Calonectris borealis (Cory's shearwater): 142078490
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Entry
142078490 CDS
T11211
Symbol
TOP1MT
Name
(RefSeq) DNA topoisomerase I, mitochondrial isoform X1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbor03032
]
142078490 (TOP1MT)
Enzymes [BR:
cbor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
142078490 (TOP1MT)
DNA replication proteins [BR:
cbor03032
]
Eukaryotic type
DNA Topoisomerases
142078490 (TOP1MT)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
142078490
NCBI-ProteinID:
XP_074997162
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Position
2:2170404..2188041
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AA seq
894 aa
AA seq
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MCLGFGIIALLSHFQPFFSSGCFPQVPKPSDGAAGGAASLSGEPGGLEMDVDITTMREGE
EKELDPPVPPQRGDAQDLKRKKEREKKQEQRKQQEKGLLRKGGSKKDEFEGSPGDVMEGI
EEEEGADGDRNWAAGGGRAKRGSSSTQGEGDGRQKQKGKAEKRKKVKMEGEKKMGKKKIK
KEKMLEEEQELEKTDEEEGEKGVGNELEEREGVGKEYEDEKGVKEEEEEADEKGDERWGE
TQSTEIGQEVKEDEAGKGDVPRKEKKQKIKEKKPEGEMKEKRKKSKEKSEEEETPGKTRK
RKSKEEGEEKNNKKAKKEEKEEEKKEKAENKWKWWEEEKKEDGVKWTQLEHRGPYFAPLY
EPLPDDVQFYYDGKPLKLSLATEEIATFYAKMLDHEYTTKEIFQNNFFNDWRKEMTSKEQ
KIIKDLDKCDFREIHKYFVDKSEARKALSKEDKQKLKEEADKIQEEYGYCILDGHREKIG
NFKTEPPGLFRGRGDHPKMGMLKKRIMPEDVIINCSKDSKIPKPPEGHKWKEVRFDNTVT
WLASWTENIQNTLKYIMLNPSSKLKGEKDWQKYEVARRLKDVVHKIRSQYRADWKSKEMK
KRQRAVALYFIDKLALRAGNEKEEGETADTVGCCSLRVEHIKLHDKLDGQEHVVEFDFLG
KDSIRYYNKVSVEKLVFKNLQLFMKNKDPADDLFDRLNTSILNRHLQSLMDGLTAKVFRT
YNASITLQEQLKALTNSEDNVAGKLLSYNRANRAVAILCNHQRSTPKTFEKSMQNLQTKI
DAKKQQVEEAQQELKKAEDEFEDTKDAKAEANVEKKKKLLKRLEEQLAKLNVQATDKEEN
KQIALGTSKLNYLDPRISIAWCKKFGVPIEKIYNKTQREKFAWAIDMADEDFEF
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttgggctttgggataatcgctctcctttcccattttcaacctttcttctcttct
ggctgcttcccacaggtcccaaagccaagtgatggtgctgctggtggggctgcatccctt
tctggagagcctgggggtttggagatggatgtggacatcaccactatgagggagggtgag
gagaaggagctggacccccctgtcccaccacagcgaggggatgcccaagacctgaaaagg
aaaaaagaaagagagaagaaacaagagcaaaggaagcagcaggaaaagggattgctgaga
aaaggagggagcaagaaggatgaatttgagggaagtcctggggatgtgatggagggcatc
gaggaggaggagggtgctgatggggacaggaattgggcagcgggagggggcagagccaag
cgagggagcagcagcacccagggagagggtgatgggaggcaaaagcagaaggggaaagca
gaaaagcgcaagaaggtaaaaatggagggggagaagaagatggggaagaagaaaataaag
aaggaaaaaatgttggaagaggagcaagagctggagaagacagatgaggaggaaggagaa
aaaggagtgggaaatgaactggaggagagagaaggggtgggaaaggaatatgaagatgag
aaaggagtaaaggaggaggaagaggaggcagatgagaaaggggatgaaagatggggagag
acccagagcacagagattgggcaggaggtgaaggaggatgaggcagggaagggagatgtg
ccaaggaaagagaaaaagcagaaaatcaaggagaaaaagccagaaggggaaatgaaagag
aagaggaagaagagcaaagagaaaagtgaagaggaggagaccccaggcaaaacccggaaa
aggaaatctaaggaagaaggagaagaaaagaacaacaaaaaggctaaaaaggaggagaaa
gaggaagaaaagaaagaaaaggcagaaaataagtggaaatggtgggaagaggagaagaaa
gaagacggggtaaagtggacgcaactggagcaccgaggaccctacttcgcccccctctac
gagccattgcctgatgatgtgcagttttattacgatggcaaacccctgaagctaagcctg
gccacggaggaaattgccaccttctatgccaaaatgctcgatcatgaatacacgaccaag
gagatcttccagaacaacttcttcaatgactggaggaaggagatgacctcaaaggagcag
aagataatcaaggacctggacaagtgtgacttcagggagatccacaagtactttgtggac
aaaagtgaggcacggaaagcactctccaaagaggataagcagaaactgaaggaggaggca
gataagatccaggaggagtatgggtactgcatcctggatgggcaccgggagaagataggc
aacttcaaaactgagccgccggggctgttccgtggacgtggtgaccaccccaaaatgggc
atgctgaagaagaggatcatgccagaagatgttatcatcaactgcagcaaggactccaag
atccccaagccaccagaagggcacaagtggaaggaggtgcgctttgacaacacggttacc
tggctggcctcgtggacggaaaacatccagaacactttgaagtacatcatgttgaacccc
agctccaagctgaagggggagaaagactggcagaagtatgaggtagcccggcgcttaaag
gatgttgtccacaaaatccgttctcagtaccgagccgattggaagtccaaggagatgaag
aagcggcaaagagcagtggccctctacttcattgataagctggccctgcgagctggcaat
gagaaggaggaaggggagactgcggacacagttggctgctgctccttgcgtgtggagcac
atcaagctgcatgacaagctggatgggcaggagcacgtggtggagtttgacttccttggg
aaagactcgatccgctactacaacaaagtgtcggtggagaagctggtgttcaagaacctg
cagctgttcatgaagaacaaggacccagcagatgacctctttgacaggctcaatacatcc
atcttgaacagacacctccagagtctgatggatggtttgactgccaaagtgttcaggacc
tacaatgcctccatcaccctgcaggagcagctcaaggcactcactaactctgaagacaat
gttgcaggaaagctcctctcctacaaccgagctaaccgagctgtggccatcctgtgcaac
catcagaggtctacaccaaaaacctttgagaagtcgatgcaaaacctccagaccaagatc
gatgccaagaagcaacaggtggaggaagcccagcaagagctgaaaaaagctgaagatgag
ttcgaagacacaaaagatgccaaagcagaagccaacgtggagaagaaaaagaagctgttg
aagcggctggaagagcagctggccaagctgaacgtccaggccacagacaaggaggagaac
aagcagatagctctgggcacgtccaagctgaattacctggaccccaggattagcatagcc
tggtgcaagaagtttggcgtgcccattgagaagatctacaacaagacgcagagggagaag
tttgcctgggcgatcgacatggccgatgaggactttgaattctga
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