Calonectris borealis (Cory's shearwater): 142081009
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Entry
142081009 CDS
T11211
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
142081009 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbor03021
]
142081009 (POLR1B)
Enzymes [BR:
cbor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
142081009 (POLR1B)
Transcription machinery [BR:
cbor03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
142081009 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
PBP_GOBP
Motif
Other DBs
NCBI-GeneID:
142081009
NCBI-ProteinID:
XP_075003506
LinkDB
All DBs
Position
3:114887423..114907527
Genome browser
AA seq
1011 aa
AA seq
DB search
MPQGTIKQPLGYIPIMVKSKLCNLYNLSPQELIQHHEEEEEMGGYFIINGLEKVIRMLIM
PRRNFPLAMTRHKWKNRGPGFTEYGVVMHCVKDEHTAINMNLHYLENGCVMVNFIFQKEL
FFLPLGFALKALVNFPDYQIFEELIKEKEGDTFYVNCVTEMMRAVVDAGCFTQQNVLEYL
GKSFRIKLNLPEWYSNEQAADFILNKCICIHLTNRTEKFYLLCMMTRKLYAFAKGECMED
NPDSLMNQEVLTPGQLFLMFLKERLESWLQSVKFVLEKRTEKADIGINADSLVKAFSLAT
DFTKPFEYLLATGNLRSKTGLGMLQDSGLCVVGDKLNFIRYLSHFRCIHRGAAFSQMRTT
TVRKLLPESWGFLCPVDTPDGEPCGLMNHMTAVCEIVTEMVPVTDIPPLLCSLGVTPIDA
TPSKPYAECYRVVLDGSVVGWVEWELAPEIAETLRRFKITQEKRFPARAEVVLIPITGKP
SLYPGLFIFTTPCRMVRPVRNLFYGRNEWIGTLEQIFMNVASLESEVVPGMTTHQELFPH
SILSVVANLIPFSDHNQSPRNMYQCQMGKQTMGFPVYNYKDRSDNKLYHLHTPQSPLVRP
SMYDYYGMDSYPIGTNSIVAVISYSGYDMEDAMIVNKSSWQRGFAYGSVIKMESIDLSLK
ASRAGDNLVFGVRPGDPNLTEKLDADGLPFVGSILQPGDPFYSFMNLNTGETFTVYYPNK
EVGVVDNVRLCSNDRGTGKFKKACITVRVPRNPTVGDKFASRHGQKGILSQLWPVEDMPF
TENGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGVSYDATPFTFTEKNSALKYFGE
TLVSAGYNFFGTEKMYSGISGLELEAEIFVGVVYYQRLRHMVSDKFQVRTTGPRDAVTNQ
PVKGRNVEGGIRFGEMERDALLAHGTSFLLQDRLFNCSDGSIAYVCMSCGSMTSPVLEKP
PHSSSVTSNRRYSCSVCSEVDTIEVVPVPHVFRYFVAELAAMNIKTKLNVE
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgccacaagggactattaaacagcccctggggtatattccaatcatggtgaagtccaag
ctgtgcaacctctataatctctctccacaagagctcatacagcaccatgaggaggaagag
gaaatgggaggttactttataattaatggcttagaaaaagttattaggatgctgattatg
cccaggcgaaatttccctcttgcaatgacgagacacaaatggaaaaacagaggccctggt
ttcacagagtacggagtagtgatgcactgtgttaaggatgagcacactgcaataaatatg
aaccttcattacttggaaaatggttgtgtcatggtgaatttcatttttcagaaagagttg
ttcttccttccgttgggatttgctctgaaggcattagttaatttcccagactaccagatt
tttgaagagttgatcaaagagaaggaaggtgacaccttttatgtgaactgcgttactgag
atgatgagagcggtagtggatgcaggctgttttacacagcaaaatgtccttgaatacctg
ggaaagagcttcagaataaaacttaaccttcctgagtggtacagcaatgaacaggctgca
gatttcattttgaacaagtgtatctgcatacacctgacaaacagaactgaaaaattctac
