Calonectris borealis (Cory's shearwater): 142078525
Help
Entry
142078525 CDS
T11211
Symbol
WASHC5
Name
(RefSeq) WASH complex subunit 5
KO
K18464
WASH complex subunit strumpellin
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
142078525 (WASHC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbor04131
]
142078525 (WASHC5)
Membrane trafficking [BR:
cbor04131
]
Protein recycling
Others
WASH complex
142078525 (WASHC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Strumpellin
HEPPP_synt_1
DUF3106
SNaCT8
Motif
Other DBs
NCBI-GeneID:
142078525
NCBI-ProteinID:
XP_074997264
LinkDB
All DBs
Position
2:12928237..12956990
Genome browser
AA seq
1159 aa
AA seq
DB search
MVDFLAENNLCGQAILRIVSCGNAIIAELLRLSEFIPGVFRLKDKADQQKYGDIIFDFSY
FKGPETCEGRLEAKPELLDLDEEFRENNIEILTRFYLAFQSVHKYIVDLNRYLDDLNEGI
YIQQTLETVLLNEDGKQLLCEALYLYGVMLLVIDQKIEGEVRERMLVSYYRYSAARSSAD
SNLDDICKLLRSTGYSSQPGAKRPPNYPESYFSRVPISETFISMVIGRLRSDDIYNQVSA
YPLPEHRSTALATQAAMLYVILYFDPSILHTQQAKMREIVDKYFPDNWVISIYMGITVNL
AEAWEPYKAAKTALNYTLDLSNVKEQASRYAAVTERVHTQVQQFLKEGCLREELVLDNIP
KLLNCLRDCNVAIRWLMLHTADTACDPNNKRLRQIKDQILTDSRYNPRILFQLLLDTAQF
EFILKEMFKQMLSEKQTKWENYKKEGSERMTELADVFSGVKPLTRVEKNENLQAWFREIS
KQIMSLNYDDSTAAGRKTVQLIQALEEVQEFHQLETNLQVCQFLADTRKFLHQMIRTINI
KEEVLITMQIVGDLSYAWQLIDSFTSIMQESIRVSPSMVTKLRATFLKLASALDLPLLRI
NQANSPDLLSVSQYYSGELVSYVRKVLQIIPESMFTSLLKIIKLQTHDIIEVPTRLDKDK
LRDYAQLGPRYEVAKLTHAISIFTEGILMMKTTLVGIIKVDPKQLLEDGIRKELVKRVAL
ALHRGLIFNPRAKPSELMPKLKEMAATMDGFHRSFEYIQDYVNIYGLKIWQEEVSRIINY
NVEQECNNFLRTKIQDWQSIYQSTHIPIPKFTPVDESVTFIGRLCREILRITDPKITCYI
DQMNTWYDIKTHQELTNSRLFSEIQDTLGTFGLNGLDRLLCFMIVKELQNFLSMFQKNIL
RDRTVQETLKALMNAVSPLKGIIANSSKVYSAAIAKTQKIWTAYLDSIMKVGQMQILRRQ
ITNELNYSCRFDSKHLAAALENLNKAILADIEAHYQNPSLPYPKEDNTLLYEITAYLEAA
GIHNPLNKIYITTKRLPYFPTVNFLFLISQFPKLQYNRNLGVVCKRPADQIDWLPLVLGL
LTLLKQFHSRYTEQFLALIGQFIRSTMEQCTSQKIPEMPADVVGALMFLEDYIRYTKLPR
KVVEAHVPSFIFDEFRTVL
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggttgattttctagctgaaaacaatctctgtggtcaggcaattcttcggattgtctcc
tgtggaaatgccatcattgcagaacttctgagactttctgaatttattcctggtgttttc
aggctaaaagacaaggctgatcaacagaagtatggggatatcatatttgatttcagttat
tttaaggggcctgagacatgtgaaggcagattggaagccaaacctgagttattggattta
gatgaagagtttcgtgaaaacaacattgaaattttgacaagattttatctagcttttcag
agtgtacataaatacattgtagatttaaacagatatttagatgacctcaatgaaggaatt
tacattcagcaaacattagaaacggtcctccttaatgaagatggaaaacagcttctatgt
gaagctctctatttatatggagtcatgctactggtcattgaccagaagattgaaggagaa
gtcagagaaagaatgttggtttcctactacagatacagtgcagcccgatcctctgctgat
tccaatttagatgatatctgtaaattgcttcgaagcactggatactcaagccaacctgga
gctaaaagacctccaaactaccccgagagttacttcagcagggtacccataagtgaaaca
ttcattagcatggttattggccgcttacggtcagatgacatttataaccaggtttctgca
tatccgttaccagaacaccgcagcactgccctggctactcaggctgctatgctctatgtg
atactgtattttgacccttctattcttcacactcaacaagcaaaaatgagagagatagtg
