgattaaggacaccaaccctgcagagagcagggccatcact
gagcaggtggagaacatggagaggcttctggcaaagctaaagctggagacccaaaagaag
cgggacattctgcagcaggcccaaaatcaacagtcattcctgcaagacagccgcaggcta
ttgctgtgggcagaaggcattcgggagaaactgagcagtgaagaaatgggtgtggacgtg
gcttctgcagagcaattgctgaaggaacatcaggacctgctgaaagaaattaggtctcag
aaagaaagatttgtgcagctggaagagctagggcgcaaagtaatccacaaacaacccagt
aacagcaggaccgtagatgtctaccagtccatggagaggcttgccgaggagaacaaagag
ctggagaaaatgtgggaacagcgacggaaaaagctgcaggatggcctggaattgcagaag
ttcaacagggagggagaccgtatcaatgcagccctctctggccatgaggcctttctccgg
gggcatgaccttggggaccatgtagatgctgttcgaagcctgctgaagcaacatcaggaa
tttgaacaactgctgatggcactgaagagacgaattgaagcacttaatgaaaatggggtg
aacctaatagagagcaggcactttgcgtctcatgttattgaacagagaatggtcactctc
cggcgaaggtgggagcggctgatacaaagcaatgccgagagaaaacagaggttgttcgat
tccctacagctgcaggagtttaatcgtgatgctgctgagattttgatatggatggaagag
aagtacaagattgcatcagatgaatcctatcgtgatccaacaaatgttctacgcaaactg
aagtggcatgaggctgctgagaaggaaatgatggctaatgaggagcactttgcaacactg
ataaagaagggaaatcaactgatccaagagaaccattatgccgcagtttccatccaggag
aagatgtcagagcttcaaaagaagtggaagaaattgtatggcaagatgatagagcgaggt
gacaagctgagacaagctgggcagcaagaacagctcatggaactgctgcaggatgccaaa
aagaagatagagaaaattgagaaagttcttcaggaatctgagacaggccatgatctgcgc
tccagccgtgatctactcaagcagcacagacagctggaaaatgagacacgtgagctggca
gagaagatgaactctattgtatctcatgcgaggaaaatggccaccaatcactttgactcc
cagaggattctggatgaaacacagaaatatctgaaaaggtttgaatctttgcaagcacct
ctcgatgagaggcgtaagttgctggaagctgcagtggatctctatgagttctaccattat
catgacatggaactgaactggattaatgagcgattgcctattgcccattccaccaactgt
gggaagtccttggatgtggctcaaagcctgttgcaaaaacacaaggaactgcaggcagaa
gtgaatgcccacaaacagcaagtgcagcgggtcctggataaaggaaagacaatgattgta
ggccagcacccatcagctcagaaaataagtgagaaatgccatgagcttgtgactgcctgg
caaggcttggagaaggcctgtgaggaaaggatgaagcagctgcagcactcagttggcttc
caggagtttttaatgaatacttcagacctggaggcttggatagcagaaaaacacccactt
gtgacaagcaaggactatggtaaggatgaagatggaacactgaaactcctcaagaaacat
aaggcactggagcatgagattgctatttaccaaaatttgatgaaggaactgagtgaaagt
gcccaaactcttcctcttgtgggctccatccagtatgttgaggttgatgcgccaaaggaa
caagttcattcaagactccaggagttgcaggaactagcagcagcaagaaggaagaagctg
gatgagactcttgtcttgcacgagtttctacgagaatatgaagatctgcaatactggatc
actcagcagaaacaaacagccagctctgaagactatggaaattattacgaacatgtcttg
caactttgtgccaaatatgacacgttccaacaccagttggaagcagctgggaaaagagtt
gtggcttgccagcagctggcagacaacttgctgaactgtgggcattccgagtcccgggaa
attcgtcagaagcagaaagagctaaggaattcctgggaggagctgttggaaattaccaga
ttacgaggtgagcggctgagagatgctgaggcgattcacaaatgttaccaagatctgaca
gatgctctggcccatattgaggagaagtccaaaagtattccagatgatgttgctaaggac
atgagaggtgtgcaaacccagctccggaaccatgtggccctggagcatgagctctctggg
aatgagcagcagctgcaggagctgatccaatctgcagatcatgtactgacccattgctca
aagaagcaggtggaagatctgaaagcaaagcagcaggcaatagtcaccaactggaaggcc
ctgaaggctaaagtggaactgcgcaagaaacttctggaacaagcatacaagctttaccag
tttcaggcacatgtatgggactatttctcatggacagcagaaataataagggaaatgaga
gccaaagagactattcgcgacatatctactagcagcctgagacttacccagcatcaacaa
ctactgacagagattgaagcacgcgaagagaagtataatcatgttgtacagctaggacag
