Calonectris borealis (Cory's shearwater): 142077722
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Entry
142077722 CDS
T11211
Symbol
TRPC4
Name
(RefSeq) short transient receptor potential channel 4 isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cbor04040
]
142077722 (TRPC4)
Ion channels [BR:
cbor04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
142077722 (TRPC4)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
YVC1_C
Motif
Other DBs
NCBI-GeneID:
142077722
NCBI-ProteinID:
XP_074995847
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Position
1:192757775..192860317
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AA seq
975 aa
AA seq
DB search
MAQFYYKRSVNAPYRDRIPLRIVRAESELSHSEKAYLNAVEKGDYASVKKALEEAEIYFK
ININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPVLLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQKGVSVPRPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDNSLIEEQSGNDLARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAVKMLTCVVIGLLFPVFSVCYLIAPKSPLGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIDRSDLSMQGPPPTVVEWMILPWVLGFIWGEIKQ
MWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFSKYSGLVPRESWDMWHPTLVAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YETNEPGNCKGIRCEKQNNAFSTLFETLQSLFWSIFGLINLYVTNVKARHEFTEFVGATM
FGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVI
PSPKSLWYLIKWLWRHLCKKKIRRKPESFGTIGRRAADNLRRHHQYQEVMRNLVKRYVAA
MIRDAKTEEGLTEENFKELKQDISSFRFEVLGLLKGSKLSNLQTAKMSKDAASLSENEEN
SESEGNKKGKKKTFSLFDITTMIHPRSATVASEAHNVSNGSAMMVSESTKEKQKRVNFVT
DIKNFGLFHRRSKTNSVEQSTNKIYTVSEEVSRQQAEEQCEKTAELEEGELAMNCELNIQ
SSDEKCVLAESQNNGDSPDSQEEGSICASETEKMELRNSEPAIPQDQLDKELDISIDCDG
KQETIDQGDYVVTRL
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggcccagttctactacaaaagaagtgtcaatgctccctacagagatcgtatccctctt
cgtattgtacgggcagaatctgaactgtctcattcagagaaggcctatctgaacgccgtg
gagaaaggagattatgccagtgtaaagaaagctttggaggaagcagaaatttatttcaag
atcaatattaattgcattgatcccctgggaagaactgcactccttattgcaattgaaaat
gagaaccttgagctcattgagctgctcttaagttttaacgtatatgtgggagacgctctg
ttgcatgccatacgaaaggaggtagttggtgccgtggagctgctgttaaaccacaagaag
cccagtggggagaaacaggtgccaccagtgcttctggacaagcagttttcggaatttaca
ccagatatcacacccattattctggctgcccacaccaacaattatgaaatcataaagctc
cttgtgcagaaaggggtctccgtgcccaggccacatgaggtccgctgtaactgcgtcgaa
tgtgtctcaagttcagatgtggacagcctccgccactctcgatccagactcaatatctac
aaggctctggcaagcccatctttgattgctttgtccagtgaggatcctttccttactgct
tttcaactgagctgggagctgcaggaactgagtaaagttgaaaatgaatttaagtcggag
tatgaggaactgtcacggcaatgcaagcaatttgcaaaagatctcctggatcagacacgg
agttccagggaattggaaattattcttaattacagagatgataatagcttgatagaagaa
caaagcggtaatgatcttgcaagattgaaactggcaattaagtaccgtcaaaaagagttt
gttgctcagcccaactgccagcagctgctcgcatcccgctggtacgacgagttccccgga
tggaggaggcgacactgggctgtgaagatgttgacatgtgttgtgataggactccttttc
ccagtcttctccgtgtgctacctgatagctcccaaaagcccactagggctgttcatcaga
aagccatttatcaaatttatctgccatactgcatcctacttgacttttctgttcctgctg
ttgcttgcctctcagcacattgacaggtcagacttgagcatgcagggaccgccaccaacc
gtcgtcgagtggatgatattaccgtgggtcctgggttttatctggggtgaaattaaacag
atgtgggatggtggactacaggactacattcatgactggtggaacctcatggattttgta
atgaactccttgtacttagcaacaatctctttgaaaattgttgcattttcaaagtatagt
gggttagttccacgggagagctgggacatgtggcatccaaccctggtggctgaggccctg
tttgcaatcgcaaacatctttagctccctacgcttgatctcattattcactgcaaattct
cacctgggacctctgcagatatctctaggaagaatgttgctggacattttgaagtttctc
ttcatatactgccttgtgctgctagcttttgcaaatggattgaaccagctgtacttctac
tatgagacaaatgaacccggcaattgcaaaggaatacgatgtgaaaagcagaataatgca
ttttcaacgttatttgaaacactgcagtcattattctggtctatatttggactcatcaat
ctctatgtgaccaatgtgaaagcaaggcatgaatttactgaatttgttggagccaccatg
tttggtacctataatgtaatctctctggttgttctactcaacatgttaatagccatgatg
aataattcttaccaacttattgctgatcacgcagacattgaatggaagtttgctcgaaca
aaactctggatgagttactttgaagaaggaggaactctgcccactcctttcaatgtcata
ccaagcccaaagtctctctggtatctaatcaaatggttatggagacatctctgcaagaaa
aaaattagaagaaaacctgaaagttttggaacaatagggaggcgtgcagctgacaatctg
agaagacatcatcaataccaggaagttatgagaaatctggttaagaggtatgttgcagca
atgataagagatgccaaaactgaggaaggactgacagaagaaaattttaaggagttaaaa
caagatatttccagctttcgttttgaagtcctgggtttgttgaaaggaagcaagctgtct
aatttgcagactgcaaagatgagcaaagatgctgcctctctgtcagaaaatgaagaaaat
agtgagagtgaaggaaacaagaaaggaaagaaaaagaccttcagcctttttgacataaca
acgatgattcacccaagatcagccactgttgcctctgaagcacataatgtaagcaacggc
tcagcaatgatggtgtcggagtccactaaggagaaacaaaagcgtgtgaattttgtaaca
gacataaaaaattttgggttatttcacagacgatcaaaaacaaactctgtggagcagagt
acaaataaaatatacaccgtttctgaagaagtttcccgtcaacaggctgaagaacagtgt
gagaaaactgctgaactggaagagggagaactggccatgaactgtgaattaaacatccaa
agttctgatgaaaaatgcgtgttagctgagtcacaaaataacggcgactctccagattca
caggaagagggaagtatttgtgcttcagaaacagagaaaatggagttacggaactcagaa
ccagccataccgcaggatcagctggacaaggagttggacattagcattgactgtgatggg
aaacaggaaacaattgatcagggtgattatgtggtaacaaggttgtga
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