Calonectris borealis (Cory's shearwater): 142078547
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Entry
142078547 CDS
T11211
Symbol
SNTB1
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
142078547 (SNTB1)
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Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
142078547
NCBI-ProteinID:
XP_074997331
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Position
2:14783394..14900192
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AA seq
522 aa
AA seq
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MAVAAAGGGGGGRAQRSGWLEVLVRERWHKVLANLGGEALVLSGEERPDGAAHNGLGGDG
AACRGAEGGGGAAAVRTAFTDPPEQVPEAVSNKKRCVKVLKQELGGLGISIKGGKENKMP
ILISKIFKGLAADQTQALYVGDAILAVNGTDLRDATHDEAVQALKRAGKEVLLEVKYMRE
ATPYVKKGSPVSEIGWETPPPESPRLGCASADPLSQLSLSIHRDKKTIPLKMCYVTRNMT
VSDPENRLIEVHSPDAKHTVVLRSKDSATAQAWFNAIHSSVNELIPKVIAEVRDQLGKTG
IAGSREIRHLGWLAEKVPGDNEKHWKPVLVVLTEKDLLIYESMPRIKEAWFSPLHTYPLL
ATRLVHSGPGKGSPQSGVDLSFATRTGTRQGIETHLFRTETSRDLSLWTRSVVQGCHNSA
ELISEITTSCTYKSQECRLTIHYEHGFSLTTEPHDGAFSKTIAQYPYEKLKMSSDDGIRM
LYLDFGGKDGEIQLDLHSCPKPIVFIIHSFLSAKITRLGLVA
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagcggcggcgggcggcggcgggggcggccgggcgcagcgcagcggctggctg
gaagttttggtgcgggagcgctggcacaaagtgctggccaacttgggcggcgaggcgctg
gtgctgagcggcgaggagcgccccgacggcgcggcccataacggcctgggcggcgatggg
gcggcgtgccgcggggccgagggcggcgggggggcggcggcggtgcgcaccgcctttacc
gacccccccgagcaggtgcccgaggccgtctccaacaagaagcggtgcgtgaaggtgctg
aagcaggagctgggcgggctgggcatcagcatcaaggggggcaaggagaacaagatgccc
atcctcatcagcaagatcttcaagggcctggcggctgaccagacccaggccctctacgtg
ggcgatgccatcctggccgtcaacggcaccgacctgcgggatgccacccacgacgaggcg
gtgcaggcgctcaaacgggccggcaaggaggtgctgctggaagtgaaatacatgagagaa
gcaaccccttatgtgaagaaaggctctcctgtttcagaaattgggtgggagacacctccc
cctgaatctccccgcttgggttgcgcctctgctgacccactgtcgcagctttcgctctcc
atccacagagacaagaagacaataccgctcaagatgtgctatgtgacgcgcaacatgacg
gtgtcagaccccgaaaacagacttattgaagttcattcacctgatgccaagcacaccgtg
gtgctcaggagtaaggattcagctacagcccaagcctggttcaatgccatccactccagt
gtcaatgagctcatccccaaggtgattgcagaggtcagagaccagctgggtaaaacaggg
attgctggaagtcgagagattaggcatctaggctggcttgcagaaaaggtgccaggagac
aacgagaagcactggaagccagtgttagtggtcttgacggagaaagacctcttaatatat
gagagcatgccacggataaaggaagcttggttcagccctctgcatacctaccccctgcta
gccaccaggttggtccattctggcccaggaaaaggctcaccacagtcaggggtggatctg
tcttttgcaacccgtaccggtacaaggcaagggattgaaacccatttgttcaggacggag
actagccgagacctctcactgtggacgagaagcgtagtgcagggctgccacaattctgcg
gagctcatctcggaaatcaccacatcttgcacatacaaaagccaggagtgccgtttgacc
atccattatgaacacggattctctcttacaactgaaccgcatgatggtgccttctctaag
acaattgcacaatatccctacgaaaaactgaaaatgtcctcagatgatgggataaggatg
ctttatttagactttggaggaaaggatggagaaattcaactggaccttcattcctgtcca
aaaccaattgtattcatcattcattccttcctgtcagcaaagattacaagactgggcttg
gtggcataa
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