Calonectris borealis (Cory's shearwater): 142079748
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Entry
142079748 CDS
T11211
Symbol
SMARCD3
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
142079748 (SMARCD3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbor03021
]
142079748 (SMARCD3)
03036 Chromosome and associated proteins [BR:
cbor03036
]
142079748 (SMARCD3)
Transcription machinery [BR:
cbor03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
142079748 (SMARCD3)
Chromosome and associated proteins [BR:
cbor03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
142079748 (SMARCD3)
PBAF complex
142079748 (SMARCD3)
GBAF(ncBAF) complex
142079748 (SMARCD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
142079748
NCBI-ProteinID:
XP_075000599
LinkDB
All DBs
Position
2:171511407..171626945
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AA seq
456 aa
AA seq
DB search
MPSGARMPHQGAPMGPPGPPYVGSPSVRPGMPQTVMETTRKRTAPQQVQQQQVQQQVQQQ
QQATQNRTRSAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEAL
KRPMKQKRKLRLYISNTFNPAKSDADDSDGSIASWELRVEGKLLDDLSKQKRKFSSFFKS
LVIELDKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDVSVRCTLLLMLDYQPPQFKLDP
RLARLLGIHTQTRSAIIQALWQYIKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSEIPQ
RLTNLLLPPDPIVINHIISVDPNDQKKTACYDIDVEVEDPLKGQMSSFLLSTANQQEITA
LDNKIHETIESINQLKIQRDFMLSFSKDPKGYIQDLLRSQSRDLKVMTDVVGNPEEERRA
EFYHEPWSQEAVSRYFYCKIQQRRQELEQSLGVRNT
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgccatcaggagctcgaatgccccatcagggggctcccatgggtcccccaggcccccca
tacgttggaagcccctcagtgcgacctgggatgccccagaccgtgatggaaacaacaaga
aaacgcactgcaccacagcaggtccagcagcagcaggtgcagcagcaagtgcaacagcag
cagcaagccactcagaaccgaactaggagtgccaagaggaggaagatggctgacaaaatt
ctccctcagaggatccgggagctggttcctgagtcccaggcctacatggacctgttggcc
tttgaacgcaaactagaccagaccattatgcggaagcgtgtggatattcaggaagcgctg
aagaggccaatgaagcaaaagcggaaactgagactttacatctccaatacatttaacccc
gcaaaatctgacgctgatgactctgatggcagcattgcttcctgggagctgcgagtggag
gggaagctcctggatgacctcagcaaacagaaacggaagttttcgtctttttttaagagt
ttggttattgaactggacaaagacctttatggacctgacaaccatcttgtggagtggcac
agaactcccacaacccaggaaacggatggcttccaggtgaaaagacccggtgatgtcagc
gtgcggtgcacattactcctcatgttggactaccagcctcctcagtttaaactggacccg
cgattagcccgtttgctggggatacacacacagacccgatcagccatcatccaggctctc
tggcagtacatcaaaacaaataagctgcaagactcccatgataaggaatacattaactgc
gacaaatacttccagcagatctttgactgtccacggctaaagttttctgaaattcctcag
agactcactaacctgctactgccaccagaccctatagtgataaaccatatcatcagtgtt
gaccccaacgatcagaagaagacggcttgttatgacatagatgtagaagttgaagaccca
ttaaagggacagatgagtagttttcttctttcaacagctaaccaacaggagattacagca
ttggacaacaagattcacgagacaatcgaatccataaatcagttaaaaatacaacgtgat
ttcatgctgagtttctccaaagatcccaaaggatacatccaagaccttctccggtcccaa
agtagggatcttaaggtgatgactgatgtagttggaaacccagaggaagaacgcagagct
gaattttatcacgagccatggtctcaagaggctgtgagcagatatttctactgcaagatc
cagcagcgccggcaggaactggaacaatctctgggagtgcgcaacacataa
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