Calonectris borealis (Cory's shearwater): 142080690
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Entry
142080690 CDS
T11211
Symbol
OPN3
Name
(RefSeq) opsin-3
KO
K04256
c-opsin
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cbor01009
]
142080690 (OPN3)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cbor04030
]
142080690 (OPN3)
Protein phosphatases and associated proteins [BR:
cbor01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
142080690 (OPN3)
G protein-coupled receptors [BR:
cbor04030
]
Rhodopsin family
Vision
Opsin
142080690 (OPN3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
142080690
NCBI-ProteinID:
XP_075002634
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All DBs
Position
3:complement(87572574..87598850)
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AA seq
395 aa
AA seq
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MHSGNSTGTTSRPEPAVAEQEVPGERPLFSAGTYELLALLVATIGMLGLCNNLLVLVLYY
KFKRLRTPTNLFLVNISLSDLLVSVFGVSLTFMSCLRSRWVWDAAGCVWDGFSNSLFGIV
SIVTLTVLAYERYIRVVHAKVIDFSWSWRAITYIWLYSLAWTGAPLLGWNRYTLEIHGLG
CSVDWKSKDPNDTSFVLLFFLSCLVAPVGIMAYCYGHILYAVRMLRCVEDFQTVQVIKLL
KYEKKVAKMCFLMISTFLICWMPYAVVSLLVTYGYSNLVTPTVAIIPSFFAKSSTAYNPV
IYIFMSRKFRQCLLQLLCFRLMRFQRTVKETPATGNDKPIRPIVMSQKAGDRPKKKVTFS
SSSVIFIITSDDTQQIDDNSKHNGTKVNVIQVKPL
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgcactcggggaacagcacgggcacgacgagccgcccggagcctgcggtggcggagcag
gaggtgccgggcgagcggccccttttcagcgccggcacctacgagctgctggcgctgctc
gtcgccaccatcggcatgctgggcttgtgcaacaacttgctggtgctggtgctctactac
aagttcaagcggctccgcacgcccaccaacctcttcctcgtcaacatcagcctcagcgac
ctgctggtgtccgtcttcggcgtgagccttaccttcatgtcctgcctgaggagccgctgg
gtgtgggacgccgccggctgcgtctgggacggcttcagcaacagcctcttcggaattgtt
tcaattgtgactctcactgttcttgcctatgaacgctacattcgagtagtccacgcaaaa
gtgattgacttctcgtggtcttggcgggctatcacgtacatctggctctattcattagcc
tggactggagcacctcttttgggctggaacagatacacactggaaattcatggattaggt
tgctcagtggactggaaatcaaaagaccccaatgatacatcctttgtgctcctttttttc
cttagctgtctagtagcacctgttgggatcatggcctattgctatggccatattctatat
gcagtaagaatgcttcgctgtgtggaagatttccagactgttcaagtgatcaaacttcta
aaatatgaaaagaaggtggctaaaatgtgtttcttaatgatctccacgttccttatttgt
tggatgccctatgcagtggtctccctcctggtaacatatggctatagcaaccttgtaact
ccaacagtagctatcatcccatctttctttgccaagtcaagcactgcttataatccagtc
atctatatcttcatgagtagaaagtttcgacaatgccttttgcaactcctgtgctttcgc
ctgatgagattccagaggactgtaaaagagacaccagcaacagggaatgacaaaccaata
cgaccaatagttatgtctcagaaagcaggggacaggccaaagaagaaggtgactttcagt
tcttcctctgtcatttttattatcaccagtgatgatactcagcaaatagatgacaacagt
aaacacaatgggacaaaagtaaatgtcatccaagtaaagccactatag
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