Calonectris borealis (Cory's shearwater): 142079154
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Entry
142079154 CDS
T11211
Symbol
CTDP1
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase isoform X1
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cbor01009
]
142079154 (CTDP1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbor03021
]
142079154 (CTDP1)
Enzymes [BR:
cbor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
142079154 (CTDP1)
Protein phosphatases and associated proteins [BR:
cbor01009
]
HAD phosphatases
Fcp/Scp phosphatases
142079154 (CTDP1)
Transcription machinery [BR:
cbor03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
142079154 (CTDP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCP1_C
BSH_Fcp1
NIF
PTCB-BRCT
BRCT
RTT107_BRCT_5
LIG3_BRCT
BSH_CusB
Motif
Other DBs
NCBI-GeneID:
142079154
NCBI-ProteinID:
XP_074998951
LinkDB
All DBs
Position
2:105487708..105605443
Genome browser
AA seq
1000 aa
AA seq
DB search
MEGPAERGGGPGAEGPAGVITEIRAPGPRPLRLLEWKVSVGAAVQIGSVLALCAPLPPAP
RPAAGPAAPPPAASGASTRPQRAGPERKLKAERPGVVRELCARPGQVIAPGGVLVRLEGC
SHPVVMKGLCAECGQDLTQIRSKHGKQNVPLSTATVSMVHSVPELKVSSEQAEQLGREDQ
QRLHRNRKLVLMVDLDQTLIHTTEQHCQQMSNKGIFHFQLGRGEPMLHTRLRPHCKEFLE
KIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRDLFPCG
DSMVCIIDDREDVWKFAPNLITVKKYVYFQGIGDINAPPGSREIQMKKKVNHSTKPEALD
SAVTSAKDAEEIKNVTCVEEQSNGLKKATKDTCTANGSTSVSSETSDWDMNSRDKVNAQD
SLNDSTDHKMDSEVTNDLTNTKESQSFSEQVDRTMIEKQQTQDKTTNDLDFELSSDSESD
GGLDTRKSSTSVSDSENEEKRSWKKSKQPLQDENLQKGSCSDVSEKKDGLVNHSGDTQSL
PSENIHDKTDLEAQEESEQESLCDLGNGCADKKEAETESQNSEQSGITMGESLDQSMEEE
EEEDDTDDDDHLIYLEEILVRVHTDYYTKYDKYLKKEIEEIPDIRKIVPELKSKVLADVT
IIFSGLYPTNFPIEKTREHYHATALGAKIVKNLVLSADDPDKATHLIAARTGTEKVRQAQ
DCKDLHVVNPDWLWSCLERWDKVEEQLFPLKDDYIKTHRENSPATFPDTHSTFQTALFHP
TPIHPRSQPGPEVRLYDPNTGKLIRKGTQTSGQSMYIQSPAPPITLPVHGEHSSFRVVQP
HQQQMFEEEDLPASENEEQPGPSKRKRQPSMSETMPLYTLCKEDLESMDKEVDDILGEGS
DESDSEKKKPEEEGEKPQISATETLGMKTDQRPGSSSSSSSSSSERSLTGSVPRGHKRKL
DEDDAASESSKESSNEDEEGSSSEADEMAAALEAELNDFM
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atggaggggccggcggagaggggcggcgggcccggcgcggagggcccggcgggggtgatc
acggagatccgggcgccgggcccgcggccgctgcggctgctggagtggaaggtgtcggtg
ggggcggcggtgcagattggatcggtgctggcgctgtgcgccccgctgccgcccgccccg
cgccccgccgccggccccgccgccccgccgcccgccgccagcggcgccagcacccggccg
cagcgggccggccccgagcgcaagctgaaagcggagcggcccggcgtggtgcgggagctg
tgtgcgcggcccggccaggtcatcgcgcccgggggtgtcttggtgagactggaaggatgc
agccatcctgttgttatgaaaggcttgtgtgcagaatgtggccaggacttgactcagata
cgaagcaagcatggaaagcagaatgtgccattatccacagcaactgtgtctatggttcac
agtgtcccagaactgaaagttagctctgagcaagctgagcaactaggacgagaagatcaa
