KEGG   Calonectris borealis (Cory's shearwater): 142077808
Entry
142077808         CDS       T11211                                 
Symbol
PARP4
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4 isoform X1
  KO
K10798  protein mono-ADP-ribosyltransferase 3/4 [EC:2.4.2.-]
Organism
cbor  Calonectris borealis (Cory's shearwater)
Pathway
cbor03410  Base excision repair
cbor04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:cbor00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    142077808 (PARP4)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    142077808 (PARP4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cbor03400]
    142077808 (PARP4)
DNA repair and recombination proteins [BR:cbor03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     142077808 (PARP4)
SSDB
Motif
Pfam: PARP4_MVP-ID VIT WGR-like_PARP4 PARP VWA_3 VIT_2 VWA VWA_2 BRCT_2 BRCT VWA_CoxE KdpA
Other DBs
NCBI-GeneID: 142077808
NCBI-ProteinID: XP_074996073
LinkDB
Position
1:complement(201221334..201276946)
AA seq 1639 aa
MAIFANCVFFIKVKYLAIQEKSRLKACIKENGGVVNFVLNHKSTHVLVDTADVLSCRDLK
NIQKYQLPVLCADFIWKSVEKGKLLQIDAYKVNKSQDDTSDQRPDRQDVEDLSSAKNKHA
TRKNENNDSNLTVIEDSERRIDSKVGTLRFYSENDQDIPFFPEDFEVAKYSVLEKVNSKE
SKDLVVIELQCSQKHYEFPFRLYAHFSASNGMNKNNKQFVTNTAEDIREKYETFIADLKS
QDFLLRETFPPEAESLASTKLQKLLLEEAIHSSVICQEVSDFVELIWAEAIGHLDSLLLE
SVNNISLNDVSKAEGILLQVKNALDEGAGEVALQEMMMEFYQVIHHKSEIDYKVSKKLLS
RKQDLCQLIRDMLNIHETNMSCPNPSSLAKYWALRCKIEAVDSTSYEFLNIEQQVLKNNY
NDCPVQILQVYRVGRITETAEFLSSLGNIRSLFHASSVRNFMGILSRGLLMPKVVVEDHG
LERTDIGNLGSGIYFSDSVSATIKYSSPSEMDGTRLLVVCDVALGSCLDLYERDYSLNNA
PSGYDSVHGVRKTADISSDFEDDEFVVYKTCQVKIRYVVKFCLAEDQIKPFQHGIWVELE
QDNNEPESQCHLQRESYALPNANLSNPVKTGLQDRLGNPVPLEGVYIKARIIDFVAQVVM
FQTYTNQNSKPIEAKYVFPLDDKAAVCGFEAFINGKHVIGEVKEKKQAHREYRKAISQGD
GAYLMDQDAPDIFVISVGNLSPNSTVVIKITYITELSFQHGCITFHMPASVSPWQQDKAL
NENTQDTIKKVCVKQVKPQKNQFSVDMSIEMPSSIERIHSWTHKLKIKKTDCKAVIKTVE
NSSLDVSGFVLDIWISQVYLPRMWVEKHPNKMSEACMLVFQPEFETAFEEEQLSSEIIIL
LDCSNSMAGSALHQAKQIALRVLELFCFRQRVNVVKFGTNFTEFSSFSMNIINDLASLKE
FVTSATATLGNTDLWKTLRYLHLLFPSQGHRNILLISDGHIQNESVTFQIVKDNVRHTRL
FTCGVGSTANRHMLRSLSQYGAGAFEYFDPKSKYNWEAKIQSQVSRIFSPGCSSVSIKWQ
QFNVGAPEPMQAPAQIQSLFNNERLLVYGFIPHCTQATLRAVINDQELQTVVSTTELQKT
TGTVLHKLAARAFINDYEDGILHENETEHEMKKQILKNMIIHLSLENSIISQFTSFVAVE
KRDAYETCSADAPNILEIIAQEDVDFLPYMDWDQKSMESGFLFSEEIAFALACSPAAANV
YSADFLSENSEPESFQFQSEEVAVTQKSIAPKNTAQGFVNVSELESSTCSLKSNFSFGRG
ITKERSSGTRSSSPHDLHLPHVASSSFDFKAKPGIDLTLQKSLQTPALTKLDVCVDVPEP
PPPLPLPYSFQIPVGGFKGGFYSWLAPMQGSACFGSPTSTCTNSEKTNVEKQVIPKSPGF
QANRKKALLRSGCKKKAVCQHDVTAAGEEFTEKVKAVEQSRCFITTEKERIQQRIELTSV
NWKEIFALQNQDGSWNLSPQLGKILKFDVDHLINDFLIRKGIQSLGPTGKEKLLQLIATL
