Calonectris borealis (Cory's shearwater): 142078412
Help
Entry
142078412 CDS
T11211
Name
(RefSeq) sodium channel protein type 5 subunit alpha-like
KO
K04842
voltage-gated sodium channel type X alpha
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cbor04040
]
142078412
Ion channels [BR:
cbor04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
142078412
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
GPHH
IQ
WLM
Motif
Other DBs
NCBI-GeneID:
142078412
NCBI-ProteinID:
XP_074996976
LinkDB
All DBs
Position
2
Genome browser
AA seq
1818 aa
AA seq
DB search
MAEFLLPGTNNFRKFTYESLAAIEKRIAAKRNSRRNTIDQKPEEKPRPQLDLKAFQKLPA
LYGNPPPELIGEPLEDLDPYYKDRKIFIVLNKQKTIFRFTATRALWILSPFHPIRRTAIK
ILVHSLFTLFIMCTILTNCVFMALTESSKVSQSSLWNKYVEYTFTGIYTFESLIKILARG
FCLNEFTFLRDPWNWLDFSVIVMAYVGAFSNLGSVSVLRTFRVLRALKTISVVPGLKIIV
GALIQSVKKLANVMILTLFCLSVFALIGLQLFKGNLRYKCIKNSTESGYFNKTWESYDMF
ANDTAYFAKKAGTPDILLCGPGAGICPPDYICLKIGPNPDYGFTSFDTFGWAFLSLFRLM
TQDYWERLYQQTLRASGKVYILFFMLVIFLGSFYLVNLILAVVTMAYEDQNKATIAETEA
KERKFWEAMELLQKEQESLAIKGIDILSISSFEASSLSTKEMKERSNRKKRNKSLGIEDN
EEEQQFPKSQSTDNQRKLPAVNDESSMMHLPPHLSVEYFNEALQRQRAASAVSVITSVLE
ELEESQRRCPPCLNDFALKYLIWDCCPFWLRIKKKVAAFIKDPFIDLTITVCIVMNTLFM
ALEHNNMSENFKSMLNVGNLVFTGIFTAEMILKIIALDPYYYFQQRWNIFDSIIVTLSLI
ELSLPKHKGKKEKRKGGTLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSLGALSNLTLV
LAIIVFIFAIVGVQLFGRSYGENSCKIHKNCKPRWHMMDFFHSFLIIFRILCGEWIETMW
DCMVVAERPLCLLVFLLVMVIGNLVVLNLFIALLLNSFSTDCLQTAEDDREMNNLRIAVA
RIHKGFHFVKSVTWDTCCGKLRRIKKAHRKKIKLTAQNPLGFKHEEIKNCKDNYNNEWAE
KNGDKCLGLEDFITNPNVFVCVPIAEAENTSEGFEDDDKLSTFTDIEYSKQFDSFSSSEG
STVDLTNPEDLLRQIPEFAEDFKTPEKCFPEGCVRYFRCSVGSAIKFGGETWWNLRKTCY
QIVEHSWFESFIIFMILLSSGALAFEDIHINERKSIKNMLSFLDKMFTFIFVLEMLLKWV
AYGFKKYFTNAWCWLDFLIVDVSLIDLFDSSFGPMKSLRTLRALRPLRALSRFEGMRVVI
NALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFGKCVNLTEEDADLNHLINNMSDCR
TYNNTKKIFWVNVKVNFDNVGSGYLALLQVATFKGWMTIMYAAVDSREKNEQPQMEHSLF
MYLYFVNFIIFGSFFTLNLFVGVIIDNFNQQKKKISGEDIFMTEEQKKYYNAMKKLGSKK
PQKPIPRPLNRYQGFLFDIVTHQAFDVVIMILICLNMITMMVETYEQSVTKTNVLNKINI
LFVAVFTAECVLKLVALRQYYFSNAWNIFDLVVVIMSLIALLLSGIGKAFEQFLPPTLFR
VIRLARVGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMANFAYVK
MEDGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNTGPPYCDPNTNGTIGECGKPA
IGIIYFVSYIIISFLIVVNMYIAVILENFNAATEESTEPLGEDDFDIFYEIWEKFDPEAT
QFITFSALSDFADALAEPLRVPKPNKIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSG
EMDTLKVQMEEKFMAANPSKKSYEPISSTLRHRQEEASATVIQRAYRSHLLLRSIKHASY
LYHHRTCSGDSLGGAAPEKEGLIASMMGENYGRSPDKSETLSSASFPPSYDSVTRASSGN
LMVENGEITGNQQSPDVK
NT seq
5457 nt
NT seq
+upstream
nt +downstream
nt
atggccgagttcttactacctggtaccaacaacttccgtaagttcacttacgaatccttg
gctgctatcgaaaagaggattgctgccaagaggaattctcgaagaaatactatagaccag
aaacctgaggagaaaccacgtcctcaacttgacctaaaagctttccagaagttaccagct
