Calonectris borealis (Cory's shearwater): 142076803
Help
Entry
142076803 CDS
T11211
Symbol
PCDH9
Name
(RefSeq) protocadherin-9
KO
K16498
protocadherin delta 1
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
142076803 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cbor01009
]
142076803 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cbor04515
]
142076803 (PCDH9)
Protein phosphatases and associated proteins [BR:
cbor01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
142076803 (PCDH9)
Cell adhesion molecules [BR:
cbor04515
]
Cadherins
Protocadherins
142076803 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
RET_CLD1
Big_9
MAP17
V_ATPase_I
EphA2_TM
RCR
DUF6249
7tm_3
DUF6377
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
142076803
NCBI-ProteinID:
XP_074995240
LinkDB
All DBs
Position
1:178580503..179278611
Genome browser
AA seq
1161 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSTTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKESQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RFFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPINTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKAVDGGQPPRSSTAK
VTINVMDVNDNSPVVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPTPNDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGTAPPTTFKPNSPDLAKHYKSASPQSAFHLKPDTPVSMKK
HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQPQDEFYDQ
ASPDKRTEADGNSDPNSDGPLGPRGLAEATEMCTQECLVLGHSDNCWMPPSLGPYQQPKS
PLSTFAPQKEWVKKDKLVNGHTLTRTWKEDSNRNQFSDRKQYGSSEGHFNTGNHMTDIPL
ANLKSYKQASGAVESPKEHQL
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgctggctgctttgattgcctgtttaaggctggattct
gctatagctcaagaacttatttacactattagagaagagctgcctgaaaacgtacccata
gggaacataccaaaggacctgaacatttctcacatcaatgctgccacggggaccagtgcc
agccttgtctacagactggtgtctaaagcaggggatgcccctctggtcaaagtgtccagt
accaccggggagatctttacgacatctaacagaatagacagagaaaaactctgtgctgga
gcttcctatgcagaagaaaacgagtgtttctttgaacttgaagtggtgattctgcccaat
gacttttttaggctgatcaaaataaaaatcattgtaaaggatactaatgacaatgcacct
atgtttccatcccctgtcatcaatatctccatcccagaaaacactctgatcaacagtcgc
tttccaatcccatcagcaacagatcctgacacaggtttcaacggtgtgcagcactacgag
ttgttaaacgggcagagtgtctttggactggatattgtagaaactccagaaggagagaaa
tggcctcagctgatcgtgcagcagaacttggacagagagcaaaaggacacctacgtgatg
aaaatcaaagtggaggatggaggtaccccccagaaatccagcacagccatcctgcaagtc
acagtaagtgatgtcaatgataacaggccagtgtttaaagagagtcaagtagaggttcat
ataccagagaatgcccctgtaggcacttcggtaattcagcttcatgctacagatgcagat
ataggaagcaatgcagaaatcagatatatttttggtgcccaagtcgcccctgcaaccaaa
agattttttgctttaaacaacaccacagggctgattacggttcagaggtccttagatcga
gaagagactgctattcacaaggtgacagtgctggctagcgatggtagctccacaccggct
cgggcaacggttaccatcaatgtcactgatgtaaacgataaccctcctaacatagacctc
aggtacataataagtcccatcaacggcacagtgtacttatcggagaaagatcccatcaat
acaaagattgccctaattacggtttcagataaggacactgatgtgaacggcaaagtgatc
tgtttcattgagagagaggtccccttccacctgaaggcggtttacgacaaccagtatttg
ttagagacctcttccttgttggactatgagggcaccaaagaattcagctttaaaatcgtt
gcttctgattctggcaagcccagtttgaaccagactgccctggtaagagttaaactggag
gatgaaaatgacaaccctccgattttcagccagcctgtaattgagctgtcagtttctgaa
aacaaccggcgtggtctatacttaacgactattagtgccacagatgaagacagtgggaaa
aatgcagacattgtttatcagcttggccctaatgcctcctttttcgatctggatcgaaag
acgggagttttgacagcctccagagtttttgacagagaagagcaggaacgtttcattttc
actgttacagcccgagacaatggcacccctcctttgcagagtcaagcagctgtcattgtg
actgtgttggatgaaaacgacaacagtcccaaatttactcataatcacttccagtttttc
gtctcggagaacttaccaaagtatagcacggtgggggtgatcacggtgaccgatgcagat
gccggggagaataaagcggtgaccctttccatcctgaatgacaatgagaactttgtgctg
gatccatactctggagttattaagtccaatgtttcttttgatcgagaacagcagagctcc
tacacctttgatgttaaggcagtggatggagggcaacctcctcgttcttctacagcaaaa
gtaaccataaacgtcatggatgttaacgataacagccccgttgtcatctacccaccttcc
aatacttcttttaagctagtgccactctcagcaatcccaggatcggtggtagccgaagtc
tttgctgtggatatagacactggaatgaatgccgagcttaagtacacaattgtaagcgga
aataacaagggtttgtttcggattgatcccgtgacaggtaatatcactctggaagaaaaa
ccaactcctaatgatgtggggctgcatcgcttagttgtcaacataagtgatttgggttat
cccaaatccctgcatacccttgtgcttgtatttttgtatgtgaatgatactgctggaaat
gcctcttacatttatgacttgatacgcaggactatggaaacacctttggaccggaacata
ggggacagtagccaaccctaccaaaacgaggactatctcacgatcatgatcgctattgtg
gcaggtgccatggttgtcatagtggtgatatttgtcacggttctcgttcgctgtcgacac
gcatccagattcaaagctgcccagaggagcaagcaaggtgctgagtggatgtctcccaat
caggagaacaagcaaaacaagaaaaagaaaaggaagaaaaggaaatctccgaagagctct
cttttgaactttgtgaccattgaggagtccaaacctgacgatgcagttcatgaacctatc
aacgggacaataagccttccagcggagctggaggagcaaagtataggaagatttgactgg
ggcacagcaccaccaacaacctttaagcctaacagtcctgatcttgccaagcattacaaa
tctgcctctccacagtctgcttttcatctcaaacctgacactccagtttcaatgaaaaag
caccacgtgattcaggaactcccgttggacaacacctttgttggtggttgtgacaccctt
tccaaacgctcttccactagttcagatcacttcagtgcctcagagtgcagttcccaagga
ggcttcaagacaaagggccccttacacaccagacagccgcaggacgaattctacgaccag
gcttcaccggacaagaggactgaggctgatggcaactccgaccccaactcggatgggcct
cttgggccacgaggattagctgaagctacagagatgtgtactcaagaatgcctggttttg
ggtcactcagacaactgttggatgcctcccagcttgggcccataccaacagccaaagtct
cctctctccaccttcgcacctcagaaagaatgggttaagaaggacaaactagttaatgga
cacacattgaccaggacctggaaagaagatagcaacagaaaccagttcagtgaccgaaag
cagtatggttccagtgagggccatttcaacactggcaaccacatgactgacattcctctg
gccaacttgaagtcttataaacaggcctcaggagctgttgagagtccaaaggagcaccag
ctataa
DBGET
integrated database retrieval system