LVLQFIRCTNELKGIVFKTLMKLDDSSNSSGVHWPFELIKKAIEWVRRVEKRFPSICYRL
ELGKDWDSATKKILGIKFT
NT seq 4920 nt   +upstreamnt  +downstreamnt
atggcaatctttgcaaactgtgtgttctttattaaagttaaatacttagccattcaggag
aagagcaggctgaaagcatgcataaaagaaaatggtggagtagttaattttgtgcttaat
cacaagagtacacatgttcttgtggatactgctgatgtcctcagctgtcgtgatctaaaa
aatattcagaagtatcagctccctgttttatgtgcagatttcatttggaaatcagttgaa
aaggggaagcttttacagattgatgcatataaggttaataaatcacaagatgacacttct
gaccaaagaccagacagacaggatgtggaagacctgtcatctgctaaaaataaacatgcc
acaaggaaaaatgaaaacaatgattccaaccttactgttattgaagacagtgagagaaga
attgattccaaagtggggactcttagattttacagtgaaaatgatcaagacattcctttt
ttccccgaagattttgaagttgcaaaatacagtgtccttgaaaaagttaactccaaggaa
agcaaagatttggtagttattgaattacagtgttcccaaaagcattacgagtttccgttt
cgactatatgcacacttcagtgcatcaaatggtatgaacaagaataataaacaattcgta
actaatactgctgaagatataagagaaaagtatgagacttttattgcagacttgaagagc
caggatttcctgctcagagaaacttttccaccagaagcagaatctttggcttctacaaaa
ctgcaaaagttacttctagaagaagccatccattcaagtgtcatatgtcaggaagttagt
gattttgtggaattgatctgggcagaagctattggccacctggatagtttactccttgaa
tcagtaaacaacataagtctaaatgatgtgagcaaagcggagggtattttactccaagta
aagaatgcactggatgagggagctggcgaggtggcactacaagagatgatgatggaattc
tatcaagttatacatcacaaatctgaaatagactataaagtttcgaaaaagctgctatct
agaaaacaggacctgtgtcagctaatcagagacatgcttaatatacatgaaacaaatatg
tcatgcccaaacccatcatctttggccaaatactgggctctgaggtgcaagatagaagct
gttgactcaacgagttatgaatttctcaatattgaacaacaagtgttaaaaaacaattac
aatgactgtccagtgcaaattttacaagtgtatagggttggcagaataactgaaacagca
gaatttctgagcagtcttggaaacattcgatccttattccatgcatcgtctgtgcgcaac
ttcatgggaattctttccagaggactcctaatgccaaaagtggttgttgaagatcatggc
ctggaaagaactgacattgggaatctgggcagtggcatttacttcagtgattctgttagt
gccactattaagtactcttcacccagtgaaatggatggaacccggcttctggtagtttgt
gacgtggcacttggatcctgcttagatttgtacgaacgagattattcgttaaataatgca
ccatcaggttatgacagtgtgcatggagtccgtaaaacagcagacatctcttcagacttt
gaggatgacgaatttgtagtgtataaaacctgtcaggttaaaattagatatgttgttaag
ttttgccttgctgaagatcaaataaaaccatttcagcatggaatttgggtggaactggag
caagataacaatgagccagagtcgcaatgtcatttacagcgtgagagctatgcattacca
aatgcaaatctttcaaatcctgtaaaaactggtcttcaggacagattgggaaatcctgtc
cctctggaaggtgtttatatcaaggccaggataatagactttgtagcacaggtagtaatg
tttcagacctacaccaatcaaaacagtaaaccaattgaagccaaatatgtctttcctttg
gatgataaagctgctgtttgtggatttgaagcttttatcaatggaaaacatgtcattgga
gaggttaaagaaaagaaacaagcacatagggaatatcggaaagctatcagtcagggtgat
ggagcttatctaatggaccaggatgcaccggatatttttgtaataagtgttggaaactta
tctccaaattctacagttgtgatcaaaatcacctatatcactgaactgagttttcagcat
ggttgtatcacctttcatatgcctgcttctgtgtcaccatggcaacaggacaaagcatta
aatgaaaacacacaggatacaataaaaaaggtttgtgttaaacaagtaaaaccacagaaa
