Calonectris borealis (Cory's shearwater): 142078081
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Entry
142078081 CDS
T11211
Symbol
LAMB1
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04510
Focal adhesion
cbor04512
ECM-receptor interaction
cbor04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
142078081 (LAMB1)
04518 Integrin signaling
142078081 (LAMB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
142078081 (LAMB1)
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Ortholog
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GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
ATG17_like
F5_F8_type_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
142078081
NCBI-ProteinID:
XP_074996711
LinkDB
All DBs
Position
1:complement(16361950..16407330)
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AA seq
1832 aa
AA seq
DB search
MALLSHVCWHHSTKQFGAIEHHTRRLPNPQPFAGFRALPHGLIALPLLSLILLSLRGRAA
LWSAAAQEPEYSYGCAEGSCYPATGDLLIGRAARLSASSTCGLRQPEPYCIVSHLQEDKK
CFICDSEDPFHDTLNPDSHRIENVVTTFDPNRLKLWWQSENGLENVTIQLNLEAEFHFTH
LIMTFKTFRPAAMLIERSSDFGKTWQVYRYFAYDCESSFPGISTGPMKKVDDIICDSRYS
DIEPSTEGEVIYRVLDPAFRIEDPYSPRIQNLLKITNLRVKFIKLHTLGDNLLDSRMEIR
EKYYYAIYDMVVRGNCFCYGHASECAPVDGFNEEVEGMVHGHCMCRHNTKGLNCEQCLDF
YHDLPWRPAEGRNSNACKKCNCNGHSSQCHFDMAVYMTTGNTSGGVCDDCQHNTVGHNCE
QCKPFYFQHPERDLRDPDVCEPCNCDPAGSQNGGICDRYTDFSTGLIAGQCRCKLFVEGE
RCDLCKEGFYGLSADDPEGCQSCACNPLGTHPGGNPCDSETGNCYCKRLVTGKQCNRCLP
EHWGLSNDMDGCRPCDCDQGGALNNNCSSQSGQCECRPHMFGRQCNQVEPGYYFISLDHY
IYEAEEASLGPGVNIIERQYTPDRTPSWTGIGFVRVPEGAYLEFYIDNIPYSMEYEILVR
YEPQLPDQWEKAVISVSRPGKIPTGSRCGNTVPDDDNQVVSLSPGSRYVVLPRPVCFEKG
LNYTIRLELPQYSSVDTEMESPYTLIDSLVLMPYCKSLDIFTVGGSGEDVVTNSAWETFQ
RYRCLENSRSVVKTPMTDVCKNIIFSISALLHETALSCQCDPQGSLSSVCDPSGGQCQCR
PNVVGRQCDRCAPGTFGFGPSGCRSCECHVRGSYNTFCDAETGQCHCFPGVYGRQCDRCL
PGFWGFPSCQPCHCNGHADDCSPYSGECLSCRDHTAGHNCERCQAGYYGDPVLGSGDHCR
PCPCPDGPESGRQFASGCYQDPVTLQVVCVCSVGYIGSRCDECASGFFGSPDEVGGACQP
CQCNNNIDTTDPEACDKKTGTCMKCLYHTEGENCHLCKEGYYGTALQQDCRKCVCNYLGT
VREDCEGSESCRCEAATGQCRCLPNVVGQTCDRCAPHTWRLASGAGCEQCGCDPARSLGP
ACNEFTGQCQCMPGFGGRTCRECQELFWGDPGVECQACDCNPHGIQTPQCNRTTGQCICN
EGVEGPRCDKCSRGYSGFFPDCVPCHQCFALWDVIISELANRTQQFLDRANALKITGVTG
PYQQTLNTLEEKLSEIKTIIAQNPAAEPLKNIGNLFEEAEKLTADVTVKIADIEENLSAL
AVKSNSTDTDLSALETDAKSLDHVVKELAEQLEFIKISDVRGALDSITKYFQMSLEAEER
VNASTVHPDSAVELSAQTRQEVEDLINEKEAQFKAKQEEQSRLLDELAGKLQSLDLSEVA
EKTCGTPAGASCAESECGGLNCRTDDGKKKCGGPGCDGLVTVAHNAWQKAMDFDRDILSA
LAEVEQLSRMVSEAKQRADEAKQNAQEVLLKTNATKEQVDRSNEDLRNLIKQIRDFLMQD
SADLDSIEAVANEVLNMEMPSTPQQLQALTEDIRERIESLSDVEVILQQSAGDIARAEML
LEEAKKASKGATDVKVTADMVKAALEEAEKAQNAAEKAIKQADEDIKGTQDLLTSIESEN
AASEETLNNATLRLFELEKNVEDLKQKAATNSENVDNIEEKIVTAKQNAEEVKKVLNTEL
NDKYKAVEDLIAKKTEESADARRKAGMLQDEAKALLAQANSKLQLLKDLENTYENNQKVL
EDKAKQLVELEETVRSLLQTISQKVAVYSTCL
NT seq
5499 nt
NT seq
+upstream
nt +downstream
nt
atggcactcctgagccacgtgtgttggcaccacagcaccaagcaattcggggccattgag