tcactcttgcaagatgaggaaatgggatcaaaagagattcagcagaagctacaggctctg
ttggaagagaaggaaaatgtatacaatgaatggaaacagaagaaggagtggctggagaaa
atacaccaagaacaaatgttctacaaggattgggatcacctggacatgctcctgaattca
caggagatttatttgaaaagcagtgatctcggaagctctgtggatgaagtagagcaactg
ataaggaaacatgaggcttttgagaagcttctggcatcacaggatgagaagatgatgtct
cttcaagaacaggcaagcaggctagaaaaggttggtggactggaagggctaaagatccag
cacaaactgaatgccatttgtgaaaggaagcagcagatcaaggatctatcccagagtagg
agagaaaagctgcagaccgcccttcttctggcacttttctaccagaacttagaagaggca
gaagactggatcagtgagcgcatgcagaagctggaggatccttccatacaagaccccagc
aatctgcaggacaaaatgaagctgctgcagaaacatcaggtctttgaggcagagattcta
gcaaatgaagaaatcatcacagctgttaataagaaaggagaagccctggtatcaaaaggc
cacccaaaatcaggagagatccgtcgccgagtccgcatgcttcaggagcgttgggagaaa
ttgaagagagctgttgctgcccgtggaaaaatgctggaggacagccgggacttcctggaa
tttctccagaaggtggaccaggtggaagcctggatcagggagaaggaagtcatgattaat
gtaggtgatgtgggaaatgactatgaacactgcctgcagctcatgaaaaagctgaatgag
ttccgtggagcaacatcaggggagacgacagtggatgatgctcacatcagggctatcaat
gccctggccatgaaactggagagacagaacaaggaagaaacaaagacaatatatgagcgg
cggaagcagctcaatgagaagtggaacagtttccatggtaacctgaatgcatacaggaag
aagttagagggagccctagaggttcatgccttaatcagagaaattgatgacatcacagag
agaattaccgagaagagtgtactgatacaagcactggattatgggaaagatgtggaaagt
gtggaaaacctgattcgaaggcatgaagagatggagagagaaatccgtgtaattaagtcc
aaaatggagccattggaattggaatctttccgcctttccacaaggaatccatccataaat
gacaaactgactatgaagcaacaggagatgaaaaacaactggctacgactccagggacag
gccaaacaaaggaaggagaagctggcagcctcgtatcagttgcagaagtttaacttggag
atgaaggagatgcttgattggacccaaaacatcagaggcttaatggaagcaggggggctt
cctaaaagcgcaaatgaagcggaaagcatgatggaggagcaccaggagagaaaggaggag
attgaagcacgagtggaaagattcaactctctcagtaactatggtcaagaacttgccaat
tctggtcactacgcaacccctgagattcaccagtccctgtccagactacagcaagcctgg
tctgaattgatccaagcatggcaggagcaacatataaaattgtttcaggcacaagattta
cagaaattctatggctatgtggaacagactgagagctggctcagcagcaaagaggctttc
ctagctaatgaggacttaggggactcggtgtccagtgtggagagcctacagcggaaacac
acgcagtttgaaaaagccctggaagctcagatggagaaaattgatgagatggcatcattt
gctctgcagctaacgcagaacaagcattatgactcagacaacatcaccaacagatgccag
gccgttctgaggagaaaagagaaactgctggagaatgctgctgctcgcagacatctgcta
gaggaatcaaggcttctgcagaagttgctgaggaattcctttgaggtggctgcctggatc
aatgagaagaatagcattgcccaggatgatagctggaaggatccaagcaatctgcagacc
aaactgcagaagcaccagactttccaagcagagatcatggccaatagaaaccgtctggac
tccatcaaatctgaaggggagaagatgctccgtgagaggcactatgcccctgaagccatt
cagtccagactacaagaaatggaagagctatgggaggaactgctagcaagttgccaggat
aaacgggccaagctgcaggatgcttacaagggccttcattttcagcgaagtgtagaggat
atggagaaatggttggaagatgtggaaaatgagttgaaagcaccatatagtaacaatgat
ctggtggttctgaacagtcatctgaagaaacaagaggaactggaggaagatattgctggc
catagggaccggctgcaagagcttgtggtcactgctcagcaattccagaaggagaagcat
ttccttgctgatgaactagaagagagagtagatcaactggtgcagagatacaaaagtcta
cgtgatcctctgcaggagagacgtgggagtctggaggcaagcagacttcagtatcagttc
ttccgagatgttgatgaggagttggcctgggtacatgagaagctccccatggcttcttcc
agggattatggccaatccctggcaactgttcagagtctacaagaaaagcaccaggtaatg
tcat
DBGET
integrated database retrieval system
