Calonectris borealis (Cory's shearwater): 142078716
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Entry
142078716 CDS
T11211
Symbol
ARFGEF1
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1 isoform X1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
142078716 (ARFGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbor04131
]
142078716 (ARFGEF1)
Membrane trafficking [BR:
cbor04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
142078716 (ARFGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
DCB
Sec7-like_HDS
TPR_28
Motif
Other DBs
NCBI-GeneID:
142078716
NCBI-ProteinID:
XP_074997784
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All DBs
Position
2:39029200..39128145
Genome browser
AA seq
1846 aa
AA seq
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MYEGKKTKNMFLTRALEKILADKEVKKAHHSQLRKACEVALEEIKAETEKQSPPHGEAKP
GSSTLPPVKSKTSFIEADKYFLPFELACQSKCPRIVSTSLDCLQKLIAYGHLTGNAPDST
APGKKLIDRIIETICGCFQGPQTDEGVQLQIIKALLTAVTSQHIEIHEGTVLQAVRTCYN
IYLASKNLINQTTAKATLTQMLNVIFARMENQALQEAKQMEKERHRQQHHLQQSPVSHHE
PESPQLRHIPTQTDQLSKEQERELDHSTNDVDKNLQEDIEAENGSDISSAENEQTEADQA
TAAENLSKADGGTYDGESNECEEKAQEIVESIVQEMVNIVVGDVEGTAESAGGDGTIVTL
EDGSDSENIQANGIPGTPISVAYTPSLPDDRLSVSSNDTQESGNSSGPTPGAKFSHILQK
DAFLVFRSLCKLSMKPLSDGPPDPKSHELRSKILSLQLLLSILQNAGPVFRTNEMFINAI
KQYLCVALSKNGVSSVPEVFELSLSIFLTLLSNFKTHLKMQIEVFFKEIFLYILETSTSS
FDHKWMVIQTLTRICADAQSVVDIYVNYDCDLNAANIFERLVNDLSKIAQGRGSQELGMS
NVQELSLRKKGLECLVSILKCMVEWSKDQYVNPNSQTTLGQEKPTEQDSNETKHPETINR
YGSLNSLDSTASSGIGSYSTQMSGTDNPEQFEVLKQQKEIIEQGIDLFNKKPKRGIQYLQ
EQGMLGTTPEDIAQFLHQEERLDSTQVGEFLGDNDKFNKEVMYAYVDQHDFSGKDFVSAL
RMFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTLFASADTAYVLAYSIIMLTTDLHSP
QVKNKMTKEQYIKMNRGINDSKDLPEEYLSAIYNEIAGKKISMKETKELTIPTKSSKQSV
ASEKQRRLLYNLEMEQMAKTAKALMEAVSHVQAPFTSATHLEHVRPMFKLAWTPFLAAFS
VGLQDCDDTEVASLCLEGIRCAIRIACIFNIQLERDAYVQALARFTLLTVSSGITEMKQK
NIDTIKTLITVAHTDGNYLGNSWHEILKCISQLELAQLIGTGVKPRYISGTVRGREGSFT
GTKDQAPDEFVGLGLVGGNVDWKQIASIQESIGETSSQSVVVAVDRIFTGSTRLDGNAIV
DFVRWLCAVSMDELLSATHPRMFSLQKIVEISYYNMGRIRLQWSRIWEVIGDHFNKVGCN
PNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMKRNRSPTIRDMVVRCIA
QMVNSQAANIRSGWKNIFSVFHLAASDQDESIVELAFQTTGHIVTIVFEKHFPATIDSFQ
DAVKCLSEFACNAAFPDTSMEAIRLIRHCAKYVSDRPQAFKEYTSDDMNVAPEDRVWVRG
WFPILFELSCIINRCKLDVRTRGLTVMFEIMKTYGHTYEKHWWQDLFRIVFRIFDNMKLP
EQQTEKAEWMTTTCNHALYAICDVFTQYLEVLSDVLLDDIFAQLYWCVQQDNEQLARSGT
NCLENVVILNGEKFTLEIWDKTCTCMLDIFKTTIPHALLTWRPVSGEFGSGSSSDAKEKL
DTISQKSVDIHDSIQPRSSDGRPYQPSAGSTVGEEMSKTRPTAKFPEQKLFAALLIKCVV
QLELIQTIDNIVFFPATSKKEDAENLAAAQRDAVDFDVHVDTQDQGMYRFLTSQQLFKLL
DCLLESHRFAKAFNSNNEQRTALWKAGFKGKSKPNLLKQETSSLACGLRILFRMYMDESR
TSAWEEVQQRLLNVCSEALSYFLTLTSESHREAWTNLLLLFLTKVLKISDERFKAHASFY
YPLLCEIMQFDLIPELRAVLRRFFLRIGVVFQISQPPEQESGISKQ
NT seq
5541 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaagggaagaagacgaaaaacatgttcctgacccgggccctggagaagatcctg
