Calonectris borealis (Cory's shearwater): 142077707
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Entry
142077707 CDS
T11211
Symbol
VPS36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36 isoform X1
KO
K12190
ESCRT-II complex subunit VPS36
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
142077707 (VPS36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbor04131
]
142077707 (VPS36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cbor04147
]
142077707 (VPS36)
Membrane trafficking [BR:
cbor04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
142077707 (VPS36)
Exosome [BR:
cbor04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
142077707 (VPS36)
Exosomal proteins of colorectal cancer cells
142077707 (VPS36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
GRAM
NAI2_C
BBL5_2nd
DUF1351
BBL5
Xre-like-HTH
V-ATPase_G_2
Motif
Other DBs
NCBI-GeneID:
142077707
NCBI-ProteinID:
XP_074995801
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Position
1:191143933..191164476
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AA seq
386 aa
AA seq
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MDRFSWTSGLLELGETLVVQQRGVRLCDGEEKVKFDSGVLLLSTHRLIWRDQKNHECCIA
IPLSQIVFIEEQAAGIGKSAKIVVHLHPTSSNKEPGPFQSSKYSYIKLSFKEHGQIEFYR
RLSEEITQRRWENMPTGQTIQVNKDPQAGRIRAVGIVGIERKLEEKRKETDKNISEAFED
LSKLMEKAKEMVELSKAIANKIKEKQGDITEDETIRFKSYLLSMGIANPVTRETYGSGTH
YHMQLAKQLAGMLQTPLEERGGIMSLTEVYCLVNRARGLELLSPEDLVNACKMLESLKLP
LRLRIFDSGVMVIELQSHNEEEMVASALETVSEKGSLTADEFAKLVGMSVLLAKERLLLA
EKMGHLCRDDSVEGLRFYPNLFLTQG
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggacaggttctcgtggaccagcgggctgctggagctgggagagacgctggtagtgcag
cagcgcggtgtgcgcctctgcgacggggaggagaaggtgaaatttgatagtggagtatta
ctgcttagcacacacaggctaatctggagggatcagaagaatcatgagtgctgcattgct
atacctctgtctcagattgtctttattgaagagcaagcagctgggataggaaaaagtgcc
aaaatagtagttcatcttcatcccacttcttcaaacaaagagcctggtccattccaaagc
agcaaatattcctacatcaaactttctttcaaagaacatgggcagattgagttctataga
cgattatcagaagaaatcacacaaaggagatgggagaacatgcctactggtcagaccatt
caagttaacaaggatccacaggcaggaagaataagagctgtaggaattgtagggatcgaa
aggaaattagaggaaaaaagaaaagagactgacaaaaacatttccgaggcttttgaggat
cttagcaaactaatggagaaggctaaggaaatggtggagttatccaaggcaatagctaat
aagattaaagaaaaacaaggtgacatcactgaggatgagactattaggttcaagtcctat
ctactgagtatgggtatagctaatccagttactagggaaacatatggatctggtacacat
taccacatgcaactggcgaagcaactagctggaatgctgcagacaccgttagaggagcga
ggagggatcatgtcacttacagaagtgtactgtctggtaaatcgcgcacgaggattagag
ttgctgtcaccagaggatttagtaaatgcttgtaagatgctggagtcactgaaattacca
ctaaggcttcggatatttgacagtggtgtgatggtgattgaactccagtctcataacgaa
gaggaaatggtagcttctgctttagagaccgtatctgaaaagggttctctcacagctgat
gagtttgctaagctggtggggatgtctgttctcttagccaaagaaaggctgcttcttgct
gaaaagatgggccatctttgcagagatgattcagtggaaggcttgagattctacccaaat
ttatttctgacacaaggctaa
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