Calonectris borealis (Cory's shearwater): 142079113
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Entry
142079113 CDS
T11211
Symbol
NUP153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor03013
Nucleocytoplasmic transport
cbor03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142079113 (NUP153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
142079113 (NUP153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbor03019
]
142079113 (NUP153)
Messenger RNA biogenesis [BR:
cbor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
142079113 (NUP153)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
142079113
NCBI-ProteinID:
XP_074998810
LinkDB
All DBs
Position
2:99612226..99660498
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AA seq
1459 aa
AA seq
DB search
MASGGGGGGGGGGKIRTRRYHLGVAKPPYARSKQSPGEFSQGIISRVTESVKNIVPGWLQ
KYFNKSEDECVDTNESTNQEENPVNYHHDYANEDTIMIDGRVTPESARISLEEPSTSRSA
LNFSDVLTRPSLHRSHLNCTMLDSTVPHCQPSTSSSFGFGSPGLSLVKEIKDSTSQHDDD
NISTTSGFSSRASDKDITVSKNTSAPLLWSAEAERSHSLSQHPAASSKKPAFNLSAFGSP
SPSLGNTSVFKTSQLGDSPFYPGKTSYGGAAAAASETKARIAPYQPPVRRQMKAKQAGAQ
SYGVTSSTARRILQSLEKMSSPLADAKRIPSSVSSPLSSPVDRSVLNITSFQSKRKQMQS
QHPPVQKLVTPKAISLSVGRSQYFKPSLTPTTDSSKIHQRGETTHEDVREKSFPAEQGVR
PSESNLTYPKFGTPASNGLSSVEGVGPGGKMRRERGVHYVSKPGQNQQGVEEPVLPKVPL
PISTASLPSFNFSFLASSTVSSSPSTVSTAVMNKVQPASNVGSPVFRFSSPVVKSTEVEM
LPPLSQIGFTFSVPVVKSAEVSGSSDTPVTSLLTLDTASVNSTSNKKEEEEEEEYDGPSK
PAKVLKGGSVLDILKSPGFTSVKTHSSASAQPVTSTVVYTRPAISSFSAGKDTSKQASSF
WQSDTYDPCLQNKTTDGKCVTCQAAKVSTVESTKQTISSSQCGASKAAVPTAGTLGFEDK
FKTAPNTWDCDTCLVQNKPEATKCIACETPKPGTGVMPALTLPVVTDNSVTVTSSSSSTD
TTVTLGFGDKFKKPKGSWECAVCLVSNKAEDSKCVACQSEKPVPVTSSSVSAFSASSGGF
LDLDKFKKPEGSWDCEVCSVQNKAEATKCVACESAKPGTKAELKGFGTATVSTNAAMPSF
TFGVQSSSSESSHTLGSTGNFKFGEQESFKFGIASESASSNTVTGAFKFPSSGDFKFGVS
SSDSKSEDSKKEGKSNSFTFGLPSTSSQASSTFQFGTASLGQQEKKEEPVLASFGFGTSS
ASSIATSENKTGVSSFTFGTVAAKEVASPALAFKKSDGKKDETLSTKGGFSFGSVEPAPA
SQFVLGRTEEKQDSVTSAAPSAFGKKADNEELKAQPIFSAGTAEHTKEESTAKPIFNFSF
VKPSEKETEQAKPTFAFGPQTSNSDQGAAKPSFGSLSSGSSRTVVPTTSANSSTVFGSAI
SSSNPQPVPAPFVFGQPSNTVSSSVFGNSAESAASQSFGFSQENKPATTSSSTGSALVSF
LFGSAASSTNAANSGFTFGATTTSSSTGSSSSFLFSSGTPAPAAGPAFGASQPPAFGQSQ
GSSQPSAPSFGSLSTTLFSTGTQPAPPAFGSVTSSTQPSVFGQQATQQPGFGSGTPSAGS
VFQFGSNTSNFNFPNNPGVFTFGANPSAPAAPAQASGSSGFSFSQPPAFTMGTNGKNVFS
ASGSSVSGRKIKTAVRRRK
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggcggcggcggcggcggcggcggcggcggcaagatccggacccggcggtac
cacctgggcgtcgcgaagcctccctatgcgcgcagcaagcagtctcctggggagttcagt
cagggaatcattagcagagtgacagaatcggtgaaaaacattgtaccaggatggttacag
aagtatttcaataaaagtgaagatgaatgtgtagatacaaatgaatctacaaatcaggaa
gagaatccagtaaactatcatcatgattatgcaaatgaagataccataatgattgatggg
agagtcacgcctgaatcagcaagaattagtttagaagaaccatccacgagtagatctgca
ttgaacttctcggatgtgttaacaaggccctctcttcatcggagccatttgaactgtacc
atgttggattccacagtaccacattgtcagccctctacatcttcttcatttggctttggc
agtcctggactgtctcttgtaaaagaaataaaagattctacctctcagcatgatgatgat
aacatctcaacaaccagtggcttctcctctagagcatctgataaagatatcacagtttca
aaaaatacttcagcaccactgctgtggtccgcagaggctgaaagatctcattccctctca
cagcatcctgcagctagctctaaaaaacctgcattcaatttgtctgcttttggatctccc
tctccttcacttggaaacacttctgtctttaagacaagccagcttggggattctccattt
tacccgggaaagaccagttatggtggtgcagctgcagcagcaagcgagacaaaagcgcga
attgctccttatcagccaccagtaagaagacaaatgaaagctaaacaagcaggtgcgcaa
tcctatggtgtgacaagttccacagcgcggcgcatcttgcagtcattggagaagatgtca
agtcctttggcggatgctaaaaggattccatcttctgtttctagtccactgtcttctcct
gtggacaggagtgtgctgaatattaccagcttccaatccaaacgaaaacagatgcaatcg
