Calonectris borealis (Cory's shearwater): 142079458
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Entry
142079458 CDS
T11211
Symbol
OPTN
Name
(RefSeq) optineurin isoform X1
KO
K19946
optineurin
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04137
Mitophagy - animal
cbor04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
142079458 (OPTN)
04137 Mitophagy - animal
142079458 (OPTN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbor04131
]
142079458 (OPTN)
Membrane trafficking [BR:
cbor04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
142079458 (OPTN)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
142079458 (OPTN)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
142079458 (OPTN)
Xenophagy
Cargo receptors
142079458 (OPTN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CC2-LZ
NEMO
zf_C2H2_10
DUF6439
EDR4-like_1st
Motif
Other DBs
NCBI-GeneID:
142079458
NCBI-ProteinID:
XP_074999797
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All DBs
Position
1:7684892..7706061
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AA seq
558 aa
AA seq
DB search
MSSKLKSRPAENGEHPRSKMENGTDSMAAPALSTYTPEEMVQQMKELITENNELKEAMKL
HNQAMKDRYEELSIWREKQKEEREFYELKFKEAKQCLLAKCIENEQLQQQLQNLKEREEG
TEMEGCVAPEKEARQLKSQVQRLQAEKADLLAIISELQIKLNISSAEDSFVEIGMNEGEI
NRTAKEHQEKSGEMTSNVDIYVRSKPADESKNLESEELTVSQLLCCLRNETQRREKLEKE
LRDHRERLSKLEKETSNCLESGTQTQQEEEESSEAVGSEVETLNLQVCALFKELQEAHEK
LKEAELIQKKLQEKCQVLERKSSTAASELEEKQQLIYTIKKLELQVESMQAEVKLEQAKT
HEEKARCNSLQDAYSKLLPELTEAMKTINEMKLKELDRVDKVVVEQLNAKVELAEQALAA
KQLQIDEMKQIIAKQEEDLETMAVLRAQMEVYCSDFHAERAAREKIHEEKEQLAVQLAYL
LKEQQNLEDLGRNSLAEMQNRHGARAPDREHSPRLVQRGTGSQDWPEQRNISMYSCPKCE
EILPDLDTLQIHVMDCIN
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaagttgaagagccgtcctgctgaaaatggagagcatcccaggagtaaaatg
gaaaacggaacagacagcatggctgcccctgcccttagtacctacaccccagaagagatg
gtacaacagatgaaagaactaatcactgagaacaatgagttaaaagaagccatgaagttg
cataaccaagctatgaaggaccgatatgaggaactttccatctggcgagagaagcagaag
gaagaacgagaattttacgagttaaaatttaaggaggctaagcagtgcttgctagccaag
tgcattgaaaatgaacagctacagcaacaacttcagaacttaaaggaaagagaagaagga
actgaaatggagggctgcgtggctcccgagaaggaagcgaggcagctgaaatcccaggtg
cagcggctccaggctgagaaggcagatctgttagccatcatttcagaactgcagatcaag
ctgaacatctcctcagcagaagattcctttgtggagattgggatgaacgaaggagaaata
aatagaaccgcaaaggaacatcaagagaagagtggtgaaatgaccagtaacgttgatatc
tacgtcaggagcaaacctgcagatgaatcaaagaatttggagtctgaggagctaactgtg
agccagctgctctgctgccttagaaatgaaactcagaggagggaaaaacttgagaaggag
ctgcgggatcacagagagagactgtcaaagctggagaaggagaccagcaactgcctggag
agtgggacacaaactcaacaggaagaagaggagagttcagaggctgttggcagtgaagta
gaaaccctgaatttgcaagtttgtgctctgtttaaagagcttcaggaagcccatgagaag
ttaaaagaagcagaattgattcagaagaagcttcaagaaaagtgccaagtactggaaaga
aaaagctcaactgctgcatcagaattggaggagaagcagcagctaatatacaccatcaag
aagctggaacttcaggtggagagcatgcaggcagaggtcaagctggaacaagccaagaca
catgaagaaaaggcaagatgtaatagcttgcaggatgcatacagcaaactccttcctgaa
ctcactgaggcaatgaaaacaatcaatgaaatgaaactcaaagagctggacagagtggat
aaagtggtggtggaacaactgaatgcaaaggtggagttggcagaacaagcccttgctgca
aagcagctccagatagatgaaatgaagcagataattgctaagcaagaggaggaccttgaa
accatggctgtgctccgtgctcagatggaggtttattgttctgacttccatgctgagagg
gcagcaagagagaagatccatgaggagaaggagcagttggctgtccagctggcatacctg
ctaaaagagcagcaaaaccttgaagatcttggccgaaactctttggcggagatgcagaat
cgccacggagccagggcaccagatcgggaacactcacctcgtcttgtccaaagaggaact
ggtagtcaagactggccagagcagcggaatatctcaatgtattcatgtcccaaatgtgaa
gaaattctacctgatttggacacactgcaaattcacgttatggactgcattaattga
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