KEGG   Calonectris borealis (Cory's shearwater): 142078011
Entry
142078011         CDS       T11211                                 
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
  KO
K14297  nuclear pore complex protein Nup98-Nup96
Organism
cbor  Calonectris borealis (Cory's shearwater)
Pathway
cbor03013  Nucleocytoplasmic transport
cbor05164  Influenza A
Brite
KEGG Orthology (KO) [BR:cbor00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    142078011 (NUP98)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    142078011 (NUP98)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cbor03019]
    142078011 (NUP98)
   03036 Chromosome and associated proteins [BR:cbor03036]
    142078011 (NUP98)
Messenger RNA biogenesis [BR:cbor03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     142078011 (NUP98)
Chromosome and associated proteins [BR:cbor03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    142078011 (NUP98)
SSDB
Other DBs
NCBI-GeneID: 142078011
NCBI-ProteinID: XP_074996588
LinkDB
Position
1:complement(220254969..220297282)
AA seq 1815 aa
MFNKSFGTPFGGSTGFGTTSTFGQNAGFGTTSGGAFGTSAFGSNSNTGGLFGSTQTKPGG
LFGSTTFNQPATSSTSTGFGFGTSTGTSNSLFGTTSTGGGLFSSQNNAFAQNKPAGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPTSFTAAPTGTTIKFNPPTGTDTMVKSGVST
NINTKHQCITAMKEYESKSLEELRLEDYQANRKGPSNPVGAGAAAGLFGSSTATSSTATG
LFGSSTTNTGFSYGQNKTAFGTSTTGFGTGTTGGLFGQQSQTTSLFNKPFGQATTTQNTG
FSFVNTSTLGQPNTNTMGLFGVTQPSQPGGLFGTAANTNAGTGFGTGTGLFGQTNTGFGV
GGSTLFGNKPAGFGTTTTSAPSFGTTTGSGLFGNKPTLTLGTNTNTSNFGFGANTAGNSL
FGNKPATGTLGTGLGTGFGTALGAGQTSLFGNTQPKLGGTLGTGAFGAPGFNTSTAALGF
GAPQPAVALTDPNASAAQQAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPA
AQKALTTPTHYKLTPRPATRVRPKALQSAGSAKSHLFDGLDDDEPSLSNGAFMPKKSIKK
LVLKNLNSSNLFSPVNRENEDLASPSEYPENGDRFFLSVPPDENHRQDGEREEEEDHHEV
TRFYTNPIAKPIPQTPENTVHKHQNSVDDTIVALNMRVALRNGLEGSSEDASFHDDSLQD
EREEEPETVHHLHPAGIVLTRAGYYTIPSMEELARFTNDRNECIVTDFTIGRKGYGSIYF
EGEVNLTNLNLDDIVHIRRKEVIVYPDDERKPPIGEGLNRRAEVTLDGVWPTDKTSRCLI
KSPERLAEMNYEGRLESVSRKQGARFKEYRPETGSWVFKVAHFSKYGLQDSDEEEEEHPS
KVDTKKLKTTPVLPPGHLPPQQMTLNGKPTPPSQTPEVEQLGRVVELDSDMADITQEPPQ
ESIVEDNMIEEQEAVPASTHIVSTLGINPHVLQIMKASLLADEDDLDLILDHYPGKQPVK
MDTSQEICSPRLPISKSQGQKRYSVGGLLQSKFANVIFQPPSAAPQDFKGPGTLSSPPSV
ALWSATSPLVSTFSVPPSVPEVQMKTVGVRRQQGLVSLEKSITYGKGKLLMDMALFMGRS
FRVGWGPNWTLVNCGDQLSGSSEMEDPQSECVEHGFLPTPVAPKSLSESSFKVHVEKLSL
EQRKMGRDKQLYLIPLEIKLKHSTVHMDEQCPLLAPNPGVSAIHDYADWVRKASEDPAVT
ETVVKHWCLTWTLCEAIWGNLKELEASLEEPSEYILALERRKAFSRWLSETAAGRIEEEV
SLSRHGNHVEAVFSCLTGKRIGEACRLAQQSGEHRLALLLSQLAGSQPVRDLLTMQLVDW
HRLQADCFIQEERLRIFALLAGKPVWQLSETISINVCSLLDWKRCMAVHLWYLLPPTASI
SKALAMYESAFQNTPECEKYACCPLPPYLEDSGCVIEDVDNAGRPLRDVCFHLLKLYSDR
HYDLDQLLDPRSVTSDPLDYRLSWHLWEVLRALNYTHLFKQSQGVLNASYAAQLESEGLW
EWAVFILLHEPDTHIREKAVRELLNRHCVLSETPESWAKETFLTQRLCVPPEWIHEAKAV
RARMEGDKHKEALFLFRAGHWNQCHKLVVRHLASDAIINENYKYLKGFLEDLAPPERSAL
IQDWEMAGLVYLDYIRVIEMLDRIQQLDCSTYELERLHTKVTSLCNRIEQIQCHSAKDRL
