Calonectris borealis (Cory's shearwater): 142076902
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Entry
142076902 CDS
T11211
Symbol
PCDH17
Name
(RefSeq) protocadherin-17
KO
K16499
protocadherin delta 2
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cbor04515
]
142076902 (PCDH17)
Cell adhesion molecules [BR:
cbor04515
]
Cadherins
Protocadherins
142076902 (PCDH17)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
142076902
NCBI-ProteinID:
XP_074995248
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All DBs
Position
1:complement(183492910..183587477)
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AA seq
1176 aa
AA seq
DB search
MYLSICCFFLCWAPALSLKNLNYSVPEEQGAGTVIGNIGRDARLAAGAAGGGMLPAERGA
PGGGRGPKSTFRVLENSAPHLLDVDGESGLLYTKQRIDREALCRRSAKCQLSLEVFANDQ
EICMIKVEIQDLNDNAPAFPSDQVDMDISENAAPGTRFPLTSAHDPDAGDNGLRTYLLTR
DDYGLFSLDVKSRGDGTKFPELVIQKPLDREEQSHHTLVLTALDGGDPPRSGTVQINVRL
IDSNDNSPVFEAASYVVELPENAPLGTAVIDLNATDADEGTNGEVLYSFSGYAPERVRDL
FSIDPQSGLIRVKGNLDYEESGLIEIDVQARDLGPNPIPAHCKVTVRLIDRNDNAPTIGF
VSVRQGALSEAAPPGTVIALVRVTDRDSGKNGQLQCRVLGGGGGPGAVPFTLEENYDNFY
TVVTDRPLDREAQDEYNVTIVARDEGNPPLNSTKSFSVRILDENDNPPRFSKNLYVLQVP
ENNIPGEYLGSVLAQDPDLGQNGTVSYSILPGHVGDVSIYTYVSVNPTNGAIYALRSFNY
EQTKHFEFRVLAKDSGSPHRESNATVRVTVLDVNDNAPLIVLPALINDTAELQVPRNAGV
GYPVGTVRALDSDFGESGRLTYEIVEGNEEHLFEMDPTSGEIRTLHPYWEELSPVAELVV
KVSDHGKPSLSAVAKLIVRALAGPLPEAGEPQVNGEQHRRPHWDLSLPLIVTLSTVSIIL
LAAMITIAVKCKRENKEIRTYNCRIAEYSHPQLGGGGGSGGGGGGSGSGGGKGKKKKISK
NDIMLVPSEGEDSRGPLNVMNVVSSPSLATSPMYFDYQTRLPLSSPRSEVMYLKPASNNL
TVPQGHVGCHTSFTGQGTNASEAPPSRMSIIQTDNFPAEPNYMGSRQQFVQSSSTFKDPE
RASLRDSGHGDSDQADSDQDTNKGSCCDMSVREALKMKTTSTKSQPLEQEQEECVNCTDE
CRVLGHSDRCWMPQFPAASQAENADYRTNLFVPTVEANVETETYETVNPTGKKTFCTFGK
DKREHTILIANVKPYLKAKRALSPLLQEVPSASSSPTKTCIEPCTSTKGPLDGCEVKSGA
LAEPSSQYLSTDSQYLSPSKQSKDAPFIASDQMARAFADVHSRVSRDSSEMDSVLEQLDR
SARDLGRESVDAEEVVREIDKLLQDCRGSDPVAIRK
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgtacctttccatttgttgcttcttcctctgctgggctcccgccctgtcgctgaagaac
ctgaattactcggtgccggaggagcagggagcgggcacggtcatcgggaacatcggccgc
gatgcgcggctggcggcgggcgcggcgggaggcgggatgctgcctgcggagcgcggcgct
cccggcggcggccgcggccccaagtccaccttccgggtgctggagaactcggccccgcac
ctcctggacgtggacggggagagcgggctgctctacaccaagcagcgcatcgaccgcgag
gcgctgtgccggcgcagtgccaagtgccagctctccctcgaggtgttcgccaacgaccag
gagatctgcatgatcaaggtggagatccaggacctgaacgacaacgcaccggcgttcccc
tctgatcaagtggacatggacatctcggaaaatgctgcgccgggcacccgcttccccctc
accagtgcccacgacccggatgccggggacaacgggctgcgcacctacctgctcacccgt
gacgactacggcctcttctccctcgatgtgaagtcccgcggtgatggcacaaagtttcca
gaactggtcatccagaagccattagaccgtgaggagcagagtcaccacaccctggtgctg
acggcactggacggcggcgatccaccacgctcgggcacggtgcagatcaacgtgcgcctc
attgactccaatgacaacagccctgtctttgaggcggcctcttacgtggtagagctgcca
gagaatgcaccactgggcactgccgtcattgaccttaatgccaccgatgccgacgagggt
