Calonectris borealis (Cory's shearwater): 142078744
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Entry
142078744 CDS
T11211
Symbol
CHD7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cbor03036
]
142078744 (CHD7)
Chromosome and associated proteins [BR:
cbor03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
142078744 (CHD7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_Hrp3
HDA2-3
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
142078744
NCBI-ProteinID:
XP_074997880
LinkDB
All DBs
Position
2:complement(41765368..41897647)
Genome browser
AA seq
3013 aa
AA seq
DB search
MADPGMMSLFGEDGNIFSEGLEGLGECGYPENTVNPMGQQMPMDQGFPSLQSSLHHPPAN
QNQAKLTHFDHYNQYEQQKMHLMDQPNRMISNAPGNGIASPHSQYHNPPVPQVPHGSGAG
GQMGVYPSMQNERHGQPFVDSGSMWGPRAVQVPDQIRAPYQQQQQQQPQPTQPPQAPSGP
PGQGHPQHMQQMGNYMARGDFSMQQHGQPQQQRMNQFSQGQEGLNQGNPFIATSGPGHLS
HVPQQNPSMAPSLRHSVQQFHHHPPTALHGESVAHSPRFSPNPPQQGAVRPQTLNFSSRS
QTVPSPTINNSGQYSRYPYSNLNQGLVNNTGMNQNLGLTNNTPMNQSVPRYPNAVGFPSN
SGQGLMHQQPIHPSGSLNQMNTQTMHPSQPQGTYASPPPMSPMKAMSNPAGTPPPQVRPG
SAGIPMEVGSYPNIPHPQPSHQPPGAMGIGQRNMGPRNMQQNRPFMGMSSTPREMGGHMR
PNGCPGVGLADPQAIQERLISGQQLPSQQQSFQQQMPTCPPMQPHPGIHHQSSPPPHPHH
QPWAQLHQSPQNTPQKVPVLQHSPSEPFLEKPVPDMTQVSGPNTQLVKSDDYLPSIEPQP
QQKKKKKKNNHIAAEGPSKGFGKEDFPGGLDSQNLSRNSVDCSQEEKKKKKKPKAKKEPK
DPKEPKEKKEPKTPKVPKTPKEPKEKKAKNTTPKPKTSKKASNKKPDSETSAAKKKVNKG
KEGSENSDLEKTPPPSPHPEDEDDPGVQKRRSSRQVKRKRYTEDLEFKISDEEADDADTA
GRDSPSNTSQSEQQESADAEGPVVEKIMSSRSVKKKMENGEEVEIEEFYVKYKNFSYLHC
QWASVEELDKDKRIQQKIKRFKAKQGQNKFLSEIDDELFNPDYVEVDRIMDFSRSTDDNG
EPVTHYLVKWCSLPYEDSTWELKQDIDQAKIEEFEKLMSREPETERVERPPADDWKKSES
SREYKNNNKLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIYLKGIHGP
FLVIAPLSTIPNWEREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRVVKGSYKFH
AIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQ
NTVEELFSLLHFLEPGRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNL
APKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLI
NGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRC
LDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAA
DTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAV
LQSMSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHTI
TIESEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRV
RKQTRLYSAVKEDELMEFSDLESDSEEKPSTKPRRPQDKSQGYARSECFRVEKNLLVYGW
GRWTDILSHGRYKRQLTEQDVETICRTILVYCLNHYKGDENIKSFIWDLITPTADGQTRA
LVNHSGLSAPVPRGRKGKKVKAQSSQPMLQDADWLTTCNPDVLFQEDSYRKHLKHHCNKV
LLRVRMLYYLRQEVIGDQADKILEGADSSEVDVWIPEPFHAEVPADWWDKEADKSLLIGV
FKHGYEKYNSMRADPALCFLERVGMPDAKAIAAEQRGTDMLADGGDGGEFDREDEDPEYK
PTRTPFKDEIDEFANSPPEDKEESIEIHSNKHSESNAELGQLYWPNTSTLTTRLRRLITA
YQRSYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIITEKRQKWTRREEADFYRVVS
TFGIIFDPVKHQFDWNQFRAFARLDKKSDESLEKYFNGFVNMCRRVCRMPVKPDDEPPDL
STMIEPITEERASRTLYRIELLRKIREQVLHHPQLGERLKLCQPSLDLPEWWECGKHDKD
LLVGAAKHGVSRTDYHILNDPELSFLEAHKNFAQNRGTGNANTVSSVNPLGAGCSQTPPI
VSSTPVQEEKTTEQTESKVEGSENPAAKEKSDIKEETDIADKDTKPDCDAEAEPGSVKCE
LKDVEMSTDVDPKSISEKGSEEDEEEKLDDDDKSEESSQPEAGAVSQGKNFDEESNASMS
TARDETRDGFYMEDGDPSVVQLLHERTFAFSFWPKDRVMINRLDNICEAVLKGKWPVNRR
QMFDFQGLIPGYTPTAVDSPLQKRSFAELSMVGQASVSGSEDITASPQLSKEDALNLSVP
RQRRRRRRKIEIEAERAAKRRNLMEMVAQLRESQVVSENGQEKVVDLSKASREATSSTSN
FSSVTSKFILPNVSTPVSDAFKTQMELLQAGLSRTPTRHLLNGSLIDGEPPMKRRRGRRK
NVEGLDLLFMSNKRTSLTVEDAEVTKAFEEDMEALPARNIPSPGQLDPDTRIPVINLEDG
TRLVGEDAPKNKDLVEWLKLHPTYTVDMPSYVPKSADVLFSPFQKPKQKRHRCRNPNKLD
INTLTGEERVPVVNKRNGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTDIVKQSGFVPE
SMFDRLLTGPVVREEGASRRGRRPKSEIAKAAAAAAAVASTSGINPLLMNSLFAGMDLTS
LQNLQNLQSLQLAGLMGFPPGLATAAAAGGDAKNPAAMLPLMLPGMAGLPNMFGLSGLLN
NPITATTGNATTASGQGETEDGASKAEEKKNENEEENKDSEKSTDTVSATDSANGSVSAA
TAATTATATTTTTTTNTGLPTNPLAFNPFLLSTMAPGLFYPSMFLPPGLGGLTLPGFPAL
AGLQNAVGSNEEKATDKTEGTAFKDEENLEGSDAEESLDKTADSSVLEDEIAQGEELDSL
DGGEEIENNENDE
NT seq
9042 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccaggaatgatgagtctgtttggagaagatgggaatattttcagtgaaggg
ttggaaggtcttggagaatgtggatatcctgaaaatacagtaaatcctatggggcagcaa
atgcccatggatcaaggatttccctctttacagtcatctcttcatcatccccctgcaaat
caaaatcaagccaagttgacccattttgatcactataatcaatacgaacagcagaaaatg
cacctgatggatcagccgaacaggatgataagcaatgcccctgggaatggtatagcgtct
cctcattcacagtatcacaaccctccagttcctcaggttcctcacggcagtggtgctggt
ggtcagatgggagtctatcccagcatgcagaacgaaagacacgggcaaccctttgtagac
agtggctccatgtggggaccacgggcagttcaagtgccagaccagataagggcaccatac
cagcagcaacagcagcagcaaccgcaaccgacacagccgccacaggcaccctccggacct
cctgggcagggccatcctcagcacatgcagcagatgggaaactacatggctcgtggtgat
ttttcgatgcagcagcacggtcagccgcaacagcagaggatgaaccagttttctcaaggc
caagaaggcctcaatcagggaaaccctttcattgccacctcaggacctggccacttgtct
catgtgccccagcagaatcccagtatggcaccttctttgcgacactcagtccagcaattt
caccaccatccccccactgctctccatggagaatcagtagcccacagtcccagattctcc
cctaatcctcctcagcagggtgctgttaggccgcaaacacttaattttagttctcggagc
cagacggtaccctcacctactataaacaactcagggcagtattctcgatatccttacagt
aaccttaatcagggattagttaataatacagggatgaatcagaatttaggccttacaaat
aacactccaatgaatcaatctgtaccaagatacccaaatgctgtcggatttccatcaaac
agtggtcaaggactaatgcaccagcaacccatccaccctagtggctcacttaaccaaatg
aacacgcaaactatgcacccttcacagcctcagggaacttatgcctctccacctcccatg
tcacctatgaaagcaatgagtaatccagcaggtacacctcctccacaggttagacctggt
agtgctggaataccaatggaagttggcagttatccaaatataccccatcctcagccgtca
caccagccccctggtgccatgggaattggacaaaggaatatgggcccccgaaacatgcaa
