Calonectris borealis (Cory's shearwater): 142081177
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Entry
142081177 CDS
T11211
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04517
IgSF CAM signaling
cbor04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
142081177 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
142081177 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cbor04812
]
142081177 (SPTBN1)
Cytoskeleton proteins [BR:
cbor04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
142081177 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
142081177 (SPTBN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
142081177
NCBI-ProteinID:
XP_075003916
LinkDB
All DBs
Position
3
Genome browser
AA seq
2362 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVAKELETENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQI
LSSDDYGKDLTSVVRLLSKHKAFEDEMSGRSGHFQQAIKEGEDMIAEEHFGSEKIRERIK
DIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEIASYRPTIDSLHEQAKALPQEHAGSPDVQGRLSGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEKWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEINDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLEKIEKEGMQLIAEKPETEAVVKEKLTGLHQMWEELESTTQTKAQRLFDAN
KAELFTQSCADLDKWLNGLESQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEIEELQ
SQARALSQEGKSTDEVDGKRLTVEKKFLELLEPLTERKANLLASKEIHQFNRDVEDEILW
VGERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITESSPNAE
AIQQRLADLQQLWNLLIEETEKRHKRLEESHRAQQYYFDAAEAEAWMSEQELYMMSEEKA
KDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMRQSKVDKLYA
GLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFR
EFARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQIL
AASYELHKFYHDAKEILGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVR
QLQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVR
DLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARK
HYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLS
SREIGQSVDEVEKLIKRHEAFEKSAATWDERFAALERLTTLELLEVRRQQEEEERKRQPP
TPEPSPKVAEDADSQQQWDGTKGEQVSQNGLPSDQESPRVAETAETNEMVNGAAEQRTSS
KESSPVPSPTADRKAKTAIQAQTAATLPAKTQEIPSAQMEGFLHRKHEWETHSKKASSRS
WHNVYCVINNQEMGFYKDSKAAASGIPYHNEIPVSLKEAVCEIAVDYKKKKHVFKLRLTD
GNEYLFQAKDDEEMNTWIQAITSAISSDKIEVSPTTQSTPASSRAQTLPASVTITSESSP
GKREKDKEKDKEKRFSLFGKKK
NT seq
7089 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgacggtagcgacagattatgacaatattgaaatccaacagcagtacagcgat
gtcaacaaccgctgggatgtcgatgactgggacaatgaaaatagttctgctcgactgttt
gaacgatcccgcatcaaggccctagctgatgaacgggaggcagttcagaagaagactttc
acaaaatgggtaaattcccacttggcacgcgtatcatgcagaattacggatttgtacact
gaccttcgcgatggaaggatgctcatcaaacttctggaagttctttcaggagagagactt
cctaaaccaactaagggaaggatgcgcatccattgcctggagaatgttgataaagccctc
cagttcctgaaagagcaaagagtgcacttagaaaacatgggatctcatgatattgtggat
gggaatcacaggctgacacttggccttatttggaccattattctgagattccagatccaa
