Calonectris borealis (Cory's shearwater): 142079593
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Entry
142079593 CDS
T11211
Symbol
ITGB1
Name
(RefSeq) integrin beta-1 isoform X1
KO
K05719
integrin beta 1
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor03271
Virion - Rotavirus
cbor04145
Phagosome
cbor04510
Focal adhesion
cbor04512
ECM-receptor interaction
cbor04514
Cell adhesion molecules
cbor04530
Tight junction
cbor04810
Regulation of actin cytoskeleton
cbor04820
Cytoskeleton in muscle cells
cbor05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
142079593 (ITGB1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
142079593 (ITGB1)
04514 Cell adhesion molecules
142079593 (ITGB1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
142079593 (ITGB1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
142079593 (ITGB1)
04530 Tight junction
142079593 (ITGB1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
142079593 (ITGB1)
04810 Regulation of actin cytoskeleton
142079593 (ITGB1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
142079593 (ITGB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbor04131
]
142079593 (ITGB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cbor04147
]
142079593 (ITGB1)
04515 Cell adhesion molecules [BR:
cbor04515
]
142079593 (ITGB1)
04090 CD molecules [BR:
cbor04090
]
142079593 (ITGB1)
Membrane trafficking [BR:
cbor04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
142079593 (ITGB1)
Exosome [BR:
cbor04147
]
Exosomal proteins
Proteins found in most exosomes
142079593 (ITGB1)
Cell adhesion molecules [BR:
cbor04515
]
Integrins
Integrin beta subunits
142079593 (ITGB1)
CD molecules [BR:
cbor04090
]
Proteins
142079593 (ITGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
142079593
NCBI-ProteinID:
XP_075000146
LinkDB
All DBs
Position
2:complement(155260752..155309138)
Genome browser
AA seq
805 aa
AA seq
DB search
MFTEMTNLKLLTWAGILCCLIWNGFAQQSGSDCIKANAKSCGECIQAGPNCGWCKKTDFL
QEGEPTSARCDDLAALKSKGCPMEDIENPRGSKQVLEDREVTNRKIGAAEKLKPEAITQI
QPQKLVLKLRVGEPQTFSLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTALMLEME
KITSDFRIGFGSFVEKTVMPYISTTPAKLRNPCTGDQNCTSPFSYKNVLSLTSEGNKFNE
LVGKQHISGNLDSPEGGFDAIMQVAVCGEQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIV
LPNDGKCHLENNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQAVYKELKNLIPK
SAVGTLSSNSSNVIQLIIDAYNSLSSEVILENSKLPKGVTISYKSFCKNGVNDTQEDGRK
CSNISIGDEVKFEINVTANECPKKGQNETIKIKPLGFTEEVEINLQFICECQCQSEGEPN
SPACHEGNGTFECGACRCNEGRIGRLCECSTDEVNSEDMDAYCRRENSTEICSNNGECIC
GQCVCKKRENTNEVYSGKYCECDNFNCDRSNGLICGGNGICKCRVCECFPNFTGSACDCS
LDTLPCMATNGQVCNGRGTCECGTCNCTDPKFQGPTCEMCQTCLGVCAEHKDCVQCRAFD
KGEKKETCSQECMHFNMTRVESRDKLPQPGQPDPLSHCKEKDVDDCWFYFTYSVNSNGEA
NVHVVETPECPSGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNA
KWDTGENPIYKSAVTTVVNPKYEGK
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgttcacagagatgactaatttaaaattgctcacgtgggctggcatcctctgttgcttg
atatggaatggatttgctcagcaaagtggaagcgattgcataaaagctaatgcaaaatca
tgtggtgaatgtatacaagcaggaccaaactgtggttggtgtaaaaaaacagactttttg
caagaaggagaaccaacatctgcgcgatgtgatgacttggcagcactaaagagtaaaggc
tgtcctatggaagatatagaaaatcccagaggtagcaaacaggtgcttgaagatagagaa
gtaacgaatcgtaagataggtgctgcagagaagctgaagccagaggccattacacagatc
cagccacaaaaattagtactgaaactcagagtcggggaaccccaaacattttcattaaaa
tttaagagagctgaagattaccctattgacctttattatcttatggacctctcctattct
atgaaagatgatttagagaatgtgaaaagtctcggaacggctctgatgttagaaatggaa
aaaataacttcagactttcgaattggcttcggctcttttgtggagaaaactgtgatgcca
tatataagtacaacaccagccaaactcagaaatccttgtacaggtgaccagaactgtaca
agtccatttagctataaaaatgtgctcagccttaccagtgaaggaaataaattcaatgaa
cttgtaggtaaacagcacatttctgggaatttagattctcctgaaggtggatttgatgca
ataatgcaggttgcagtttgtggggaacaaattggctggagaaatgttacaagactacta
gtgttttccacggatgctggatttcactttgcaggagatggtaaacttggtggaattgtt
ttaccaaatgatgggaaatgtcatctggaaaataatatgtacacaatgagccactattat
gattatccctctattgctcatctggtacagaagcttagtgagaacaatattcagacaatc
tttgccgttactgaagagtttcaggcagtttataaggaattgaaaaatctgataccaaaa
tcagcggtgggaacgttgtcttcaaactccagcaatgtgattcagctgatcattgatgca
tacaattccctttcttcagaggttatcctggaaaacagtaagctaccaaaaggagtgaca
atcagttacaagtctttctgcaagaatggagtgaatgacacacaagaagatggaaggaaa
tgttctaacatttcaatcggagatgaggttaaatttgagattaatgtaacagctaatgaa
tgtccaaagaaaggacaaaatgaaacaattaaaattaaaccgctgggattcactgaagaa
gtggaaattaatctccagttcatctgtgaatgccagtgtcaaagtgaaggagaacctaat
agtccagcctgccacgaaggaaatggaacatttgaatgtggtgcatgcagatgtaatgaa
ggacgtattggaagactatgtgaatgtagtacagacgaagtaaatagtgaggatatggat
gcttactgcaggagggagaacagtacagaaatatgcagtaataatggagaatgcatttgt
ggacaatgtgtatgcaagaaaagagaaaacaccaacgaagtgtattctggcaaatattgt
gaatgtgataacttcaactgtgatcgatcaaatggtttgatttgtggaggaaatggtatc
tgcaaatgcagagtgtgtgagtgtttccccaacttcactggcagcgcatgcgattgttct
ttggatactcttccatgtatggcaactaatggacaggtttgcaatggaagaggaacctgc
gaatgtgggacctgtaattgtacagatcccaaattccaaggccccacatgtgaaatgtgt
cagacttgcctcggtgtctgtgcagagcacaaggactgtgttcagtgtagagcttttgat
aagggagaaaagaaagaaacatgttctcaggaatgtatgcatttcaacatgacacgggta
gaaagtcgagacaaattgccgcagcccggacagcccgatccattgtctcattgcaaagag
aaggatgttgatgactgctggttctacttcacatattctgtcaattcaaatggtgaagcc
aatgtccacgtggtagagaccccagaatgccccagcggccctgacatcattcccattgta
gctggtgtggttgctggaattgttcttattggacttgcattattattgatttggaaacta
ctaatgatcattcatgacagaagagaatttgctaaatttgaaaaggagaagatgaatgcc
aagtgggatacgggtgaaaatcctatttacaagagtgcagtgacaactgtggtcaatcct
aaatatgagggaaaatga
DBGET
integrated database retrieval system