accaacggagaggtgctctactccttcagtggctacgcacctgagcgtgtccgcgacctg
ttcagcattgacccgcagagtggccttatccgtgtcaagggcaacctggactatgaggag
agcggcctcattgagattgatgtccaggctcgggacctggggcccaatcccatccctgct
cattgcaaggtcaccgtccgcctcatcgaccgcaacgacaatgcgcccaccattggcttt
gtctccgttcgccagggagcactgagcgaggctgccccaccgggcactgtcattgccctg
gtgcgggtcaccgaccgtgactcaggcaagaacgggcagctccagtgccgggtgctgggc
ggtggcggcgggcccggagccgtccctttcaccctggaggagaactatgacaacttctac
actgtggtcaccgaccggcccctggaccgcgaagcacaggatgagtacaatgtaaccatc
gtggcacgtgatgagggcaatcccccactcaactccaccaagtcattttccgtccggatc
ctcgacgagaatgacaacccaccccgcttcagcaagaacctctatgtgttacaggtgcct
gaaaacaacatccctggagagtacctgggctccgtcttggcccaggaccccgacctgggg
caaaatgggacagtctcttactccattctgcccgggcatgtgggcgacgtctccatctac
acctatgtctccgtcaaccccactaatggtgctatctatgccctgaggagcttcaactat
gagcagacaaaacacttcgagtttcgtgtgctggccaaagactcgggttcaccccaccgc
gaaagcaatgccacggtgcgcgtcactgtgctcgatgtcaacgacaatgcgcccctcatc
gtcctgcccgccctcatcaatgacaccgccgagctgcaggtgccacgcaatgctggggtg
ggctaccctgtgggcaccgtccgcgccctggacagtgactttggggagagcgggcgcctc
acgtatgagattgtggaaggcaatgaggagcacctctttgagatggaccccactagcggt
gagatacgcaccttgcacccctactgggaggagctcagccctgtggctgaactggtggta
aaagtcagtgaccatggcaagcccagcctctccgcagtggccaagctcattgtcagggcc
ttggcggggcccctgcccgaggctggcgagccgcaggtgaatggcgagcagcatcggcga
ccacactgggacttgtcgctgcccctgatcgtgacgctgagcactgtctccatcatcttg
ctggctgccatgatcactattgccgtgaagtgcaagcgagagaacaaggagatccgcacc
tataactgtcgcattgccgagtatagccaccctcagctgggaggagggggaggcagtggc
gggggaggaggaggcagtggcagtggagggggcaagggcaagaagaagaagatcagcaag
aatgacattatgctggtgcccagtgagggcgaggacagccggggccccctcaatgtcatg
aacgtggtgagcagcccatccctggccacctcacccatgtactttgactaccagacccgc
ctgcccctcagctctcccaggtctgaggtgatgtacctgaagcccgcctccaacaacctg
actgtaccccagggacatgtgggctgccacaccagcttcacagggcaagggactaacgcc
agcgaggctcccccgagccggatgtccataattcagacagacaattttcccgcagagccc
aattacatgggcagcaggcagcagtttgttcaaagtagctccacgttcaaggatccagaa
agagccagcttgagggacagcgggcatggggacagtgatcaggctgacagtgaccaagac
actaacaaaggctcctgctgtgacatgtctgttagggaggcactcaagatgaaaactact
tcaactaaaagccagccacttgaacaagagcaagaagaatgtgttaactgcacagatgaa
tgcagagtgcttggtcattctgacaggtgttggatgccacagttccctgcagccagtcag
gctgagaatgcagattatcgcacaaatctctttgtacccacagttgaagctaatgttgag
actgagacatacgaaactgtgaatcccaccgggaaaaagactttttgtacatttgggaaa
gacaagagagagcacactattctcattgccaatgttaaaccttacttaaaagccaaacgt
gccctgagtcctctgcttcaggaggttccctcagcatcgagcagcccaaccaagacatgc
attgagccttgcacctcaacaaaaggaccactggatggttgtgaagtgaaatcaggagcc
ttggctgaaccaagcagccagtacttgtcaactgacagtcagtatctatcgcctagtaaa
cagtcaaaagacgctcccttcattgcatcagatcagatggctagggcctttgcagatgtg
cattcccgagtgagccgagactcgagtgagatggactctgttctggagcagttagaccgt
tcagcccgggatctaggcagggagtcggtggatgccgaggaagttgtgagagaaatagac
aagctcttgcaggactgtcgaggaagcgaccctgtagccatcagaaagtga
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