gccgacaaggaggtgaagaaggcgcatcactcccagctgcgcaaagcctgcgaggtggcc
ctagaggaaataaaggctgaaacagaaaagcaaagtccccctcatggagaagcaaagcct
ggttcaagcactcttccacctgtgaaatcaaagacaagcttcattgaagcggacaaatac
ttcctaccatttgaattggcatgccagtcgaaatgccccaggattgtcagtacatctcta
gattgtttacagaaacttatagcatatgggcacttgacagggaatgctccagacagtaca
gctccaggcaaaaaattaattgatagaattattgagacaatatgtggctgttttcaaggc
cctcaaacagacgaaggggttcagctacaaataataaaggctttgctcactgcagtaaca
tctcaacacatagaaatccacgaaggaacagtgctgcaggctgtaagaacatgttacaat
atctatctagcaagcaaaaatctcataaatcaaaccacagccaaggccactctaacacaa
atgctgaatgtcatttttgcacgtatggaaaatcaagcacttcaggaagccaaacagatg
gaaaaggaaagacacagacagcaacaccatctacagcagtcgccagtaagccatcatgag
cctgagtcacctcaattgagacatattccaacacagactgatcagctgtccaaagaacag
gagagagagcttgaccacagcacaaatgatgtggacaagaaccttcaagaagatatagag
gcagaaaatggatctgatatttctagtgctgaaaatgaacagacggaagctgaccaagcc
acagcagcagaaaatctttctaaagctgatggaggaacatatgatggtgaaagcaatgag
tgtgaagagaaggcacaagaaattgtagaaagtattgtgcaggaaatggtgaacatagta
gttggagatgtggaagggactgctgaaagtgcaggtggtgatggcacaattgtaacatta
gaggatggcagtgacagtgaaaacattcaggcaaatggaattccagggactccaatttct
gttgcttatacaccatctttacctgatgacagattatctgtctcttccaacgatactcag
gaatctggaaattcttcaggacctacccctggtgctaagttttcccacattttacaaaag
gatgccttccttgtattcaggtcactgtgtaaactctccatgaagcccctgtcagatgga
ccgccagatccaaaatctcatgaactgcgatcaaagattctttcattgcagttgcttctg
tccattctgcaaaatgcaggacctgtcttcaggacaaatgagatgtttattaatgctatt
aagcagtacctttgtgttgcactgtcaaaaaatggagtctcatcagttccagaagtcttt
gaactttcactttccatatttcttaccctcctctcaaactttaagactcacctaaagatg
cagatagaggttttcttcaaagaaattttcctgtatatcttggaaacttctactagctcg
tttgatcataaatggatggttatacaaacgctgacaaggatatgtgcagatgcccagagc
gtagtggacatctacgtgaactatgattgtgatttaaatgcagcaaatatatttgaaagg
ctggttaatgacctatcaaagattgctcaaggaaggggtagccaagaacttggcatgtcc
aatgttcaggaattaagtttgagaaaaaaaggattggaatgcttagtatcgatcttgaag
tgcatggtggagtggagtaaggatcaatatgtaaatcccaattctcagacaacacttggc
caagaaaaacccacagaacaggacagcaatgaaaccaaacaccctgagacaattaacaga
tatggaagcttaaattccttggattctactgcttcatcaggaattggcagttacagcaca
cagatgtctggcactgacaacccagagcagtttgaggtcctaaagcaacaaaaggaaata
atagaacaaggaattgacttattcaataagaaaccaaagagggggattcagtacctgcaa
gaacaaggaatgcttggcactacccctgaagatattgctcagttcttgcatcaagaggaa
agattagattcaactcaggttggggagttcctgggagacaatgataaatttaacaaagaa
gtcatgtatgcatatgtagaccaacacgacttttcaggaaaggattttgtttcagctctg
cgcatgtttctagagggatttcgtcttccaggagaggctcaaaaaattgatcgcctaatg
gagaaatttgctgctagatatttagaatgtaaccaagggcaaactctttttgctagtgca
gatactgcatatgttttagcttactcaattatcatgttgacaacagatcttcacagtcca
caggttaagaataaaatgacaaaagaacagtatattaaaatgaatagaggtatcaatgac
agtaaagatctccctgaagaatatttgtctgctatctataatgaaatagctggaaagaag
atttcaatgaaagaaacaaaagaattaacaatacccacaaaatccagtaaacaaagtgtt
gctagtgaaaaacagagaagactcctatataatttggaaatggaacaaatggctaaaaca
gctaaagctcttatggaggcagtgagccatgttcaggcaccttttactagtgcaacacac