cagaatcgtccgtttatgggtatgtcttcaacaccacgggagatgggtgggcacatgaga
ccaaatggttgtccaggtgttggccttgcagatccacaagcaatacaagagcgactaata
tctggccagcagcttcctagtcaacagcagtcttttcaacagcaaatgccaacctgtcct
cccatgcagcctcatccagggatacatcatcagtcttcaccacccccacatcctcatcat
cagccttgggcacagcttcaccagtcaccacaaaatacaccacaaaaagtgcctgtcctt
cagcattctccgtcggaaccctttttagagaaaccagtgccggatatgactcaggttagt
ggaccgaatacccagctagtgaaaagcgatgattatctgccatcaattgagccgcagcca
cagcaaaagaaaaagaaaaagaaaaacaatcacattgctgcagaaggtcccagtaaaggt
tttggtaaggaagactttcctgggggacttgacagccagaatctaagcagaaactcagtg
gattgctcccaagaagagaagaagaaaaagaaaaagcccaaggcaaaaaaagaaccgaag
gatcctaaagaacccaaggaaaagaaggaacccaagacccccaaagtccctaagacccct
aaagagccaaaggaaaagaaagcaaaaaataccacgccaaaacccaagaccagcaaaaag
gctagtaacaagaaaccagattcagaaactagtgctgcaaagaaaaaggttaataaggga
aaggaaggttctgaaaactcagatttggaaaaaactccgccaccatcacctcatcctgaa
gatgaagatgacccaggggttcagaagcgacgctccagcaggcaggtgaagaggaagcgt
tatacagaagacctggagttcaagatttcagatgaggaggccgatgatgctgatactgct
ggaagagactctccttcaaatacttctcagtcagagcaacaggaatctgctgatgctgaa
ggtcctgttgtggagaaaatcatgagtagccgttcagtcaagaaaaagatggagaatgga
gaggaggtagaaatagaggaattctatgtaaagtacaaaaacttttcttaccttcattgt
cagtgggcatctgtggaagagctggacaaagacaagagaattcagcagaagattaagcgg
tttaaggcaaaacagggccagaacaaattcctttcagaaattgatgatgagctttttaat
ccagattatgtggaagttgatcgaatcatggatttttcacgtagcacagatgataatgga
gagcctgtaacgcattatctggtgaaatggtgttcacttccttatgaagacagcacttgg
gagctcaagcaagacatcgaccaagctaagatcgaagaatttgagaaactgatgtctagg
gagccagaaacagagcgtgtggagcgacctcctgccgatgactggaagaaatcggagagt
tccagggagtataaaaacaataacaaactcagggaataccagttggagggagtaaactgg
cttcttttcaattggtacaacacacgaaactgcattttagcagatgaaatggggttggga
aagactatccagtccattacgtttctctatgagatatatttgaaaggaatccatggtcct
ttcttggttattgcaccgttgtccacaattcccaactgggaaagagagttccgtacctgg
acagagctgaatgtggttgtgtatcatgggagtcaagcaagccggcggaccattcagttg
tatgaaatgtatttcaaagatccacagggtcgtgtggtaaaggggtcctacaagttccac
gccattatcacaacatttgaaatgatcttgactgactgcccagagctgcgtaacattcca
tggcgctgcgtggtcatcgatgaggcccacaggctgaaaaacaggaactgtaagcttttg
gaaggactcaagatgatggacctggaacataaagtgctgcttactggaacccctttgcaa
aatacagtagaagagctatttagcttgcttcacttcttggaaccaggtcgcttcccatca
gaaaccacattcatgcaagaatttggtgatctgaaaactgaagaacaggtgcaaaaactc
caagctattttgaagccgatgatgctgagacgtctcaaggaggatgtagaaaaaaacctg
gcccccaaagaggaaaccatcattgaagttgagctgacaaatattcagaagaaatactat
cgtgctattcttgaaaagaatttcacatttctttccaagggtggaggtcaggcaaatgta
cctaatcttttgaacactatgatggaactaagaaaatgctgcaatcatccgtaccttatt
aatggtgctgaagagaaaattttggaagagtttaaagaaacacacaatgccgactctcca
gattttcagctccaggcaatgatccaggctgctggcaagctagtactgattgacaagctg
ctgccaaaactgaaggctggtggccacagggtgcttatcttttcccagatggtgcgctgc