AQSDMAKRIANLLRVVLSLQHAPEPISDSTPDVQRVPLRLLAPHIGRLPMPEDYALEELR
SLTQSYLRELTVVTH
NT seq 5448 nt   +upstreamnt  +downstreamnt
atgtttaacaaatcctttggaactccatttggaggcagcactggctttgggacaacttca
acttttggacaaaatgctggctttggtactacaagtggaggagcatttggaacatcagcc
tttgggtcgaacagtaatactggaggcctctttgggagtacacagacaaaaccaggagga
ttatttggttcgactacatttaatcagccagccacctcctccacaagcactggctttggg
tttggaacgtcaactgggacatcaaatagcctgtttggaactaccagcactggtggaggc
ctcttctcatcccagaataatgcctttgcacagaataagccagctgggtttggaaacttt
ggaactagtaccagcagtggaggtctctttggaaccactaacactacttccaatcctttt
ggaagtacatctggctctctttttggcccaactagtttcaccgctgctccaactggcacg
actattaagtttaatccaccaaccggtacagatactatggtaaaatctggagttagcact
aacatcaataccaagcaccagtgtattactgccatgaaagaatatgaaagcaaatctctc
gaggaactccgtttagaagactaccaggcaaataggaaggggccctcaaatcctgtagga
gcaggagcggctgcaggcttgtttgggtcttccactgctacatcaagtacagctacggga
ctttttggctcttctactactaacacgggcttttcatatgggcagaataaaactgctttt
ggaaccagtacgactggctttggaacaggaacaacagggggtctttttggtcagcaatct
caaactacaagtctgtttaacaaaccatttggtcaagccacaacaacgcagaacactggc
ttttcttttgtcaataccagcactctagggcagccgaacacgaacacaatgggtctcttt
ggggtaacccagccctcacagcctggaggcctttttgggacagctgccaatacaaatgct
ggtactggatttggaaccggaactggtctttttggacaaactaacacaggatttggtgtt
ggcggttcgaccctgtttggtaacaagcccgctggatttggaaccaccacgaccagtgct
ccctcatttggtacaaccactggcagcgggctctttggtaacaaaccaaccctgacttta
ggaaccaatacaaacacttccaattttggttttggtgccaacactgctggaaatagtttg
tttggaaataagcctgcaactgggactctgggaactggacttggaacagggtttggaacg
gctcttggagcaggacagacttctttatttggaaacacccagcctaaacttggtggaaca
ctaggaacaggagcatttggagcaccaggattcaatacatcaacagctgctctgggcttt
ggagcccctcagcctgctgtagcactgacagacccgaatgcgtcagctgcccagcaagca
gtccttcagcagcatctcaatagcttgacttattcaccctttggagattctccgctcttc
agaaaccccatgtcagacccaaagaagaaagaagagaggctgaaaccaactaacccagca
gctcagaaggccttaacgacacccacccactacaaactgactccgcgtccagcgaccaga
gtgcgaccaaaagctttgcagtcagctggctctgctaaatctcatctcttcgatggtctt
gatgatgacgagccatccctatccaatggtgcattcatgccaaagaagagcatcaaaaag
ttggttttgaagaatctcaacagtagcaatctgttctcacctgtcaatcgtgaaaatgaa
gacctggcttctccatcagagtatccagagaatggagatcggttctttttgtcggtacct
cccgatgaaaaccacagacaagatggcgagcgagaggaggaggaggatcatcatgaagtg
actaggttttacactaaccccattgccaagcccatcccacagaccccagagaacactgtg
cacaaacaccagaacagcgtggatgataccattgtggctctaaacatgcgggtggccttg
cgaaatggtctggaaggcagcagcgaagatgcctcatttcatgatgattcccttcaggat
gagcgtgaagaggagcctgaaaccgtgcatcatctgcatcctgcagggattgttctaaca
agagctggctattacaccatcccgtccatggaggagctagctagatttaccaatgacaga
aacgaatgtattgtgacagacttcaccataggccgtaaaggttatggatcaatttacttt
gaaggagaagtaaatctaactaacttaaatctggatgacattgtacatatccgtagaaaa
gaagttattgtttaccctgacgatgaaagaaagccacctattggtgaaggtttaaataga
cgagctgaagttaccttagatggagtctggcctacagataaaacatctcgttgcctgata
aaaagccctgaacgactggcagagatgaattacgaaggtagactggagtctgtatctcgg
aagcagggcgctcgattcaaggaataccgcccagagactggatcctgggtgttcaaggtg
gcacacttttccaagtatggcttgcaagattcagatgaggaagaggaagagcatccttca