ctggagcatgtgagacccatgtttaagttggcatggacaccttttctagctgcattcagt
gtgggtctacaggactgtgatgacacagaagttgcctctctttgtttggagggtatacga
tgtgcaatcaggattgcttgcattttcaacattcagcttgaaagagatgcctatgtccaa
gcgttagcaagatttacgttacttacagtgagttctggtattactgaaatgaagcagaag
aatattgacacaattaaaactctcatcacggtggctcatacagatggaaactatttagga
aattcctggcatgagattctgaaatgcattagtcaacttgaactggcacagttaatagga
actggagtaaaacctcgctacatctcagggacagtgcgtggcagggaaggttcttttact
ggaacaaaagatcaggcacccgatgaatttgtggggctgggactggttggtggaaacgtg
gattggaagcagatagcaagtattcaggaatccattggtgaaactagctcccaaagcgtt
gtcgttgctgtagacagaatatttacgggatctacaaggttggatggaaatgctattgtg
gatttcgttcgctggctttgtgctgtatctatggatgaactgctgtctgctacccaccct
cgaatgtttagtctgcagaagatagtagagatttcttactacaacatgggcaggataagg
ctacagtggtctagaatctgggaagttattggagatcattttaataaggttggctgcaat
cccaatgaagatgtagctatttttgcagtagactcattaaggcaattatcaatgaagttc
ttagaaaaaggagaacttgctaatttccgattccagaaggacttcctaagaccgtttgaa
catatcatgaagagaaacaggtctcctactattcgagacatggttgtacggtgtattgca
cagatggtaaattcccaggctgctaacattcgttctggctggaaaaacattttctcagta
tttcatctggcagcctcagatcaggatgaaagtatagtagaacttgcattccaaactaca
ggacacattgtcacaatcgtgtttgaaaaacacttcccagcaaccatagattctttccag
gatgcagtaaagtgcttgtctgaatttgcctgcaatgcagcatttccagataccagtatg
gaagcgatccgcctcattcgccactgtgcaaaatatgtatctgatagacctcaggcattc
aaggaatacacaagtgatgatatgaatgtagctcccgaagacagagtgtgggtgcgagga
tggttcccaattctgtttgagttgtcctgtatcatcaatagatgcaaattagatgtaaga
accaggggcttaacagtaatgtttgaaataatgaagacatacggccatacttacgaaaaa
cactggtggcaagatttgtttcggattgtcttcaggatatttgacaacatgaaactgcca
gaacaacagactgagaaagctgaatggatgacaactacttgcaaccatgcgctttatgca
atatgtgatgtattcacacagtacttagaagtacttagtgatgttcttttggatgatata
tttgcacagctgtactggtgtgtgcagcaagacaatgaacaactggcacggtctggtaca
aactgtttggagaatgttgtcatcctaaacggtgaaaagtttaccctagaaatctgggat
aaaacttgtacttgcatgctggatattttcaaaactacaatccctcatgcgctgctgact
tggcgacctgtcagtggggagtttggctctggatcttcctctgacgcaaaagaaaaactg
gatacaatctcacagaagtcagtagatattcatgattctattcagcctcgatcttcagat
ggacgtccatatcaacccagcgcggggtccacagtaggtgaagaaatgagtaaaaccagg
ccaacagcaaaatttccagaacagaagttatttgctgcacttttgatcaaatgcgttgta
caactggaactcattcagactatcgacaatattgtgttcttcccagcaaccagcaaaaaa
gaggatgcagagaacctagcagcagcacaaagagatgcagtagacttcgatgtccatgtg
gatacacaagatcaagggatgtatcgttttctaacatcacagcagcttttcaaacttctc
gattgtctgctggaatctcacagatttgctaaagcatttaattcaaacaatgaacaaaga
actgctctctggaaagcaggtttcaaaggcaaatcaaagcctaatcttctgaaacaggag
actagtagtcttgcctgtgggttgcgcattctgttccgtatgtacatggatgaaagccgt
accagcgcatgggaggaagtccagcaaagactactaaatgtctgcagtgaggctctgagt
tacttcctcactcttacatcagaaagtcatcgggaagcctggactaatctattactctta
tttttgactaaagtcctgaagataagtgatgaaaggttcaaggctcatgcctcattctac
tatcctctgttgtgtgaaattatgcagtttgaccttattcctgaacttcgagccgttcta
cgaaggtttttcctgcggattggtgtggttttccaaatatcccaaccaccagaacaagag
tctggaataagcaagcagtag
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integrated database retrieval system
