Calonectris borealis (Cory's shearwater): 142081046
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Entry
142081046 CDS
T11211
Symbol
EIF4A3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor03013
Nucleocytoplasmic transport
cbor03015
mRNA surveillance pathway
cbor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142081046 (EIF4A3)
09122 Translation
03013 Nucleocytoplasmic transport
142081046 (EIF4A3)
03015 mRNA surveillance pathway
142081046 (EIF4A3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbor03019
]
142081046 (EIF4A3)
03041 Spliceosome [BR:
cbor03041
]
142081046 (EIF4A3)
03009 Ribosome biogenesis [BR:
cbor03009
]
142081046 (EIF4A3)
03012 Translation factors [BR:
cbor03012
]
142081046 (EIF4A3)
Enzymes [BR:
cbor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
142081046 (EIF4A3)
Messenger RNA biogenesis [BR:
cbor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
142081046 (EIF4A3)
mRNA cycle factors
Stress granule specific factors
142081046 (EIF4A3)
Spliceosome [BR:
cbor03041
]
Complex C
Other components
EJC/TREX
142081046 (EIF4A3)
Ribosome biogenesis [BR:
cbor03009
]
Eukaryotic type
90S particles
Helicases
142081046 (EIF4A3)
Translation factors [BR:
cbor03012
]
Eukaryotic type
Initiation factors
eIF-4
142081046 (EIF4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
142081046
NCBI-ProteinID:
XP_075003638
LinkDB
All DBs
Position
3:complement(116150894..116158538)
AA seq
412 aa
AA seq
DB search
MSGSAGSGGTAGSARKRLMKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFE
KPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELA
VQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTR
AIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRI
LVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRE
ANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRE
LYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggtcggcgggatctggtgggacggccggctcggcgcggaagcggctgatgaag
gaggaggacatgacgaaggtggagttcgagacgagcgaggaggtggacgtgacgcccacc
ttcgacaccatggggctgcgggaggacctgctgcgcggcatctacgcctacggttttgag
aagccctcggccatccagcagagagccatcaagcagatcatcaaggggagggacgtgatc
gcccagtcacaatcaggaacagggaagacagcaacgttctccatctctgttctacagtgc
ctggatatacaggttcgtgagacccaggcattgatcttggcaccaactcgggagctggct
gtacagattcagaagggtcttcttgctctgggagactacatgaatgtccagtgtcacgcg
tgcattggagggaccaatgtgggcgaagatatccgaaaactggattatgggcagcatgtt
gttgctggcactccaggccgtgtgtttgatatgatccgtcgtcgaagtttaaggactcgt
gccatcaaaatgctggttttggatgaagcagatgaaatgcttaataaaggttttaaggag
cagatttatgatgtgtacagatacttgcctccagctacacaggtggttctgatcagcgcc
actttgcctcatgaaattctggagatgaccaacaaattcatgacagaccccattcgcatc
ttggtgaaacgtgatgagttgaccctcgaaggaatcaagcagttttttgtggctgtggag
agagaagaatggaagtttgacaccttgtgcgatctctatgacacactcacaatcacccag
gctgtcatcttctgtaacaccaagagaaaggtagactggctcacagagaagatgagagaa
gccaacttcacagtttcatctatgcatggggacatgccacagaaggagagagagtccatt
atgaaagagttcagatctggcgcaagccgagtccttatttcaacagatgtttgggctaga
ggcctggatgtgcctcaggtgtccctgatcattaactacgacttacccaataacagagaa
ctctacatacacagaattggccgctcaggcagatatggccgaaaaggtgtggcgatcaac
tttgtgaagaatgatgacattcgcatcctgcgagatatcgagcagtactactccacccag
atagatgagatgcccatgaacgttgctgatcttatctga
DBGET
integrated database retrieval system