gatatcagtgttgaaactgaggacaacaaggagaagaaatctgctaaagatgctttgctt
ttgtggtgccagatgaagacagctggttaccccaacgtcaacattcacaactttacaacg
agctggagggacgggatggctttcaatgcactaatacataagcacaggcctgatctgatt
gattttgacaagctgaagaaatcaaatgcacactacaatctgcagaatgcttttaacctt
gcagagcaacaccttggtcttactaagctcctggaccccgaggatatcagtgttgatcat
cctgatgaaaagtcaatcatcacctatgtggtgacatattaccactacttctccaagatg
aaagctttagctgttgaaggaaaacgtattggaaaggtgcttgacaatgccattgaaacg
gagaaaatgattgaaaaatacgaatcgctggcctccgaccttcttgagtggattgagcaa
accattatcatcctcaacaatcgcaaatttgcaaactcgctagttggtgtgcaacagcag
ctacaggcattcaacacttaccgcacagtagagaaaccacccaaatttacagaaaaagga
aacctagaagtgctgctttttaccatccaaagcaaaatgagagccaacaatcagaaagta
tacatgccaagggagggtaaactcatctctgacattaacaaggcctgggaaagactggaa
aaagctgaacatgaaagagaactggcactgcgaaatgagctcatcagacaagagaaactg
gaacaacttgcacgcagatttgatcgcaaggcagctatgagagaaacttggctgagtgaa
aatcaacgtctcgtttctcaggataattttggctttgaccttccagcagtagaggccgca
acaaaaaagcatgaggccattgaaacagacattgcagcatacgaagaacgagtccaggcc
gtggttgcggttgcgaaggagctggagactgaaaattaccatgatatcaaacgcattact
gcgagaaaggacaacgttatacgcctatgggaatatctcctggagctgctcagggcacgg
agacagcggctggagatgaatcttggtctgcaaaagattttccaggaaatgctgtacatt
atggattggatggatgagatgaaggtgcttctgttgtctcaagactatggcaaacatttg
ttaggagttgaagacctgttgcagaaacatgctctcgtggaagctgacattgctattcag
gctgagagagtgagaggggtcaatgcatctgctcagaagtttgccactgatggagaaggt
tacaaaccgtgtgacccgcaagttatcagggaccgcgtcgctcacatggagttctgttac
caagagctatgccagctcgcagccgagcgccgggcccgcttggaggagtcccggcgcctc
tggaagttcttctgggaaatggctgaagaagagggttggatcagggagaaggaacagatc
ctgtcatctgatgactatgggaaggacctaaccagtgtcgtccgtctcttgagtaaacat
aaggcgtttgaagatgaaatgagtggtcgtagtggccactttcagcaggcgataaaagaa
ggtgaagacatgattgcggaggagcattttgggtctgagaaaatcagagaaagaattaag
gatatccgggagcagtgggctaacttggaacagttatctgccattaggaagaagcgtctg
gaggaagcctctctccttcaccagttccaggctgacgctgatgacattgatgcatggatg
ttggacatcctcaaaattgtctccagcaatgatgttggccacgatgaatattccactcag
tccttggtcaagaaacacaaagatgtggctgaagagattgcaagctaccggccaaccatt
gactcgcttcacgaacaagcaaaggctctaccgcaggaacacgccggatctccagatgtg
caaggcagattgtccggaatagaggaaagatacaaagaggttgctgagctgactcggctg
cgtaaacaggccttgcaggatacccttgctctttataaaatgttcagtgaggcagatgct
tgtgagctttggattgacgaaaaggagaagtggctgaataacatgcagattccagagaag
ctggaggacctggaagtgatccagcacagatttgaaagcttagaaccagaaatgaacaat
caggcatcccgtgttgcagtagtgaaccaaatcgctagacagctaatgcacagcggccat
ccaagtgagaaggagatcaaagcacagcaagataaactcaacacaagatggagccagttc
agagaactggtagataggaagaaggatgctctgctctctgctctgagtatccagaactac
catcttgaatgtaatgaaaccaaatcctggatcagggaaaagaccaaagtgatcgaatcc
acgcaagacctgggtaatgatctagctggagtgatggccctgcagaggaagctgaccggc
atggaacgtgacctggtagccattgaagccaagctaagcgacctgcaaaaagaggcagaa
aagttggaatcagagcatcctgaccaggcacaggctatcctttcacggctcgcagaaatc
aacgatgtatgggaagaaatgaagaccaccctcaagaaccgggaagagtcccttggagag