catcacacacgacggctgccaaacccccagcccttcgctgggtttcgggccttgccgcac
ggcctgatcgcgctgccgcttctctctctcatccttctctccctccgcggccgcgcagcg
ctgtggtccgcggcggcgcaggagcccgagtacagctacggctgcgccgaggggagctgc
taccccgccaccggcgacctgctcatcggccgcgccgcccgcctctccgcctcctccacc
tgcggcctccgccagcccgagccctactgcatcgtcagccacctccaggaggacaaaaaa
tgtttcatatgtgactccgaggatcccttccatgatactctcaatcctgacagtcatcgc
attgaaaacgtggtcaccacgtttgatccaaatcgcctaaagctctggtggcagtcggaa
aatggtttggaaaacgtgactatccagctgaacctggaggccgagtttcatttcactcat
ctcattatgaccttcaagacattccgtcctgctgcaatgttgatagaaagatcatctgat
tttggaaaaacgtggcaagtatataggtattttgcatatgactgtgagagctcatttcct
gggatttcaactggacccatgaagaaagtggatgatatcatttgtgattcccgatattct
gacattgaaccttcaacggagggagaggtaatatatcgtgttttagatcctgcttttcga
attgaagatccgtacagtccaaggattcaaaacctattaaagatcacaaatctgagagtc
aaatttatcaagctgcacacgctgggagataatctcttggactccaggatggagatcagg
gagaagtactactatgccatctacgacatggtggttcgcgggaactgtttctgctatgga
cacgccagcgagtgtgcgccagtggatggctttaacgaagaagtggaaggaatggtccat
gggcactgcatgtgcagacataataccaaagggttaaactgtgaacagtgtttggatttc
taccatgacttaccctggcgacccgcagaaggccgcaatagtaacgcatgcaaaaagtgc
aactgcaatggccactccagccagtgccactttgacatggctgtgtacatgacgacgggg
aataccagtgggggagtgtgtgacgactgccagcacaacaccgtgggacacaactgcgag
cagtgcaagcccttctacttccagcacccggagagagatctccgggaccctgacgtctgt
gagccttgcaactgtgacccagctggctcccaaaatggtggcatctgcgatcgctacact
gatttctccactggcctcattgccggacaatgccgttgtaaattatttgtcgaaggggag
cgttgtgacctctgcaaagaaggtttctatggcctgagtgctgatgacccagagggttgt
cagtcttgtgcgtgtaatcctctgggcacccaccccggggggaatccttgtgattcggag
acaggaaactgctattgtaagcgcctggtgacaggaaagcagtgcaatcgctgcctgcct
gagcactggggcctgagcaacgacatggatggatgtcggccgtgcgactgcgaccaggga
ggagcgctgaacaacaactgctcgagtcagtctggccaatgcgaatgccggccccatatg
tttggacgtcagtgcaaccaagtggagcctggctattacttcatttcgcttgatcattac
atctacgaggcggaggaagccagcttgggtcctggagtaaacataatagagcgccagtac
acgccggaccgcacaccatcgtggacaggcatagggtttgtaagagtccctgagggggcg
tacctggaattctacatcgacaacatcccctactccatggagtacgagattctggtccgc
tacgagccgcagttgccggatcagtgggaaaaagctgtgatcagcgtctcgcgcccaggc
aagattcccacgggtagccggtgtggcaatacagttcctgatgatgataatcaggtcgtc
tcactgtcacccggctccagatatgtcgttctcccgcggcccgtctgcttcgagaagggg
ctgaattacaccatccgcctggagctgccccagtactcctcggtggatacggagatggag
agcccgtacacactcattgactctcttgttctcatgccatactgcaaatcactggacata
ttcacagtgggaggctcaggagaagatgtggtcacgaacagcgcttgggaaactttccaa
agataccggtgtctggaaaacagcaggagtgttgtgaaaacccccatgacggacgtctgc
aagaacatcatattcagcatttctgctctattgcacgagaccgcgttatcgtgccagtgc
gacccccagggctccctgagttcggtgtgtgaccccagcggaggacagtgccagtgtcgt
cccaacgtcgtcggaagacaatgcgacagatgcgcccctggcacctttgggttcgggcca
agcggatgccgatcatgcgagtgccacgtccgaggctcttacaacaccttctgcgacgcg
gagacgggccagtgccactgcttccctggggtgtacgggcggcagtgcgaccgctgcttg
cctggcttctggggcttccccagctgccagccctgccactgcaacggccacgccgacgac
tgcagcccctacagcggggagtgcctgagctgccgggaccacacggcagggcacaactgc