ttggacatactggaagactacctcattcaaagacggtacccatatgaacgaattgatggc
cgagtaagaggcaacttgcgtcaggcagctattgacaggttttcaagacctgattctgat
aggtttgttttcctgctgtgtacaagggcaggaggtttgggcattaatcttactgctgct
gatacctgcatcatttttgattcagactggaacccccaaaatgacctccaggctcaagca
cgatgtcacagaataggacagagcaaatcagtgaaaatttacaggttgataacaaggaat
tcttatgaaagggaaatgtttgacaaagctagcttgaagcttggccttgataaggctgtg
ctacaatctatgagcggaagagaaaacgctacaaatggggtgcaacagctttctaagaaa
gaaatagaagatcttcttcgaaagggggcatatggtgctttgatggatgaggaagatgaa
gggtctaagttttgtgaagaggatattgatcagattctcttaaggcgaacacacacaatt
actattgaatctgaaggaaaaggctcaacgtttgcaaaggctagttttgttgcgtctggg
aacaggacagacatttccttggatgaccctaatttttggcagaagtgggcaaagaaagct
gagctggatattgatgctttaaatggaaggaataacttagttattgatacaccaagagta
agaaagcaaaccagactctacagtgcagtgaaagaggatgaactgatggagttttcagac
ctggaaagtgattctgaagaaaagcctagcacaaagccccgtaggcctcaggacaaatcg
cagggttatgcaagaagtgaatgtttcagggtggagaagaacttgttggtttatggctgg
ggtcggtggactgacatcctctcacatgggcgctataaacgtcagctaacagaacaagat
gtggaaaccatctgccggactatcctggtatattgtcttaatcattacaaaggggatgaa
aatatcaaaagtttcatctgggatctgatcactccaaccgcagatgggcaaactcgagct
ttggttaatcattccggtctgtctgcaccagtgcccagagggaggaaaggcaagaaagta
aaagcccagagttcgcagccaatgctgcaagatgccgattggctcacaacctgtaatcca
gatgtattatttcaagaagacagctataggaaacatctcaaacatcactgtaataaggtc
ctgctgcgtgtccgcatgctctactatctacgacaagaagttataggggaccaagcagac
aagatcttagagggtgctgactcaagtgaagtagatgtatggatacctgagccattccat
gccgaagttcctgcagactggtgggataaggaggcggataaatcccttttaattggagta
ttcaaacacggttatgagaagtacaattctatgagagctgatccagcactgtgctttctg
gaacgggttggcatgcccgatgcgaaggccatagctgctgaacagagagggacagacatg
ttagcagatggcggtgatggcggtgaatttgacagagaggatgaagatccagaatataag
ccaaccagaactcctttcaaggatgaaattgatgaatttgcaaactcacctccagaagac
aaagaggagtccatagaaatacactcaaacaagcacagtgaaagcaatgctgagttaggc
caactctactggcccaacacttcaaccctgactacccgtctgcgtcgcctcattactgcc
tatcagcgcagctataaaaggcaacaaatgaggcaagaggcactaatgaagactgaccgc
aggagacgtcggcctcgggaagaagtgagggcactagaagcagaaagggaagctataata
actgaaaaacgacaaaaatggacaagaagagaagaagctgatttttatcgtgtggtgtct
acttttggaattatttttgatcctgtaaaacatcaatttgactggaatcaattcagagca
tttgccaggcttgataaaaagtccgacgaaagcttggaaaagtattttaatggctttgtg
aatatgtgtagaagagtgtgccgaatgccagtcaaacctgatgatgaaccacctgatctt
tccactatgattgagccgatcacagaagagcgtgcttctagaactttatatcgcatagaa
ctgttgcggaaaatccgtgaacaggttctccatcacccgcagttgggggagaggctaaag
ctttgccaaccaagcttggacctgccagagtggtgggagtgtggtaaacatgacaaagac
ttactggttggtgctgctaaacatggagtcagtaggacagattatcacattctgaatgat
cctgaactctcttttcttgaggctcacaaaaactttgctcaaaacagagggacaggtaat
gcaaatactgtctcttctgtaaaccctctgggtgctggctgcagtcaaacaccacctatc
gtctcatccacaccagtacaagaagaaaagactacagaacaaacggagtctaaagttgaa
