Calonectris borealis (Cory's shearwater): 142079032
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Entry
142079032 CDS
T11211
Symbol
DROSHA
Name
(RefSeq) ribonuclease 3 isoform X1
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
142079032 (DROSHA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbor03019
]
142079032 (DROSHA)
03009 Ribosome biogenesis [BR:
cbor03009
]
142079032 (DROSHA)
03036 Chromosome and associated proteins [BR:
cbor03036
]
142079032 (DROSHA)
Enzymes [BR:
cbor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
142079032 (DROSHA)
Messenger RNA biogenesis [BR:
cbor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
142079032 (DROSHA)
Ribosome biogenesis [BR:
cbor03009
]
Eukaryotic type
90S particles
RNase
142079032 (DROSHA)
Prokaryotic type
rRNA processing factors
142079032 (DROSHA)
Chromosome and associated proteins [BR:
cbor03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
142079032 (DROSHA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_MRPL44
Cro
5_3_exonuc
Motif
Other DBs
NCBI-GeneID:
142079032
NCBI-ProteinID:
XP_074998604
LinkDB
All DBs
Position
2:complement(91825034..91901333)
Genome browser
AA seq
1356 aa
AA seq
DB search
MSFHSGRGCPRGQGGPGARTSTQTYRPQNLRQLHPQQPSVQYQYDQQTAPPTTYSNPPTT
GYMPPRPDFVPYPPPVPPSTQNPISQCPMRPPFPNHQMRQSFPVPPCFPPAPPPVPNPSN
APVPGTPAGQGSFPYMMPPPAVPHPPPPPVIPQQVNYQPVYSAGYSQQSFPPPNFNSYQH
NSGSFQSSTTNSSGGSSHFRHTGQYQGEKSQSERRSPERSKHYDEHRHREHGHIHGDRHR
STNHGDRRDRGRSPDRRRQESSRHRTDYDRGRISPHHRSYERNSSGGSQYSCLMERATVL
TSFRERERERHRHRDSRRSPSPDRSYKKDYKRAGSRSPSRERKRPRWEEDRERWSENQSF
SKEKNYTAIKDKESEENASEKNEEEDEELLKPVWVRCTHSESYYSNDPMDQVGDSTVVGT
SKLRDLYEKFDEELGKRQAKAKAARPPWEPPKTKLDEDLESSSDSDCDSEDDSSCSSSSD
SEVFDVIAEIKRKKAHPDRLHEELWYNDPGQMNDGPLCKCSAKARRTGIRHGIYPGEEPI
KPCRPMTNNAGRLYHYRITVSPPTNFLTDRPTVIEYDDHEYIFEGFSMFAHAPLTNIPLC
KVIRFNIDYTIHFIEEMMPENFCVRGLELFSSYLFKDILELYDWNLKGPSLENDSICCPR
FHFMPRFVRFLPDGGKEVLSMHQILLYLLRCNKALVPEEEIANMLQWEELEWQKYAEECK
GMIVTSPGMKPSSVRIDQLDREQFNSDVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYV
KLRHLLANSPKVKQADKQKLSQREEALQKIRQKNTMRREVTVELSSQGFWKTGIRSDVCQ
HAMMLPVLTHHVRYHQCLMHLDKLIGYTFRDRCLLQLAMTHPSHHLNFGMNPDHARNSLS
NCGIRQPKYGDRKVHHMHMRKKGINTLINIMSRLGQDDPAPSRINHNERLEFLGDAVVEF
LTSVHLYYLFPTLEEGGLATYRTAIVQNQHLAMLAKKLELDRFMLYAHGPDLCRESDLRH
AMANCFEALIGAVYLEGSLEEAKQLFGRLLFNDKDLRDVWLNYPLHPLQLQESNTDRQLI
ETSPVLQKLTEFEDAIGVIFTHVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVA
TEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEFAITNDKTKRPVALRTKTLA
DLLESFIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKE
PDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQMA
HQKRFIERKYRQELKEMRWEREHQEREPDETEEARK
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccattccgggcgaggatgtccccgtggtcaggggggaccgggagcaagaact
tcaacacagacctatcgccctcaaaacctacggcagcttcacccacaacagccctccgta
caataccagtatgaccagcaaactgcccctccaacaacctattcaaaccctccaactacc
ggttacatgcctcccaggccagactttgtgccctatcctcctccagtgcccccttccaca
caaaatcccatcagccagtgtcccatgaggccgccatttccaaaccaccagatgaggcag
agcttcccagtgcctccgtgcttccctcccgctcctccgccagtgccaaatcctagcaat
gctcctgtgccaggaactcctgctgggcaaggcagctttccttacatgatgcctcctccc
gcagtaccgcatcctccccccccaccagtcataccgcagcaagtcaactaccagcctgtg
tactctgcagggtattcacagcaatcgttcccaccacctaacttcaacagctaccagcac
aactctggctcctttcagagcagcactaccaacagcagtggcggcagcagccattttcgg
cacacgggtcagtaccagggagagaagtcgcaaagtgaacgacgttctccagagaggagc
aagcactatgatgagcaccgacatcgtgaacacggtcacatccacggtgacaggcatcgg
tctactaaccatggggatcgtcgggatcgaggccggagtccagacaggaggaggcaagaa