cagcgactgcatcgaaatcgaaaactggtgctcatggtagatttggaccagacattgatc
catactacagaacagcactgccaacaaatgtctaataagggaatatttcatttccagtta
ggtcgaggtgagcctatgttgcatactcgtttgcgtcctcactgtaaggaattcctggaa
aaaattgccaagctgtatgaattacatgttttcacttttggcagcagactgtatgcacat
acaattgcaggatttttggaccctgaaaagaagcttttttcccatcggatattgtcaagg
gatgaatgtatcgatccattttctaaaactgggaatcttagagatctcttcccatgtggg
gattccatggtttgcatcattgatgatagagaggatgtttggaagtttgcacccaatttg
ataactgtgaagaaatatgtgtactttcaggggataggagatattaatgcacctcctgga
tcaagagaaattcaaatgaagaagaaagtaaaccactctacaaaaccagaggctctggat
tcagcagtgacatcagcaaaagatgctgaagaaataaagaatgttacatgtgtggaagaa
caaagcaatggtctcaagaaagctacaaaggacacttgcacagcaaatggaagtacttct
gtaagcagtgaaacatctgactgggatatgaactctcgagataaagttaatgcccaggac
tccttaaatgatagcactgatcacaaaatggacagtgaggtcactaatgatttgacaaac
acaaaagaatctcagagtttttcagaacaagttgatagaacaatgatagagaagcagcaa
acccaagacaagacaacaaatgacttggactttgaactgtctagtgacagtgaaagtgat
ggtggattggataccagaaagtcatccacttctgtatcagatagtgagaacgaagaaaag
agaagctggaagaaatccaaacaacctctgcaggatgaaaatttgcagaaagggagttgc
tctgatgtgagtgagaaaaaggatggtctggtgaaccattctggggacacacaatctcta
cctagtgaaaatattcatgacaagactgatcttgaagcacaagaagaaagtgaacaggaa
agcctttgtgatttaggaaatgggtgtgcagacaagaaggaagctgaaacagaatctcag
aatagtgaacagtctggaattactatgggtgagtccttagaccagagtatggaggaagaa
gaggaagaggatgatacagatgatgacgaccatttaatatacctcgaagagatccttgtg
cgggttcacactgattactacacaaagtatgataaatacctgaaaaaagagattgaggaa
attccggacatcagaaaaatagtaccagaactgaaaagtaaagtgttggcagatgtaacc
ataatatttagcggactctacccaacaaacttccccattgagaaaacacgggaacactat
cacgccacagcacttggagctaaaattgtgaagaatctagtactgagtgctgatgatcct
gacaaagcaacgcatctcattgcagcaaggacaggcacagaaaaagtacggcaagctcag
gactgcaaggatctccatgttgtaaaccccgattggctgtggagctgcctggagcgctgg
gacaaggttgaggaacagctctttcccttgaaggatgactacatcaaaacacacagagag
aacagccctgccacgtttcctgatacacacagcacttttcagacagcgctgtttcaccca
acacccatccatccaaggtctcaacctggtcctgaagttcgactttatgatcctaacact
ggaaagctaatcaggaaaggcactcagacctctggccagtcgatgtacatccaatctcca
gctcctcccatcaccttaccagtccacggtgaacactcgtccttcagagttgttcaacca
catcagcagcagatgtttgaagaagaagacctaccagcgagtgaaaatgaagagcagcct
ggtccatctaagcggaaacgccagccaagtatgtctgagacaatgcccctgtacacccta
tgtaaagaggatttagagagtatggataaagaggtggatgacatcttaggagaaggcagt
gatgaaagtgatagtgaaaaaaaaaagccagaagaggaaggtgaaaaacctcagattagt
gcaacagagactttaggaatgaaaacagatcagagacctggatcatcatcgtcgtcatca
tcatcgtcaagtgaaagaagcttaacaggcagtgtacccaggggtcacaagcgcaaactg
gatgaagatgatgctgccagtgaatccagtaaagaatctagcaatgaagatgaggaagga
agcagttctgaagcggatgaaatggcagcagcacttgaagctgaattgaacgacttcatg
tga
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