gataaatactttccagataattgggttattagcatttacatgggaatcactgtaaatcta
gcagaagcatgggaaccctacaaagctgctaaaactgccctcaactacacgctggatctt
tcaaatgtcaaagagcaggcaagcagatatgctgcagtcactgagcgagtgcacacccag
gtgcagcagtttctcaaagaaggctgtctaagggaagagctagtgctggacaacattccc
aagctgctgaattgcctgcgagactgcaacgtagcaatccgctggctgatgcttcacact
gcagacacagcttgtgatccaaataacaaacgtctccgccagataaaggatcaaattcta
acagactcaaggtacaatcccaggatccttttccagcttcttctggatacagctcaattt
gaattcattttgaaagagatgttcaagcagatgctgtcagaaaaacaaacaaaatgggag
aactataaaaaagagggatctgaaaggatgactgagcttgctgacgtcttctcaggagtt
aaacctcttactagagtggagaaaaatgaaaatcttcaggcttggttcagagaaatctcc
aagcaaataatgtctctaaactatgatgattccaccgcagcaggcagaaaaactgtgcag
ctaatacaggcactggaggaggtccaagagtttcaccagctggaaactaacctgcaagtt
tgccagtttctggctgacacccgcaaatttctccatcagatgatccgaactatcaacatc
aaagaagaggtcttgatcaccatgcagatagttggtgatctttcttatgcttggcaatta
attgacagctttacatctattatgcaggaaagcataagagtcagtccatctatggtaact
aaactcagagccacttttctcaagcttgcttctgctcttgacttgccacttctccgtatc
aatcaagcaaacagtcctgatcttctcagcgtatcacagtattattctggcgaattggtt
tcctatgttagaaaggttctacagataattcccgaaagcatgtttacatctcttctcaaa
attataaagcttcagactcatgatatcattgaagtgcctactcgccttgataaggacaag
ctacgagattatgctcagcttggaccacgatacgaggttgccaagctaacccacgcgatt
tcaatcttcactgaaggtatcctcatgatgaaaactactttagttggtatcatcaaggtg
gacccaaaacagttactagaggatggaataaggaaggagctggtaaaacgggtagcccta
gctcttcacaggggactcatctttaatcctagagccaagccaagtgaactgatgcccaaa
ctgaaagaaatggcagccacaatggatgggttccatcggtcatttgaatatatccaggat
tatgtcaacatatacggcttaaaaatttggcaagaggaagtgtctcgtattattaactac
aatgtggaacaggagtgcaataacttcttaagaacaaagattcaagactggcaaagcata
taccagtctactcatattcccataccaaaattcacacctgtggatgaatctgtaacattt
attggtcggctttgtagagaaatcctgaggatcacagacccaaaaatcacgtgttacatt
gaccaaatgaacacctggtatgatatcaaaactcatcaggaattaaccaatagtcgtctc
ttctcagagatccaagatactttaggtacctttggtctcaatggtttagacaggctgctg
tgtttcatgattgtaaaggaactgcagaatttcctcagtatgtttcagaaaaatatattg
cgtgacaggacagtacaggagaccttaaaagcacttatgaatgctgtcagtcctctcaaa
ggaattatagcaaattcaagcaaggtttattccgcagcgattgcaaaaactcagaagatc
tggacagcatatttagactccattatgaaggttggccagatgcaaattttaagacgacag
attaccaatgaattaaattattcctgcaggtttgactccaagcatttggctgctgctttg
gaaaatctcaataaagcaatactggctgacattgaagcacattatcagaacccatcacta
ccttatcctaaagaagacaacactcttttgtatgaaatcacagcttatctggaagcagct
ggcattcacaatccattaaataagatctacataacaacaaaacgtctgccatattttccc
actgtcaacttcctatttctcatttcccagtttccgaaactccagtacaacagaaattta
ggagtggtgtgcaaacggccagctgatcaaattgactggcttcctttagttctgggactc
cttaccctgttgaaacagtttcactcaagatacacagaacaatttctggctctgatcggt
cagtttattcgttcaacaatggaacagtgcacaagccagaagataccagaaatgcctgct
gatgtagtgggtgccctcatgttcctggaagattacattcgctacacaaagttaccaaga
aaggttgttgaagcacatgtgcctagcttcatttttgatgaattcagaactgttctatga
DBGET
integrated database retrieval system