gagaggtgccaggctggctactacggagaccccgtcctgggatcaggcgaccactgccgc
ccctgcccttgccctgatggccctgagagtggacgccagtttgccagcggctgttaccag
gatccggtcacactgcaagtcgtgtgtgtctgtagcgtgggatacataggcagtcgatgt
gatgaatgtgcgtctggcttctttgggagccccgacgaggttggcggcgcctgccagccg
tgccagtgcaacaacaacatcgacaccactgacccagaggcctgcgacaagaagacggga
acgtgcatgaagtgtctgtatcacacagagggggaaaactgccacctctgcaaagagggc
tactacgggaccgcgctgcagcaggactgcagaaagtgcgtctgcaactacctgggcacc
gtccgggaggactgcgagggctcggagagctgccggtgcgaggcagccacggggcagtgc
cggtgcctccccaacgtggtggggcagacctgcgaccgctgtgccccccacacgtggagg
ctcgccagcggcgccggctgcgagcagtgcggctgcgaccccgcacgctccctcgggcct
gcctgcaacgagttcacagggcagtgccagtgcatgccgggcttcggaggccggacctgc
cgggagtgccaggaactcttctggggcgacccaggcgtggagtgtcaagcctgtgattgc
aaccctcatggcatccagaccccgcaatgcaaccgcaccaccgggcagtgcatctgcaac
gaaggggtggaagggccgcgctgcgacaagtgctcccggggctactcgggcttcttccct
gactgcgtgccatgccaccagtgcttcgccctctgggacgtgatcatcagcgagctggct
aataggacccagcagttcctggacagggctaatgccctcaaaatcactggagtcactggc
ccataccagcagacgctcaacaccctggaggagaagctcagcgaaattaaaaccatcatc
gcccaaaatccagctgccgagcccctgaagaacatcggaaatctcttcgaggaagcagaa
aagctgacagcagatgttacagttaagatagctgacatagaagaaaacctgtcagcctta
gcagtgaagagcaatagcacagatactgacctgagcgcgctggagacagatgccaaaagt
ctagaccatgtcgttaaagaacttgcagaacagctagagttcatcaagatctctgatgtt
cggggagccttggatagtatcaccaagtatttccagatgtccctggaggcagaggagagg
gtcaatgcttccactgttcaccctgatagcgccgtggagctgtcagcacaaacgcggcag
gaagtggaagacttaatcaatgagaaagaggcccagttcaaggctaaacaagaggagcag
tcgcgccttctggatgaactcgcaggcaagctgcagagcctggatctctctgaagtagct
gagaagacgtgcggcactcccgcaggagcctcctgtgccgagtccgagtgtggcggttta
aactgtcgaacagatgatggaaagaagaagtgtggaggacctggctgtgacgggctggtg
accgtagctcacaacgcctggcagaaagccatggattttgacagagacatccttagtgca
ttagcagaagttgagcaactctccagaatggtttctgaggcaaaacagagagctgatgaa
gcaaaacaaaatgcacaagaagttttgctcaaaaccaatgctacaaaagaacaagtggac
agaagcaatgaagatctgagaaatcttattaaacagattagagacttcctaatgcaagac
agcgctgacctggatagcatcgaggcggtggctaatgaagtgctgaacatggagatgcca
agcactccccagcagctgcaagccctgacagaagatattcgtgagcgtatagaaagcctt
tctgatgttgaggtcattctgcagcagagcgctggagacattgccagagcagaaatgcta
ctggaggaagccaaaaaggcaagcaaaggtgcaacagatgttaaagtcactgccgacatg
gtgaaagcagcactggaagaagctgaaaaagctcagaatgcagctgaaaaagccatcaaa
caagctgatgaagacattaaaggaactcaagacctgctgacctcgatcgaatctgaaaat
gcagcatctgaagaaacactgaacaatgctaccttacgtctgtttgagctagagaagaat
gttgaagaccttaagcaaaaggctgctacaaattcagagaatgtggacaatatagaagaa
aaaattgttactgcaaaacaaaatgctgaagaagttaaaaaggtcctcaataccgagctg
aacgacaagtataaagcagtggaagatctcatcgccaagaagacagaagagtcggctgat
gccaggaggaaagccggcatgttgcaagatgaagctaaagccttgttggctcaagcaaac
agcaaactccagctgctcaaagacttggaaaatacatatgaaaacaatcaaaaagttctg
gaagataaagccaagcagttggtggagctggaagagacagttcgctccctcttacagaca
atcagccagaaggttgctgtttatagcacttgcttatga
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integrated database retrieval system