cagcatccacctgtccagaaactcgtgacaccaaaggcaatctctctgtcagtgggtcgg
tcccagtattttaaaccatctctgactccaactactgattccagcaaaattcaccagagg
ggagaaacaacgcacgaagacgtgagagagaagagttttcctgcagaacagggagtaaga
ccatctgaaagcaatttgacctaccccaaattcggtactcctgcatccaatggtctgtct
tcagtagaaggagtgggtcctggcggcaagatgagaagggaaagaggagtacactatgta
tcaaaacctggacaaaaccaacagggtgtggaggaaccagtactaccgaaagtaccccta
cccatcagtactgcatcgctgccttcattcaactttagttttcttgccagtagtactgtc
tcatcgtcaccaagcactgtttcaacagcagtgatgaacaaggtccaaccagcaagtaat
gttggcagtcctgtgttcagattttcatctccagttgtgaaatctactgaggtggaaatg
ctacctccgttgtctcagattgggtttacatttagtgttcctgttgtaaaatcagcagag
gtttctggatccagtgatacaccagtgacgtccttacttactctagatactgccagtgta
aacagcaccagcaataagaaggaagaagaagaagaagaagaatacgatggcccctccaaa
cctgcgaaggtcttaaagggaggaagtgtgttagacattctaaaaagccctggctttacg
tctgtgaaaacacactcctctgcatctgcacagcctgttacaagcacagtggtctataca
aggcctgcaataagtagtttttctgcaggtaaagacacctctaaacaagcatcctcattt
tggcagtctgacacatatgacccatgtctgcaaaacaaaaccacagatggcaaatgtgta
acatgtcaagctgctaaagtgtcaacagttgagagtactaaacagacgataagctcaagt
caatgtggcgcctctaaggcagcagtccctacagcagggacgttgggctttgaagacaaa
tttaaaacagcacccaacacatgggattgtgatacctgtctggtccagaacaagcctgaa
gctacaaaatgtatagcatgtgagacaccaaagcctggaacaggagtaatgcctgctctg
acattgccagtggtcacagacaactcggtaacagtgacatcctcctccagcagcactgac
acaacagtcactctggggtttggagacaaatttaagaagccaaaaggctcttgggagtgt
gcggtgtgccttgtatcgaataaggcagaagacagcaaatgtgtagcttgtcagtccgag
aaaccagtgcctgtgaccagcagcagtgtttctgcattttctgcttcttctggaggattt
ctggatttagacaaattcaagaagcccgaaggaagctgggattgtgaggtctgctcagtc
caaaacaaagcagaagccacaaaatgcgtagcctgtgaaagtgcaaagccaggcaccaaa
gcagaactcaaaggttttggtactgctactgtgtccacaaatgctgcaatgccatcattt
acatttggtgtccagtcgtcgtcctctgaatcttctcatacattaggtagcacaggaaat
tttaaatttggagaacaagagagcttcaagttcggcattgcatctgaatctgcatcctcc
aacactgtgactggggcgtttaagtttcctagttcaggggacttcaaatttggagtttct
tcctcagactctaaatcagaagacagtaaaaaagaaggtaaaagtaacagttttaccttt
ggacttccatctacaagcagtcaggcttcttcaacatttcagtttgggacagcgagcctg
ggacagcaggaaaagaaagaggaaccagttttggcaagctttggttttggcacgagttct
gcttcttccatagctaccagtgagaataaaaccggagtcagcagcttcacttttggaact
gtggcagcaaaggaggtagcatcacctgctcttgcatttaagaagtcggatgggaaaaag
gatgaaactctttcaacaaagggaggcttctcttttggcagtgtggagcctgcacctgcc
tcacagtttgttttgggaaggacagaagagaaacaggactctgtcacttctgctgctcca
tcagcatttggaaagaaagctgacaatgaagagttaaaggcacaacctatcttttcagct
gggacggctgagcataccaaagaggagagcacagcaaaacctatattcaattttagcttt
gttaaaccatcggagaaggaaactgagcaggcaaagccaacttttgcatttgggccacaa
accagtaattcagatcaaggagcagcaaagccatccttcggctccttgagctcaggttcc
tcccgcacagtcgtacccaccacttcagccaacagcagcactgtgtttggcagcgccatc
tcttcctcaaatcctcagccagttcctgctccctttgtgtttggacaacccagcaacact
gtgagcagctccgtttttggcaattctgcagaatctgcagcatctcagtcatttggcttc
tctcaagaaaacaaaccagcaaccacatcttccagcaccggctcagctcttgtgtcattt
ctctttggttcggcagccagcagtaccaatgcagcaaattcaggctttacctttggagcc
acaaccacatcaagttcaacagggtcatcctcttcattcctgtttagctctgggacccca
gcgcctgctgccggcccagcatttggcgccagtcagccaccagcatttggccagagccaa
gggtccagccagccaagcgctccaagttttggatcgctgtcgacaacgttgttttccact
ggcactcagcctgctcctcctgccttcggctcagtgacgagcagtactcagccctctgtg
ttcggacagcaagcgactcaacagccaggttttggctctggtacccccagcgctggttct
gtattccagtttgggagtaacacttctaatttcaactttccaaataaccccggagtattt
acttttggtgcaaatccttctgcaccagccgcaccggcacaggcttctggctcttccgga
ttttcgttcagccagcctccagcatttacaatggggactaatgggaaaaatgttttctct
gcctctggatcttcggtttctggtcggaagataaagactgcagttagacgtagaaaataa
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