Calonectris borealis (Cory's shearwater): 142079772
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Entry
142079772 CDS
T11211
Name
(RefSeq) sphingomyelin phosphodiesterase 5-like
KO
K12352
sphingomyelin phosphodiesterase 3 [EC:
3.1.4.12
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor00600
Sphingolipid metabolism
cbor01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
142079772
Enzymes [BR:
cbor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
142079772
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Motif
Pfam:
nSMase_N
Exo_endo_phos
Hepcidin
UL45
Motif
Other DBs
NCBI-GeneID:
142079772
NCBI-ProteinID:
XP_075000620
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All DBs
Position
2:578249..581486
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AA seq
503 aa
AA seq
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MLLPESPFPSRALAALDCLAWGLVSPSFWAVNRLLDLRQTTAEQRRQRRSRCGWCCGCAG
QVLAGLAYTALLLLALPVAALGLLLWLPVEAARRPFVYQYTAGTAPAEPWDLRQRRTFTF
VSANLCLLPSGLAKFSNLGQTPQRAAYIARHLAPVPPDPPGTRASLVEPRHGEANSYGGT
LCTPRQPPGSVAVEVPAEAAEPVPAVLSERFPADADFVCLQEVFEAGAAACLRRRLGGTF
PHVLSEVGARGLRGGRLKLLDSGLFLASRYPLLAARYHGFPNGAREDALAAKGLLAVQVL
LGSAQGRRVVGYVGCTHLQAPAADAAIRDAQLTLGLRWLQLFREAQEQRGDVVAFDVFCG
DLNFDNCSPGDELNQRHQLFEVYRDPCRRAPGQDAPWAIGTLLNYLKIYEEPVSTPEKLK
RTLSQSAGRQRYLAGPILSSGQPDPAAPSPWQGRRVDYILYRQHRGALPLRTEVAGVSFI
TQLATRSDHLPVALRLDVAPAPP
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgccggagtcccccttccccagccgggcgctggcggccctggactgcctggcc
tgggggctggtcagccccagcttctgggccgtcaaccgcctcctcgacctgcggcagacg
acggcggagcagaggcggcagcggcggagccggtgcgggtggtgctgcggctgcgccggg
caggtgctggcagggctggcgtacaccgcgctgctgctgctggcgctgcccgtggccgcg
ctggggctgctgctgtggctgccggtggaggcggcgcggcggccgtttgtctaccagtac
acggcgggcacggcgccggcggagccgtgggacctgcggcagcgccgcaccttcaccttt
gtcagcgccaacctctgcctgctgcccagcggcctggccaagttcagcaacctggggcag
acgccgcagcgtgccgcctacatcgcccgccacctcgccccggtgccaccggaccccccc
ggcacccgggccagcctggtcgagccgcggcacggcgaggccaacagctacggcgggacc
ctctgcaccccgcggcagccccccggcagcgtggccgtggaggtgccggcggaggcggcc
gagcccgtgccggcggtcctgtccgagcgcttcccggcggacgccgacttcgtctgcctg
caggaggtcttcgaggcgggcgccgccgcctgcctgcgccggcggctgggcggcaccttc
ccgcacgtcctctccgaggtgggcgcccgcgggctgcggggcggccggctgaagctgctc
gacagcgggctcttcctggccagccgctacccgctgctggcggcgcggtaccacggcttc
cccaacggcgcccgggaggacgccctggccgccaaggggctgctcgccgtccaggtgctg
ctgggctcggcgcaggggcggagggtcgtgggctacgtcggctgcacccacctgcaggcg
cccgcagccgacgccgccatccgggacgcgcagctgacgctggggctgcgctggctgcag
ctcttccgggaggctcaggagcagcgcggggacgtggtggccttcgacgtcttctgcggg
gacctcaacttcgacaactgctccccaggcgacgagctcaaccagaggcaccagcttttc
gaggtgtaccgggacccctgccgccgggcgcccgggcaggacgcgccctgggccataggc
acgctgctcaactacctgaagatctacgaggagcccgtgtccaccccggagaagctgaag
aggacactctcgcagtcggcggggcggcagcggtacctggcgggcccgatcctctccagt
gggcagcccgacccagcggcccccagcccctggcagggccggcgcgtggactacatcctc
taccgccagcaccgcggggccctgccgctgcggacggaggtggcgggggtctccttcatc
acccagctggccacccgctccgaccatctgcccgtggccctgcggctcgacgtggccccc
gcgcccccctga
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