gggtctgaaaatccagcagccaaagaaaagtctgatatcaaagaggagacagatattgca
gataaagacactaaaccggactgtgatgctgaggctgagcctggctctgttaaatgtgaa
ttgaaagacgtagaaatgagtacagacgtagacccaaaatctatttctgagaaaggttca
gaagaagacgaagaggagaaactggatgatgatgataaatcggaagaatcctcccaacct
gaagcaggagcagtttctcagggtaagaattttgatgaagaaagcaatgcctctatgagt
actgcaagggatgaaacacgcgatggattctacatggaagatggggatccctctgtggtt
cagctgcttcatgagagaacatttgccttctctttctggcctaaggaccgagtaatgatc
aaccgattagacaacatctgtgaagcagtgctgaaagggaagtggccagtaaataggcgc
cagatgtttgatttccaggggctcatacctgggtatactccaacagctgtggacagccct
ctacaaaaaaggagctttgcagagctctccatggttggtcaagccagcgtcagtggcagt
gaagatatcactgcttctcctcagttatcaaaggaagatgcactcaatttgtcggttcca
cgtcagaggaggaggagacgaagaaagattgaaattgaggctgagagagctgccaagagg
agaaatcttatggaaatggttgcccagttacgtgagtctcaggtggtctcagaaaatgga
caagaaaaggttgtagatttatcaaaggcctcacgagaggcaacaagttctacctcaaat
ttttcatctgttacttcaaagtttatcttgcctaatgtctccacacccgtgtctgatgcc
tttaaaactcaaatggagctgctgcaagcaggtctttcacgcacacccacaaggcatcta
ctaaatggctctttaatagatggagaaccgcccatgaagaggaggagaggaaggaggaaa
aatgtagaagggcttgatctgttatttatgagcaacaaacggacatcattgactgtagag
gatgcagaagtgaccaaagcttttgaagaagatatggaagccctaccagcaaggaacatt
ccatctcctggtcagctggacccagacactcgcatccctgtaatcaatctagaggatggg
accagattggtgggagaggatgctcctaaaaacaaggatttagttgaatggcttaaattg
catcctacttacactgtagatatgccaagttatgtaccaaagagtgcagatgtgctgttt
tccccatttcagaagccgaaacaaaaacgacacagatgtcgaaaccctaataaactggat
ataaacaccttgacaggagaagaaagggtacctgttgtaaataagcgaaatggaaagaag
atgggtggagctatggcccctccaatgaaggacttgccaagatggctggaagaaaatcct
gaatttgctgttgctccagattggactgacattgttaaacagtctggttttgttccagag
tccatgtttgaccgtcttctcactggacctgttgtgagggaggaaggagcaagcagaaga
ggaagaaggccaaaaagtgaaattgccaaagcagctgcagcagctgctgctgtagcatca
acttcgggaatcaacccactactaatgaacagtctgtttgctggaatggacctcacaagc
ctccagaacctacagaacctgcagtctctccagctcgcaggcctcatgggcttcccacca
gggctagcaacagctgctgctgctgggggggacgctaaaaatccggctgccatgttgcct
ctgatgttgccagggatggcaggattgcccaatatgtttggactaagcggattgttgaat
aacccgataacagctactactggaaatgccactactgcttccggtcaaggagagactgag
gatggcgcttcaaaagctgaagagaagaaaaatgaaaatgaagaggagaacaaagactct
gagaaaagcacagacactgtttctgctactgactctgcaaatggatctgtcagtgctgct
actgcggcgactaccgccactgccaccactaccaccaccaccaccaacactggattgccc
acaaaccctctggccttcaatcctttcctgctgtctaccatggctcctggcctcttctat
ccatctatgtttctacctccaggactgggaggattgactctgcccggtttcccagcacta
gcaggacttcagaacgcagtgggctccaacgaagagaaggctactgacaaaactgaagga
actgcctttaaagatgaagaaaatctggaaggcagtgatgcagaggagagccttgataaa
actgcagattcctccgttttagaagatgaaatagcacagggtgaagaattagactcactt
gatgggggggaagaaatagaaaacaatgaaaatgatgaataa
DBGET
integrated database retrieval system
