Calonectris borealis (Cory's shearwater): 142078378
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Entry
142078378 CDS
T11211
Symbol
NHLRC1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
142078378 (NHLRC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cbor04121
]
142078378 (NHLRC1)
Enzymes [BR:
cbor01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
142078378 (NHLRC1)
Ubiquitin system [BR:
cbor04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
142078378 (NHLRC1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-C3HC4
RING_XB3-XBAT31
zf-C3HC4_2
NtrZ
Motif
Other DBs
NCBI-GeneID:
142078378
NCBI-ProteinID:
XP_074996941
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All DBs
Position
2:complement(101471910..101473827)
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AA seq
404 aa
AA seq
DB search
PPQPPPRLSAAGMAAAAAPEEEEAELSLLECRVCFERYGPGGQRRPRNLACGHVLCRGCV
GALCGPERRRLECPFCRRACGFAETSDCLPLLQLLEVLGPAGGSVLSALGRSGGGGAAGP
VPAGLGLRLSLGGWGSLVNPTGVAACRRSGRLAVAHDGKKRIHVFGPSGSCLHRFGERGD
AGNDIKYPLDVTVTSDGHVVVTDGGDCSVKAFDFEGRGVLAVREGFCLPWGLDATPESEV
ILTDSEAGALYRLTADFRKGKLKKCQMIRSQLISPRGVAVSQTSGAIVVIEHLKAQGPNN
SSTRVKIFSAEMDLIGQMDSFGLNLVFPSKIYTTAVAFDKEGRVIVTDVCSQAVICLGKP
EEFPIFNPLISHGLSYPVGLTYMANNSLAVLDSGDHSIKIYSST
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
ccgcctcagccgccgcctcgcctcagcgcagcggggatggcggcggcggcggcgccggag
gaggaggaggcggagctgagcctgctggagtgccgggtgtgcttcgagcggtacggtccc
ggcgggcagcggcggccgcggaacctcgcctgcgggcacgttctctgccggggctgcgtg
ggggccctgtgtggccccgaacgccggcggttggagtgtcccttctgccggcgggcctgc
ggcttcgccgagaccagcgactgcctgccgctgctgcagctgctggaggtcctgggcccc
gccggcggcagcgtcctctcggccttggggaggagcggaggcggaggggcggccgggccg
gtccccgcgggcctcgggctccggctgtccctggggggctgggggtcgctggtcaacccc
accggggtggcggcctgccggaggtcggggcgcctggctgtggcacacgacggcaagaag
aggatccacgtctttgggcccagcggatcctgcctgcaccggttcggggagcggggggac
gcgggcaacgatatcaagtacccgcttgatgtgacggtcacgtcggacgggcacgtggtg
gtcaccgatggcggggactgctccgtgaaggcctttgattttgagggaaggggggtcctg
gctgtccgggaaggtttctgtttgccctggggcttggatgccacccctgagagtgaagta
atcctgacggactcggaggcaggcgctctctaccgcttgacagccgacttcaggaagggg
aaattaaagaagtgtcagatgatccggtctcagctcatcagcccaagaggggttgcagtc
tcccagacctcgggtgctatcgtggtaatagagcacctgaaagctcaaggaccgaacaac
agcagcacccgagtgaagatattcagtgcagagatggatctcatcggccagatggatagc
ttcggtctgaacctcgttttcccctctaaaatatatactacagctgtggcctttgacaaa
gagggccgcgttatagtaacggatgtctgtagccaggccgtaatatgcttggggaaacct
gaggagtttcccatctttaaccctctaattagccacgggctttcttatcctgtaggactg
acttacatggcaaacaattccctcgccgttttagacagcggtgatcattcaataaaaata
tatagctccacctga
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