agcagtcggcaccggacagattatgacagaggaaggatatcgcctcatcacagaagttac
gagcgtaacagctcgggaggtagccagtactcatgtctgatggaaagagctactgttttg
acatctttcagggagcgggagagggagaggcacaggcaccgtgacagcagaagatcacca
tccccagacagatcctacaaaaaagattacaagagagcaggaagccggtctccaagcaga
gagagaaagagaccccgatgggaggaggacagagaaaggtggtctgagaaccagagcttc
agcaaagagaaaaattacactgctatcaaagacaaagaatcagaggagaatgcatctgaa
aaaaacgaagaggaagatgaggaattacttaagccagtctgggttcgctgtacccattct
gaaagctattattccaatgaccctatggatcaagtgggggactctactgtggtaggaaca
agcaagctccgagatctgtatgagaagtttgacgaggagttaggaaagcgacaggcaaag
gccaaagcagccaggccaccatgggagccaccaaagaccaaactggatgaagatttagag
agctccagtgactcagactgtgactctgaagatgacagcagctgctctagcagttcagat
tccgaagtttttgacgtcattgcagaaattaagcgtaaaaaagcacaccctgatcgtctc
catgaagaactgtggtacaatgatccaggacagatgaatgatggacctttgtgcaaatgc
agtgctaaagcccgacgaacaggaataagacatggcatttatcctggcgaagagcccatt
aaaccatgtcgccccatgaccaacaatgctggaagactataccactatcgaattactgtg
tcgcctcccacaaatttcttaacagacagacctactgttattgagtatgatgaccatgaa
tatatctttgaagggttctcaatgtttgcacatgccccactaacaaacattcctctctgc
aaagtaatcagatttaacattgactatacaattcatttcattgaggagatgatgcctgag
aatttttgtgtgagaggtcttgagctgttctcttcatatctgtttaaagatattttggag
ctctatgactggaatcttaaaggtccttcacttgaaaatgattctatttgctgccccaga
tttcacttcatgccgcgatttgtgagatttcttccagatggaggaaaagaagtactctca
atgcatcagattctcctctacttgttacgatgcaataaagctctggtgcctgaagaggag
attgccaacatgcttcagtgggaagaactggaatggcagaaatatgcagaggaatgcaaa
gggatgatcgttaccagccctggcatgaaacccagctcagttcgtattgatcaactggac
cgtgaacagttcaattctgatgtaattactttccccattattgtccacttcgggatacga
cctgctcaactcagttatgctggagatcctcagtaccaaaagctgtggaagagttatgtg
aagctgcgtcacctgctggctaatagtcccaaagtcaaacaggctgataaacagaaatta
tcacaaagagaggaagcactgcagaaaattcgtcagaagaacacaatgagacgtgaagtg
accgtcgagttgagtagccagggattctggaaaacagggatacgctctgacgtctgccag
catgcaatgatgcttcctgtcctcacccaccatgtccgctaccatcagtgtctgatgcat
ttggacaaattgataggctacacttttcgagataggtgcttgctgcagcttgccatgact
catccaagccatcacttaaactttggaatgaatccggatcatgccagaaattccttgtcc
aactgtgggattcgacagccaaagtatggagatagaaaagttcaccatatgcacatgaga
aaaaaagggataaacaccctgataaatattatgtcccgtttgggacaggatgatccagct
ccttccaggattaaccacaacgagcgtttagaatttctgggagatgctgtggtggagttc
ttaacgagtgtccacttgtactacctgtttcccactctggaggaaggaggattagctaca
taccgcactgccatcgtacagaaccaacacctggccatgttggctaagaagctggaacta
gatcgatttatgctttatgctcacggtccagacctttgcagggaatcagatctccgccat
gccatggccaactgctttgaagccctaataggagctgtttatctagaagggagcctagaa
gaagcaaaacaattatttgggcgtttactcttcaatgacaaggacctgcgggatgtatgg
cttaattatccactacacccactccaactgcaggagtccaatactgacaggcaactcatc
gagacctctccagttcttcagaagcttacagagtttgaggacgcgattggagtcatcttt
actcatgttcggcttttagcacgtgcattcactctgaggacagtaggctttaaccatctg
actctaggccacaaccagaggatggaattcctgggtgactccataatgcagttggtagcc
acagagtatttattcatacatttccccgatcatcatgaagggcacttaacgctgttgaga
agttctttggtgaacaacaggacacaggccaaggtggcagaagagctgggtatgcaagaa
tttgccatcactaatgacaagacaaaaagacctgtagctcttcgaactaagactttggct
gatctcttggaatcctttattgctgccctgtacattgataaagatttggaatacgttcac
actttcatgaatgtatgcttttttccacggctaaaggagtttattttaaatcaagactgg
aatgatcctaaatctcagcttcaacagtgctgcttgactctcaggacagaaggaaaagag
ccagacattcccctttacaagactttgcagacagtgggaccgtctcatgccaggacatac
acagtagctgtttacttcaaaggggaacgaataggatgtggaaaaggtccaagtattcag
caagcagaaatgggagctgcaatggacgcacttgaaaaatataactttccccagatggcc
catcagaaacggttcattgaacggaagtacagacaagagttgaaagaaatgaggtgggaa
agagagcatcaagagagagaaccagatgagactgaagaagcaaggaaataa
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integrated database retrieval system