ctgctctgtatgatgacccggaagctgtatgcttttgccaaaggggagtgcatggaggat
aatccagacagtctgatgaatcaagaagtgcttaccccaggacagcttttccttatgttc
ttaaaggagaggcttgaaagctggttgcaatctgttaagttcgttttggagaaaagaaca
gaaaaggcagatatcggcataaatgcagacagcttggtgaaggcattcagcctggcaaca
gactttaccaagccatttgaatatcttcttgcaactggtaacctgcgatctaaaaccggc
ctgggcatgttacaggacagcggtctgtgtgtggtgggagacaagctgaatttcattcgc
tacctttctcactttcgctgcatacacagaggggcagcattttcccagatgagaactaca
actgtccgcaagctgctgcccgaatcctgggggttcctgtgccctgtggacaccccggat
ggagaaccctgtggtctgatgaaccacatgacagctgtgtgtgaaatagtgacggagatg
gtgcccgtgacagacattccacctttgttatgttccctaggtgtcacccccattgatgcg
actccaagcaagccttacgcggagtgttacagagttgtgttggacggctctgtggtgggc
tgggtagaatgggagctggctcctgagattgcagaaaccctccgccgtttcaagataaca
caagagaagagatttcctgcacgggcagaagtggtccttatcccaatcacaggaaaaccc
agtctgtatcctgggttgttcatttttaccaccccttgccggatggtgcggcctgtcaga
aacctgttctatggaaggaatgaatggattggtactctggaacagatcttcatgaatgtg
gcctcactggagtcagaagtggtgcctggaatgaccactcaccaggagctcttccctcac
agcattctgagcgtggtggccaacctcatccccttctccgaccacaaccaaagtccacga
aacatgtaccagtgccagatgggaaagcaaaccatggggtttccagtttataactacaag
gaccgctcagataacaagctgtaccaccttcacactccccagagtcctctggtgcggccc
agcatgtatgactattacggtatggacagctatccaatcggcaccaattcaattgtggct
gtcatctcctacagcggctatgacatggaagatgcaatgattgtgaacaaatcttcctgg
cagagagggtttgcctatggaagtgttatcaagatggagagcattgacctttcccttaaa
gccagcagggcaggcgataatttagtatttggcgtcaggcctggtgatccgaaccttaca
gagaagttggatgccgatggactgccttttgttggctccatcctgcagcctggggacccc
ttctacagcttcatgaacctcaacacaggggagaccttcacggtgtactatccgaataag
gaagtcggcgttgtagacaacgtcaggttatgcagtaatgaccgtggcactgggaaattc
aagaaggcttgcataactgtgagggttccccgaaatccaactgtcggagacaaatttgcc
agccgtcacggacagaaaggtatcctgagccagctttggccagttgaggatatgccgttc
acagagaacgggatggttccagacatcctcttcaaccctcatggctttccctcccgtatg
accattgggatgttaatcgagagcatggcagggaagtcggcagcactgcacggtgtctcc
tacgacgccactcctttcaccttcacagagaagaactccgctttgaaatactttggtgag
actttagtgagcgcaggttataacttctttgggacggaaaagatgtacagtggcatcagt
ggcctggaactggaggcagagatctttgtgggagtggtgtactatcagcgcctgcgccac
atggtctcggacaagttccaggtgaggacaacggggccccgagatgctgtcaccaaccag
cccgtcaaggggaggaatgtggaaggtgggattcgcttcggcgagatggagcgtgacgct
ttgctggctcacggcacctctttcttgctgcaagaccgcctgttcaactgctccgatggc
tccatagcctacgtctgcatgagctgcggcagcatgacatctcctgtgctggagaagcca
ccacactcctcctctgtgacaagcaacaggaggtactcctgctctgtctgcagcgaggtg
gacacgatcgaggttgtccctgtgccccatgtcttccgttactttgtggcagagctggca
gccatgaacataaaaacaaagctcaacgtggagtag
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