aatcaattttccgtggatatgtctattgagatgccatctagtattgaacgcattcatagt
tggacacataaacttaaaataaagaaaacagactgcaaggctgtaattaagactgtggag
aacagctccttggacgttagtggctttgttctagatatctggatttctcaggtctaccta
cctcgaatgtgggtagagaagcatcccaacaaaatgagtgaggcttgcatgcttgtattc
caaccagagtttgaaacagcatttgaagaagagcagctgtccagtgaaattattatttta
ttagattgctcaaattctatggcaggttcagctctacaccaagccaagcagattgcttta
cgtgttttggaactattttgtttcagacaaagagtgaatgtagtcaaatttggcacaaat
tttacagaattttcttctttttcaatgaacatcataaatgatttggcatcactgaaggag
tttgttacatctgctaccgcaacattgggaaacactgatttatggaagaccttacgttac
ttacatctgctatttccttctcaaggacaccgtaacattcttcttatatcggatggacac
attcagaacgagagtgtgaccttccagattgtgaaagataatgtccgacatacgaggtta
tttacatgtggtgttggttccacagcaaatcgacacatgctgagatctttgtcccagtat
ggtgctggagcatttgaatactttgacccaaaatcaaagtataactgggaggcaaagata
cagagccaggtatctagaatattttctccaggatgcagttcagtttctattaaatggcaa
cagtttaatgtaggtgcaccagagccaatgcaggctcctgctcaaatacagtctttattt
aacaatgagagacttcttgtctatggattcatccctcactgtactcaggccaccttaagg
gcagtaataaatgaccaagaactacagaccgtggtgtcaactactgaactacagaagaca
acaggaacagtgctgcacaagcttgcagcaagagctttcattaatgactatgaagatggg
attcttcatgagaatgaaacagaacatgagatgaagaaacaaatcttgaaaaacatgatt
attcacctcagcttggagaactcaattataagccagtttacaagcttcgttgcggttgag
aaaagggatgcttatgaaacttgttctgctgatgctccaaacatcctggaaattatagct
caagaagatgtagattttttaccttacatggactgggaccaaaagtcaatggaatctggc
ttcttattttcagaagaaattgcctttgccctggcatgttccccagcagcagccaatgtt
tattcagctgatttcctaagtgagaacagtgaacctgaaagcttccaatttcaatctgaa
gaagttgctgttactcaaaagagcatcgcaccaaaaaacacggcacagggctttgtaaat
gtttctgaacttgaaagtagtacttgcagtctcaaatcaaatttcagttttggtagaggc
atcacaaaggagagatcttctggaacaaggtcatcttcaccacatgaccttcatctgcca
catgttgcttcctcgtcatttgattttaaagctaagccaggaattgatctgactctacaa
aaatcacttcagacacctgcacttacaaaattagatgtttgtgtggatgttcctgaacct
ccccctcctctaccccttccctattcttttcaaataccggtgggaggcttcaaaggtggt
ttttattcttggcttgctccaatgcagggttcagcatgctttggttcacctacctctaca
tgcacaaattctgaaaagactaatgttgaaaaacaagttatccccaaatctcctggtttt
caagctaatagaaaaaaagcattgctaaggtcagggtgtaagaaaaaggcagtatgtcag
catgatgttacagctgctggagaggaatttactgagaaggttaaggctgtggaacaatca
aggtgttttataacaacagagaaagaaaggattcaacagagaattgagttgacttctgta
aactggaaagaaatttttgcactccaaaatcaggatggctcttggaatcttagcccacag
ttgggaaagatcttgaaatttgatgttgatcatttaattaacgatttccttattagaaaa
ggcattcagtcacttggcccaactggaaaagaaaagctactgcagttgattgctactctt
cttgtgctacagttcatacgctgcacaaacgaattgaaagggatagttttcaaaacactg
atgaaactggatgattcatctaattcaagtggtgttcactggccttttgagttgatcaag
aaagcaatagagtgggtaagaagagttgagaagcgatttccatcaatttgctatcgactt
gaacttgggaaagactgggattctgccactaagaagatactgggtatcaagtttacctaa

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