aaagtggacacaaagaagctaaaaactacacctgtgctgcccccagggcatctgccgccc
cagcaaatgaccctaaacggcaagccaacacctccatctcagaccccagaagtggagcag
ctgggcagggttgtggaactggacagcgatatggcagacatcacccaggagcctccccag
gagtccattgtagaagataacatgatagaagagcaggaggcagtgcctgcttcgactcac
atcgtgtcaaccctcggtattaacccccatgtcttgcagattatgaaagcttccttgctt
gctgatgaagatgacctagatttgatcctggatcattatcctgggaagcaacctgtaaaa
atggatacgtctcaagagatctgttctccaagactccctatttcaaaatcacaaggacag
aaaagatactcagttggcgggctgctgcagtcaaaatttgctaatgtaattttccagcca
ccaagtgctgctccgcaggatttcaagggaccagggactttgagcagtcccccgtctgtt
gccctttggtcggcgacttctccattagtgtctacattctctgtaccaccatcagtccct
gaggtacagatgaaaacagttggtgtccgcaggcagcaggggcttgtatctctggaaaag
tccatcacctacggaaaagggaagctactgatggatatggcactcttcatggggcgctca
tttcgtgttggttggggacccaactggacacttgtcaattgtggagatcaattgagtgga
tcaagcgaaatggaagatcctcagagtgagtgtgtggagcacggattcctgccaactcct
gttgctccaaaatcactctcagaatcctctttcaaggttcatgtggagaagctgagctta
gaacaacggaagatgggcagagacaaacagctgtatctcatccctctggagataaagctg
aaacacagcactgtccatatggatgaacagtgtcctcttctagcgcccaacccaggagtt
tctgctattcacgactatgctgactgggttaggaaggcatctgaggatcctgctgtgaca
gaaactgttgtaaagcactggtgcttgacatggactttatgtgaagcgatttgggggaac
ctgaaagagttagaggccagcttggaggagcccagtgagtacatcctagccctggagcgc
aggaaggccttctctcgctggctgtcagagaccgctgcaggacgaattgaggaggaggtc
tctctgtcccgacacggtaatcatgtagaggctgtgttcagctgccttactgggaagagg
attggtgaagcttgcaggctggcacagcagtcaggcgaacacaggcttgctctgctcctc
tcccagctggcaggtagccagcctgttcgggacctcctcaccatgcagctggtagactgg
cacaggctgcaggcagactgcttcatccaggaagagagattgcggatctttgccctgctt
gcaggaaagcctgtgtggcagctatcggagacaataagtatcaatgtgtgctcactgctg
gactggaagcgctgcatggctgtccacctctggtacctgcttcctccaacagcttctatt
tccaaggcacttgccatgtacgagtcagcgtttcagaacacaccagagtgtgaaaaatac
gcctgctgtcctctgcctccttacctagaagattctggttgtgtaattgaagacgttgat
aatgcaggaagacctctgagagatgtctgtttccatttgttaaagctctacagtgacagg
cactatgatcttgaccagctgcttgatcccaggagtgtaacgtctgaccctctggactat
cgtctcagttggcacctgtgggaagtgctcagagccctgaattatacccatctattcaag
cagagtcaaggagtgctgaatgctagctacgctgcccagcttgaaagcgaaggtctttgg
gaatgggctgtttttatactgctgcatgagcctgatacgcacatacgggagaaggcagtg
cgtgaactcctgaatcggcattgcgttctctctgagacaccagagtcttgggccaaggag
acttttctgacgcagaggctctgcgtccccccggagtggattcatgaagcaaaggcagtt
cgagcaaggatggagggtgacaagcataaagaagccctcttcttgttcagggctgggcac
tggaaccagtgtcacaagctggttgtcaggcacttagcctcagatgctattattaatgaa
aactacaagtacctaaaaggattcctggaggatcttgcccctccagagcgtagtgcactc
atccaggactgggagatggcggggctggtctacctagattacatccgtgttattgagatg
cttgataggattcaacagctggattgttccacctacgagctggagcggttacataccaaa
gtgacatcgctgtgcaacaggatagagcagatccagtgccacagcgcaaaggaccgtctg
gctcagtcagatatggccaagcgcattgctaacctgctgcgggtggtcctcagcctgcag
cacgccccagagcccatctccgactccacgcctgacgtgcagcgtgtccctcttcgcctg
ctcgctccccacatcggacggctgcctatgccggaggactatgccttggaggagctccgc
agcctcacccagtcttacctacgggagctgacagtagtgactcactga

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