Calonectris borealis (Cory's shearwater): 142077521
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Entry
142077521 CDS
T11211
Symbol
HIF3A
Name
(RefSeq) LOW QUALITY PROTEIN: hypoxia-inducible factor 3-alpha
KO
K09096
hypoxia-inducible factor 3 alpha
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbor03000
]
142077521 (HIF3A)
Transcription factors [BR:
cbor03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
142077521 (HIF3A)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
PAS
PAS_4
PAS_9
HLH
PAS_2
Motif
Other DBs
NCBI-GeneID:
142077521
NCBI-ProteinID:
XP_074995575
LinkDB
All DBs
Position
Unknown
AA seq
430 aa
AA seq
DB search
MGSTPELRKERSRDAARCRRSRETEVFYQLAHTLPFARGVSAHLDKASIMRLTISYLRVH
RLLAAGAWAAAAEEVDGCYLKALSGFVMVLSEAGDMIFLSENVNRLLGLSQLELIGHSVF
DFVHPCDHEELQDVLSPRQAVPRRRGERSGRSFSLRMKSTLTGRGRCLNLKAASWKVLHC
AGHMRSYXGGGGGDPPLRCLVLICEAIPHPGAIEAPLGSGTVLSRHSMDMKFTYCDDRWG
LRGGYTPEELLGCSLYEYVHALDSDTLSRSVHTLLSKGQAVTSQYRFLAKRGGFLWAQTQ
ATVIANSRSAQPEGIVCLHFVLSRVEQRGVVLSLEQTQGRGGGAPPAPPRPPPRPPPTPS
STSAWGVGGPRVLAFVRPAHVPEAALQRDPRRFCSPELARLLAPIFDPPPGAPPPPPPAA
LPAIPLSAPP
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgacgccggagctacggaaggagcgctcgcgggacgcggcgcggtgccggcgc
agccgggagacggaggtcttctaccagctggcgcacaccctgcccttcgcccgcggcgtc
agcgcccacctcgacaaggcctccatcatgcgcctcaccatcagctacctgcgggtccac
cgcctcctcgccgccggcgcctgggcggcggcggcggaggaggtggatgggtgctacctg
aaggcgctgagcggcttcgtgatggtgctgagcgaggcgggggacatgatcttcctctcc
gagaacgtcaaccgcctgctggggctcagccagctggagctgatcggccacagcgtcttc
gacttcgtgcacccctgcgaccacgaggagctgcaggacgtgctcagcccccggcaggcg
gtgccgcggcggcggggggagcgctcggggcgcagcttctccctgcggatgaagagcacc
ctgacggggcgcgggcgctgcctcaacctcaaggcggcctcctggaaggtgctgcactgc
gcggggcacatgcggtcgtacngcgggggcggggggggggaccccccgctgcgctgcctg
gtgctgatctgcgaggccatcccccaccccggggccatcgaggcccccctgggctcgggc
accgtcctcagccgccactccatggacatgaagttcacctactgcgacgacaggtggggg
ctgcgtggggggtacacccccgaggagctgctcggctgctccctctacgagtacgtccac
gccctcgactccgacaccctcagcaggagcgtccacaccctgctgagcaaggggcaggcg
gtgacgagccagtaccggttcctggccaagcgcggggggttcctgtgggcgcagacccag
gccaccgtcatcgccaacagccgcagcgcccagcccgagggcatcgtctgcctccacttc
gtcctcagccgcgtggagcagcggggggtggtgctgtccctggagcagacccaaggccgg
gggggaggggcgccgcctgcccccccccgccccccgccccgcccccccccgacgccgtcc
tcaacctcagcctggggggtggggggcccgcgggtgctggccttcgtgcgcccagcccac
gtccccgaggcagcgctgcagcgggacccccggcgcttctgctcccccgaactcgcccgc
ctcctcgcccccatttttgaccccccccccggcgcccccccgccgccgccccccgcagcc
ctccccgcgatcccgctctcggccccgccctga
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