ctctatggaaatcctcctccagagctcattggggaaccactggaggatctcgacccgtac
tacaaagatcgtaagattttcatagtgctaaacaaacagaaaacgatcttcagatttact
gctacacgtgccttatggatcctcagtcctttccatccaatccgaagaacagcaattaaa
attttagtacattcattattcactttgtttatcatgtgcactattttaactaattgtgta
ttcatggctctgaccgagtcctctaaggtttctcaatcttctttgtggaacaagtatgtt
gaatatactttcactggcatttacacttttgaatcattgataaaaatattggcaagaggg
ttctgtctaaatgaattcactttccttcgagatccctggaactggttggatttcagtgtt
atcgttatggcgtacgtgggagcatttagtaacttgggaagtgtgtcagtccttcggact
ttcagggttctgagagctttaaaaaccatttcagtagtcccaggactcaagatcattgta
ggggcacttatccagtctgtcaagaaacttgccaatgtgatgatcctgactcttttctgc
ctgagtgtctttgccctcataggcctccagctttttaagggcaatctaagatacaagtgt
atcaagaactctacagagtcaggttattttaacaaaacatgggaatcctatgacatgttt
gctaatgatacagcatactttgctaagaaagcgggcaccccagatattttgctatgtggt
cctggtgctgggatctgtcctccagactatatatgcttgaaaattgggccaaatcctgat
tacggtttcaccagttttgatacatttggctgggcttttctttccttattccgcctgatg
acccaggactactgggagcgtctgtaccagcagaccctcagagcttctgggaaggtgtat
atactcttcttcatgctggtcatctttctgggctcattttatctagtcaacttgattctg
gctgtagtaacaatggcatacgaagaccagaacaaggccaccattgctgaaacggaggca
aaggaaaggaaattttgggaagccatggaattattacagaaggagcaggagtcattggct
attaaaggaattgatatcctgtcaattagctcctttgaagcctcttctctgtctaccaaa
gaaatgaaagaaagaagcaataggaaaaagagaaataagtccttggggatagaagataat
gaagaagaacaacaattccccaagtcacagtccacagataatcagcgaaagttgccagct
gtaaatgatgagagcagcatgatgcatttgcctcctcatctgtcagtggagtactttaac
gaggcacttcagagacaaagggcagcaagtgcagtcagcgtaattaccagtgtcttggag
gaacttgaagaatcccagcggagatgcccaccgtgcctgaatgactttgctttaaagtat
ctaatttgggactgttgtccgttttggttgagaatcaagaagaaagtggctgctttcata
aaggatccttttattgatctcaccatcactgtttgcattgtgatgaacactttgttcatg
gcactggagcacaataatatgtcagaaaactttaaatcaatgcttaatgtcggcaacttg
gtttttacaggaatctttactgcagaaatgatcttaaaaatcattgctctagatccctat
tattattttcagcagcgctggaatatttttgacagtataattgtcacattgagtttaatc
gaactgagtttacccaaacataaaggcaagaaagaaaagcgaaaaggaggaaccctgtca
gttttacgatccttcagactgctgagggtcttcaaactggcaaaatcctggccaacttta
aacacactaattaaaatcattggtaactccctgggagcactgagtaatctgaccctcgtc
ctggcaatcatcgttttcatttttgctatagtaggggtgcaactttttgggagaagctat
ggggagaacagctgtaaaatacataaaaattgcaagccacgctggcacatgatggacttt
ttccactcctttctcatcatttttcgaattctatgtggagaatggatagagaccatgtgg
gattgcatggtggtcgctgaacgaccgctgtgccttcttgtctttctgctggtcatggta
ataggaaatttagtggttctcaaccttttcattgcactgctgctgaattccttcagtacc
gactgtctccagacagcagaggatgacagagagatgaacaatcttcggattgccgttgct
cggattcacaagggatttcactttgtgaagagtgttacatgggatacctgttgtggaaag
ctcaggcgtataaagaaagcacacaggaagaaaatcaaattgactgcacagaacccactt
gggttcaagcatgaagaaataaaaaattgtaaagacaattacaataatgaatgggctgag
aaaaatggggacaaatgcttaggtcttgaagattttattaccaatcccaatgtatttgtt
tgtgttcctattgctgaggcagagaatacaagtgagggttttgaagatgatgataagctg
