Calonectris borealis (Cory's shearwater): 142079152
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Entry
142079152 CDS
T11211
Symbol
NFATC1
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 1 isoform X1
KO
K04446
nuclear factor of activated T-cells, cytoplasmic 1
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04010
MAPK signaling pathway
cbor04020
Calcium signaling pathway
cbor04148
Efferocytosis
cbor04218
Cellular senescence
cbor04310
Wnt signaling pathway
cbor04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
142079152 (NFATC1)
04310 Wnt signaling pathway
142079152 (NFATC1)
04020 Calcium signaling pathway
142079152 (NFATC1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
142079152 (NFATC1)
09143 Cell growth and death
04218 Cellular senescence
142079152 (NFATC1)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
142079152 (NFATC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbor03000
]
142079152 (NFATC1)
Transcription factors [BR:
cbor03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
142079152 (NFATC1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
Motif
Other DBs
NCBI-GeneID:
142079152
NCBI-ProteinID:
XP_074998948
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Position
2:105279976..105392300
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AA seq
927 aa
AA seq
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MTGVEAEQEFDFDFLFEFKHSDEGGGGEHYNYTSSNVNAGLPLNVAHSSLSTPCHGLQTS
NPVISVVPSTNHPSGYGGHIDSGASEYYLPPNIRPNGAPALESPRIEITSYMGLHHNNNQ
FFHDEVEEAIPNTKRSPSTATLNLPNIEAYRDPSCLSPASSLSSRSCNSEASSYESNYSY
PYTSPQTSPWQSPCVSPKTTDTEEGYQRSMVACTLLNSPRHSPSTSPRTSITEENWLGAR
NSRPPSPCNKRKYNLNGRQTSYSPHHSPTPSPQNSPRVSVTDETWLGNTNQYTSSAIVAA
INALTTDSTIDMNDGIPIKSRKTAIDHTPSMTLKTEPAGEDHGTISPTADLSPEDFSSFQ
HIRKGNFCEQYLSVPQHPYQWAKPKSLSPTSYMSPSLPALDWQLPSHSGPYELRIEVQPK
SHHRAHYETEGSRGAVKASAGGHPIVQLHGYLESEPLTLQLFIGTADDRLLRPHAFYQVH
RITGKTVSTTSHETILSNTKVLEIPLLPENNMRAIIDCAGILKLRNSDIELRKGETDIGR
KNTRVRLVFRVHIPQANGRTLSLQVASNPIECSQRSAQELPLVEKQSTDSFPVIGGKKMI
LTGHNFLQDSKVIFVEKAPDGHHVWEMEAKTDKEMCKPNSLVVEIPPFRNQRITSPVQVN
FYVCNGKRKRSQYQLFTYLPANVPIIKTEPTDDYEPAQTCGPMNQGLSPLSKPYYSQQIM
MPPDPGSCLVAGFASCQQRNAVMSPSPNASPKLHDLSSSPYKCIPNPGHSHLGLQQPAGG
VPTIQEVPRSIVVHPSSPEQSSHIMLQPQVSQHLSSSCPLGYQQTLYPNSPSSPVPSVTQ
EPTYLQSCSPTHSSIMGQQQQQLPKVHRNESPTTQPLSLPELHEESNHNLAPIPVTIKRE
PEELDQMYLDDVNEIIRNDLSSTNVHS
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgacgggcgtggaggccgagcaggagtttgacttcgatttcctcttcgagttcaagcac
agcgacgagggcggcggcggagaacactataattatacatcctcaaacgtaaatgctggc
ttgcctctaaatgtggcacattcctcattgtcaactccatgtcatggccttcagacatca
aatcccgtcatttcagttgtcccatcaacaaaccatccctctggatacggaggacacatt
