Calonectris borealis (Cory's shearwater): 142080166
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Entry
142080166 CDS
T11211
Symbol
TRAPPC12
Name
(RefSeq) trafficking protein particle complex subunit 12 isoform X1
KO
K20309
trafficking protein particle complex subunit 12
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbor04131
]
142080166 (TRAPPC12)
Membrane trafficking [BR:
cbor04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
142080166 (TRAPPC12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_12
TPR_6
TPR_16
ARM_TT21_2nd
Coatomer_E
ANAPC3
TPR_MalT
Phage_tail_X
Motif
Other DBs
NCBI-GeneID:
142080166
NCBI-ProteinID:
XP_075001223
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Position
3:complement(20317560..20375367)
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AA seq
790 aa
AA seq
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MENNESNTKDVKGTSDEDDSGGIVQQKTQEEILFHEETIDLGGDEFESEGNVTVSEDSNH
FVDKLNEQMMESVIISDSPNNSEDDTGELGCLQEIVEQMEAKDNKKTQAEVDKEEFISNE
SETEHEETPKDISEIGTDDQASLKEESIQEAVKEEPKLGNNVPVETKPNNIDESKPEDQI
SSPSTSKPSSEAEPIPVCTIFSQANSVNTQPQLFLPDGFEPQMVKSPSFSSIIETPVKSN
PQVVQPSPSLSKFFGDTINTNTLASDFFDSFTTSSFISVSNPNASSSVPEQMSSLANGGD
NSCTSSNPTFSVRNGRPEAGGPPSSLEITQSPKPFSQIQAVFAGSDDPFATALNMSELDR
RNDAWLPSEETRNVLISVATQQYSTVFIDKENLTMPGLKFDNIQGDAVKDLMLRFLGEQA
AVKRQVLNANSVEQSFVGLKQLISSKNWRAAVDLCGRLLTAHGQGYKKSGLPTSHTTDSL
QLWFVRLALLVKLNLFQNAEMEFEPFGNLDQPDLYYEYYPHVYPGRKGSMVPFSMRILHA
ELPQYLGNPQESLDRLHSMKIVCAKILENLEQGLAEDGSMTNITQENRQASVQLWRSRLG
RVMYSMANCLLMMKDYVLAVDAYHTVIKYYPQQEPQLLSGIGRIFLQIGDIKTAEKYFQD
VEKVTHKLDGLQSQIMVLMNRAFLHLGQNNFAEAHRFFTEILRIDSSNAVANNNAAVCLL
YLGKLKDSLRQLEGMVQQDPKHYLHESVLFNLTTMYELESSRSMQKKQALLEAVAIKEGD
SFNTQCLKLG
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggagaataatgaaagtaatactaaagatgtgaagggcacctcagatgaagatgacagc
ggaggcatagttcaacagaaaactcaggaagaaattctctttcatgaagaaaccattgat
cttggtggagatgaatttgagtctgaaggaaacgtaactgtatcagaagattcaaatcat
tttgtagataaacttaatgaacaaatgatggagagtgtcattatttcagattctccaaac
aacagtgaagatgacacaggtgaacttggttgtctccaggagattgtagaacaaatggaa
gctaaagataataaaaaaacacaagcagaagtggataaagaagagtttataagtaacgag
agtgaaactgaacatgaagaaacaccgaaagacatttctgagattggaacagatgatcag
gcatctttaaaggaagaatcaattcaggaagcagtgaaggaggaaccaaagttgggaaac
aacgtgcctgttgaaacaaaaccaaataatattgatgaaagcaaacctgaggatcagata
tcatcacccagtactagcaaaccatcttctgaggctgagcctattcctgtgtgtaccatc
ttcagccaagcaaacagtgttaatacccagccacagttgttcctacctgatggttttgag
cctcagatggtaaaatctcccagttttagtagtataattgaaactccagtgaagtctaat
ccacaggtggttcaaccaagtcctagtctaagcaaattctttggcgataccattaacact
aatactttagcttctgatttttttgattcatttaccacatccagttttatttctgttagt
aatcccaatgcaagctcttcagttccagaacaaatgtcctctcttgctaatggtggagac
aattcttgtacttcatctaaccctactttctctgtgcgaaatggcagacctgaagcaggt
ggtcctccatcatctctagaaataactcaatcccccaagcccttctcacaaatccaagct
gtttttgctggcagtgatgacccatttgccacagccttaaatatgagtgaactagataga
agaaatgatgcatggcttcctagtgaggaaaccagaaatgttctaatttcagttgccaca
caacaatacagcaccgtgttcatagataaagagaatctcaccatgcctggattaaaattt
gataatatccagggagatgcagtaaaagacttaatgcttcgcttcttgggggagcaagct
gcagtgaagagacaagttttaaacgcgaactctgtagaacagtcatttgtaggcttgaaa
cagctaattagcagtaaaaactggagggcagcagttgacttgtgtgggcggcttctaact
gcacatggtcaaggctataaaaaaagtggactacctactagccatacaacagattcttta
cagctgtggtttgtgagactagcactgctggtaaaactgaatctattccaaaatgcagaa
atggaatttgaaccatttggaaatttagaccagcctgatctttattatgaatattaccct
catgtataccccggacgaaaaggttccatggttcctttctccatgcggattttacatgcc
gaacttcctcagtacctaggtaatcctcaggaatcacttgacagactgcatagtatgaag
atagtctgcgccaagatattagaaaatttggaacaaggcttagctgaagatggaagtatg
actaacattacacaggagaacagacaagcctctgttcagctgtggaggtcacgtctgggc
cgggtgatgtactccatggcaaactgtctgctaatgatgaaggactatgtgcttgctgta
gatgcttatcacaccgtcatcaaatattacccacaacaagagcctcagctgttgagtgga
attggaaggattttccttcagattggagacataaaaactgcagaaaaatactttcaagac
gttgagaaagtgactcacaaattggatggactacagagccaaattatggttttaatgaac
agagcatttctccaccttggccagaataattttgcagaagctcatcgatttttcacagaa
attttaaggattgactcatcaaatgctgtggctaataacaatgccgctgtttgtcttctt
tatctgggaaaactgaaggattccctccggcagttggaaggaatggttcagcaggaccct
aaacactacctacatgagagtgttctcttcaacttgacaactatgtatgaactggagtca
tctcgcagtatgcagaagaagcaggcacttttagaggctgtagctatcaaagagggcgat
agctttaatactcagtgtctcaagttaggatag
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