Calonectris borealis (Cory's shearwater): 142079481
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Entry
142079481 CDS
T11211
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbor04131
]
142079481 (VPS50)
Membrane trafficking [BR:
cbor04131
]
Protein recycling
Others
EARP complex
142079481 (VPS50)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
DcpS_C
Motif
Other DBs
NCBI-GeneID:
142079481
NCBI-ProteinID:
XP_074999853
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Position
2:complement(144807562..144903792)
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AA seq
975 aa
AA seq
DB search
MQKIKSLMTRQGLRSPQESVHDLSPIESFRIPSKEELRELREEPTDPQAQQEIINSIEEV
YFSNDSFDIVKYELERLPPVLSLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVQELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQTSLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDISHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRTMQWHENHDQDEAAAVTSV
SDGSNVIGTEENSFDRSYVKKKLEHGLSRIWQDVQLKVKTYLLGTDLSNFKYDDFIFVLD
VISRLMQVGEEFCGSKSEVLQESIRKQSVNYFKTYHRTRLEELRMFLENETWELCPVKSS
FSILQLHVCSMNNTYEFKFMEQSRSPSVSPSKQPASAISTTLTLFEQYCNGGNPFEIQAD
SKDDETEDVLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETL
RSRKRSDYNLNKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYA
VYTFFGRNDTFESTGLGLSSSRLRTTLNRIQESLIDLEVSADPTGTLTAAEERKEKVPSP
HLSHLVVLTSGNSLYGLAERVVATESLVFLAEQFEFLQPYLDAVMPAAKKPFLQQFYSQT
VSTASELRKPVYWIVAAKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKEFEEFNRR
LNEVSKRVRIPLPVSNILWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLE
KLTDIRPIPDKEFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKAR
QKLLAAIDDIDRPKR
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtcgctgatgacccgccagggtctaagaagtcctcaggagagtgtt
catgacctcagtcctattgaaagctttcggattcctagtaaggaggagctcagagaacta
cgtgaagaaccaactgatcctcaagctcagcaagaaataattaacagcattgaagaagtt
tatttttccaatgattcctttgatattgtgaagtatgagttagagaggcttcctccagta
cttagtcttcaagaactagaagagtacagagacaaattaaaacaacagcaagctgctgta
tctaagaaagtggcagacttgattcttgaaaaacagcctgcatatgttcaggaacttgaa
cgtgttacatcattgcagactggccttcagttagcagctgttatttgcacaaatggaaga
agacacctgaatatagcaaaggaaggcttcacacaaactagtttggggcttcttgcaaat
caaaggaaacgacagttgcttattggactgctaaagtctctgagaacaataaaaacactg
caaagaactgatgtgcgtttgagtgagatgttggaggaagaggactatccaggagctatt
cagctgtgcttggaatgccagaaagctgccagcactttcaaacactacagttgtataagt
gagttgaattcaaaactgcaagacaccttggaacaaatagaggaacaattggacgtagcg
ctctccaaaatatgcaagaactttgatatcagtcattatacaaaggttcagcaggcttac
aggctgcttggaaaaacacagacagcaatggaccagttacatatgcacttcactcaagcc
attcataacactgtgtttcaagtagtccttggatatgtggagctgtgtgctggaaacaca
gacaccaagtttcagaagttacagtacaaagacctctgtacacatattacatcagacagc
tacattccatgccttgctgatctctgtaaagccctctgggaagtcatgctcagttactac
cgaacgatgcagtggcatgagaatcatgaccaagatgaggcagcagctgtgacttctgtt
tcagatggcagcaatgtaattggaacagaagagaacagttttgaccgcagctatgtaaaa
aagaaattggaacatgggctttcacgaatatggcaggatgttcaactgaaagtgaaaaca
tatcttctgggaacggatctgtctaacttcaaatatgacgacttcatatttgtacttgat
gttatcagcaggctgatgcaagttggagaagaattttgtggcagtaagtctgaagttttg
caagaatctatcagaaaacaaagtgttaactacttcaaaacataccacagaacccgtctt
gaagaattaagaatgtttttagagaatgagacctgggaactttgtcctgttaaatcaagc
tttagtattctgcagcttcatgtatgttctatgaataacacatacgaatttaagttcatg
gagcagtcacgttcaccatctgtgtcacctagtaagcagcctgcttcagcaatttcaaca
acactaacgttatttgagcagtactgtaacggaggaaacccatttgaaattcaggctgac
agcaaagatgatgagacagaagacgtgttagcttccaatgggtatgaatcggatgaacaa
gaaaaaagtgcatatcaagagtatgatagcgacagtgatgttcctgaagagttgaaaaga
gattatgtggatgagcagacaggagatgcccctgtgaaaagtgtttctcgagaaactctg
aggagcagaaagagatcagattataacctcaataaagtgaatgcacctatcctaacaaac
actacgctgaatgtaataaggcttgttgggaaatacatgcagatgatgaatattctgaaa
ccaattgcatttgatgtgatccacttcatgtcgcagctcttcgattactatctgtatgca
gtctatactttttttggccgaaatgacacgtttgaatcaacaggactgggcctcagtagt
agcagattacgcaccacactgaacagaatccaggagagtctgattgatctggaagtctct
gctgacccaacaggaactctcacagctgctgaagagagaaaggaaaaggtgccaagccca
catctcagtcatctcgtagttttgacatctggcaattcgctatatggtttggcagagaga
gtggtggccacggaatcactggtatttctggctgagcagtttgagtttcttcagccttat
ctggatgcagtgatgccagctgccaagaagccttttcttcagcagttctattctcagaca
gtgtcaactgccagtgaactacgtaaaccagtttattggattgttgctgctaaagccatt
gattatgaacaaatgctgcttctcatggctaatgtgaaatgggatgtgaaggaaatcatg
tcacaacacaatatatatgtagatgctcttttaaaggaatttgaagaatttaacagaagg
ttgaacgaggtgtctaagagagtccgtattccactgccagtctccaacatcctttgggag
cactgcatacgcttggccaatagaactctcgtggaaggttatgccaatgtaaagaagtgc
agcaatgaaggacgtgccttgatgcaactggattttcaacaattcttaatgaaactagaa
aagttaacagacattaggcctattccagataaagaatttgtggagacctacattaaagca
tactacctaacagaaaatgacatggaacgctggataaaagaacatagggaatattccact
aagcagttgaccaatctggtgaatgtttgtctgggatcccacatcaacaaaaaggcaaga
cagaagctgctagctgctattgacgacatagacaggcctaaaagataa
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