gacagcggggcctccgagtattacctgccgccaaacatcaggcctaatggagctccggcg
ctggagagccctagaattgagatcacttcttacatgggacttcatcataacaacaaccag
tttttccacgatgaggttgaggaggccatcccaaacaccaagcggtcgccttccactgcc
actttgaacttaccgaacattgaggcgtacagagacccgtcctgcctgagtccagcaagt
agcttgtcttccaggagctgcaactccgaagcgtcttcctacgagtccaactactcgtat
ccgtacacttcaccccagacctctccgtggcagtccccatgcgtctctccgaagaccacc
gacacggaggaaggctaccaacgcagcatggtggcctgcactttgctcaactctccgagg
cactctccgtcgacgtctcccaggacgagcatcacagaggagaactggctgggggctcgc
aactccaggcctccgtctccctgtaacaagagaaagtacaacctcaacggccggcagacc
tcctactccccgcaccactcccccacgccttctccgcaaaactcgccgcgggtgagtgtc
acagatgagacgtggctgggcaacaccaaccagtacaccagctccgccatcgtcgccgcc
atcaacgccctcaccaccgacagcaccatagatatgaacgacgggattcccatcaagtca
aggaagaccgccatcgaccacaccccgtccatgactctcaaaactgaaccggctggcgag
gatcacgggaccatatcgccaactgccgatttgtcaccggaagacttctccagctttcag
cacatcaggaaaggaaacttctgcgagcagtacctgtccgtgccacagcatccctaccag
tgggccaaaccaaagtctctgtctccaacatcctacatgagcccatccctgcctgccctt
gattggcagctgccatctcactcaggaccttatgaactgcgtattgaagtgcagccgaaa
tcccaccaccgagctcattacgagacggaaggcagtcgaggggctgtgaaggcatctgca
gggggccaccctattgtgcagctacatggttacttagaaagcgagccgctcacgctacag
ctgttcattgggactgcagacgaccgcctgctgcgaccccatgctttctaccaggttcat
cgaatcaccgggaagaccgtttccaccaccagccatgaaacaatactttccaacaccaaa
gtcctggaaattccacttcttccagagaacaacatgagagcaatcattgactgtgctggg
atattaaagctccgaaactctgacattgagctgcgcaagggagagacggacatcggtcgg
aagaacacgcgcgtgcggctggtcttcagggttcatatcccgcaggccaacggcaggacc
ctctccttgcaagtagcctccaaccccatcgagtgctctcagagatctgcccaagaactg
cctctggtggagaagcaaagcactgacagctttcctgttattggagggaaaaaaatgata
ttgactggccataactttctgcaagactccaaagtcatctttgtggagaaagcaccagat
ggtcaccatgtgtgggaaatggaagccaaaaccgacaaagaaatgtgcaagccaaattcg
ttggtggttgagataccacctttccgcaatcagagaattaccagccctgtgcaggtcaac
ttctatgtttgcaacggaaagagaaagagaagccagtaccagcttttcacctatcttcct
gctaatgttccaattataaaaacagaacccacagatgactatgagcctgctcaaacctgt
ggaccaatgaaccaaggcttaagccctctctctaaaccatactacagccagcagatcatg
atgccccctgatcctggttcgtgcctcgtggctggctttgcctcctgtcagcagagaaac
gctgtgatgtcaccctctcccaacgcaagccccaagctgcacgacctttcgtcctctcct
tacaagtgcatccccaacccgggccacagtcacctcggacttcagcagcccgctggaggt
gttcccaccatacaggaagtgccaaggtctatagttgtgcacccaagctcccccgagcaa
tcatctcacatcatgctgcagccgcaggtgagtcaacatctgagcagtagctgtcccctt
ggttatcaacaaacactctatcccaacagtccctcttctccagttccatctgttacccaa
gagccaacctatttgcagtcctgcagtccaactcactcatccataatgggtcaacagcag
cagcaactgccgaaggttcacagaaatgagtctccaacaacccaaccactgtcattgcca
gagttgcatgaggaaagtaatcataatttggcccctattcctgtaacgatcaagcgagaa
cctgaggaattggaccagatgtacctggatgatgtaaatgaaattataaggaatgacctt
tccagtaccaatgtccattcatag
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