agtacatttacagacatagaatacagcaaacagtttgacagcttcagctcttctgaaggc
agcacagtggatctgacaaatcctgaagatcttttgaggcaaattccagagtttgctgaa
gacttcaagactccagaaaaatgttttccagaaggttgtgttcgatactttcgttgttct
gtgggtagtgccataaaatttggaggagaaacatggtggaatctgagaaaaacctgctac
cagattgttgaacactcctggtttgaatcctttatcatattcatgatccttctgagcagt
ggagccctggcgtttgaagacatccatataaatgagagaaaaagcattaaaaatatgttg
tcgtttcttgacaaaatgttcactttcatttttgttctggagatgctcctgaaatgggtg
gcttatggcttcaagaagtatttcaccaacgcctggtgctggctggacttccttattgta
gatgtctctttaatagacctcttcgacagttcatttggccccatgaaatctcttagaact
ctccgagctctgagacccttaagagcattgtcacgatttgaagggatgagggtggtgatc
aatgcccttgtgggagccatcccttccatcatgaatgttctgcttgtctgcctcatcttc
tggctcatctttagcatcatgggagtgaacctctttgctgggaagtttgggaaatgtgtc
aatctgacagaagaagatgcagatttaaatcatttgatcaataacatgtcagactgtaga
acgtataataacacaaaaaaaatattctgggtcaatgttaaagtcaactttgataatgtt
ggttctggctacttggctcttcttcaggtggcaacatttaaaggttggatgaccatcatg
tatgcggcagtagattcacgagagaaaaatgagcagccgcaaatggagcacagtctattt
atgtatctctactttgtgaacttcatcatctttggatctttctttaccctgaatctcttc
gttggtgttattattgacaactttaaccaacaaaagaaaaagataagtggggaagatatc
tttatgacagaagaacagaaaaaatattacaacgcgatgaaaaagttgggatccaagaaa
cctcaaaaacccattccaagaccactgaacagataccaagggttcctttttgacattgta
acacaccaggcctttgatgttgtaatcatgattctcatctgccttaacatgatcaccatg
atggtggaaacctatgagcaaagtgtaacgaagactaacgtccttaacaaaatcaacata
ctctttgttgccgtctttactgcagaatgtgtactgaaattggtggctctgaggcagtac
tatttctcaaatgcttggaacatatttgatttagttgttgtgatcatgtcacttattgct
ttactgctttctggcatcggtaaagcatttgaacaattcttaccacctacactcttcagg
gtcattcgcttggctcgtgttggacgaatactgagactcatccgggctgccaaaggaatt
cgaactctgctttttgcattaatgatgtccctacctgctctatttaacattggcctcttg
ctttttctggtcatgttcatttatgctatttttggtatggctaactttgcctatgtgaag
atggaagatggcattgacgatatgttcaacttccaaacctttgctaacagcatgctctgt
ctcttccaaatcaccacgtcagctggttgggatggtcttctcagtcctattttaaacact
gggccaccgtactgtgatccaaacacaaatggtactataggcgaatgtggtaaacctgcc
ataggtattatttattttgtaagttacatcattatatcatttctcattgttgtaaacatg
tatatagctgttattctggagaacttcaatgctgctactgaggaaagtacagagccttta
ggggaagatgactttgacatcttttatgaaatctgggagaagtttgatcctgaggcaact
cagtttataactttctctgcactttcagactttgcagatgctctggctgaacctttacgt
gtaccaaaaccaaacaaaattgaactcatagcaatggacctgcctatggtcagtggagat
aggatccactgcttggatatcttgtttgcttttacaaaaagagtgttaggagattctggg
gagatggatactcttaaagtacaaatggaggagaagttcatggctgccaatccatccaaa
aaatcctatgagccaatctcctctactctcagacacagacaagaggaagcttctgccact
gtcatccagcgtgcctacaggagtcatttgctcctgcgctccataaagcacgcttcttac
ctgtaccatcacagaacttgcagtggtgacagtcttggaggtgctgctccagaaaaagaa
ggacttattgcatctatgatgggtgaaaactatggtaggagtcctgacaagtctgaaact
ttgtcctccgcatcctttcctccatcatacgacagtgtcacaagagccagtagtggcaat
ctcatggttgagaatggagaaattacaggtaaccaacaatctccagacgttaaatag
DBGET
integrated database retrieval system