gcaagcaaactgcagcagttcctgagagatctggatgacttccagtcttggctatccaga
acgcagactgcaattgcatccgaagatatgccaaacacactgacagaggctgagaagctg
ctcactcaacatgagaatattaagaatgagatcaacaattatgaggaagattatcagaaa
atgagggacatgggtgagatggtgacgcaagggcaaaccgatgctcagtacatgttctta
cgccagcgcctacaggctttggacactggatggaatgagcttcacaaaatgtgggagaac
aggcaaaatctcctttcccagtctcatgcctaccagctgtttctcagagataccaagcaa
gcagaagcatttcttaataaccaggagtatgttttggcgcacacggaaatgcccactacc
ttggaaggagcagaagctgctattaaaaaacaagaggatttcatgaccacgatggatgcc
aatgaagaaaagatcaatgcagttgtagagactggcaggaggctagttagtgatgggaac
attaactctgataaaatccaggagaaagtggactctattgatgacagacataggaagaac
cgtgaagcagccagtgaacttctgatgagactgaaagataacagggatcttcaaaagttt
cttcaggattgtcaagagctctcactttggatcaatgaaaagatgcttacagcccaggat
atgtcctatgacgaggcaaggaacctgcatagcaaatggctgaagcatcaggcattcatg
gcagaacttgcatccaacaaagaatggctggagaagattgaaaaggagggaatgcagctc
attgcagagaaaccagagactgaagccgtagtgaaagaaaagctgacaggtctccatcaa
atgtgggaagagcttgaatccactacccagaccaaggctcagcgtctctttgatgcaaac
aaggcggagctttttacccagagctgtgctgatttggataagtggctgaatggtttggag
agtcaaattcagtcggacgactacggaaaagatctcaccagtgtcaacatcttattgaag
aagcagcagatgctagagaatcaaatggatgttcgcaagaaggagatagaggagctgcaa
agccaggcaagggctttaagtcaagaagggaagagtacagatgaagtagatggcaaacgc
cttactgtagaaaagaaatttttggagttgttggaacctttgactgaaagaaaggcaaac
cttctggcctccaaagagatccaccagttcaaccgggatgtggaagatgaaattttgtgg
gtcggagagaggatgcctattgctacatctactgatcatggacacaacctccagactgtg
cagctactaataaagaaaaatcagacccttcagaaagaaatccagggacatcagcctcgt
atcgatgacatttttgagaggagtcaaaacattatcacagagagcagccctaatgctgaa
gcaattcagcagagacttgcagacttgcagcagctgtggaacctcctaatcgaggagaca
gagaaacgccacaagcgcctagaggagtctcacagagcgcagcagtattactttgatgct
gccgaggctgaggcctggatgagtgagcaggagctctacatgatgtcagaagagaaagcc
aaggatgaacagagtgcagtgtccatgctgaagaaacaccagattttggaacaagctgta
gaagactatgctgaaactgtgcaccagctttcaaagaccagcagaactttggtggcagat
aatcacccagaaagtgagcgtatcagcatgcgccagtccaaagtggataagctgtatgca
ggcctgaaggatctagctgaagagagacggggcaagctggatgagagacacaggctgttc
cagcttaaccgcgaggtggatgacctggagcaatggattgctgagagggaggtggtggca
ggatcccacgagctgggacaggattacgaacatgtaacaatgctacaggagcgattccga
gaatttgcccgagacactggaaacattggacaggagcgtgttgatactgttaaccacatg
gcagacgaactcatcaactctggacattcagatgccgcgacaattgcagagtggaaggac
ggactcaatgaggcctgggctgatctcctggagctcattgacacgagaacacaaattcta
gcagcctcttatgaactgcacaaattttaccatgatgccaaggagatcttaggacgtatt
caagacaaacacaagaaactgcctgaagagcttggtagagaccaaaacacagtggaaaca
ctacagagaatgcacacaacatttgagcatgatatccaggcgctcggcacccaggtgaga
cagctgcaggaggatgctgcacgccttcaggctgcctatgctggagacaaagctgatgac
atccagaagagggaaaacgaggtcctagaagcatggaaggcgctgttggatgcctgcgag
ggccgcagggttagactggtggatacaggagacaaattccgtttcttcagcatggttcgt
gatctcatgctttggatggaagacgttatccgacagatagaagcccaagaaaagccaagg
gatgtttcgtctgttgaactactaatgaacaatcaccagggtatcaaagcagaaatcgat
gcccgaaatgacagctttactacctgtatcgagctcggcaaatctcttctggcaagaaaa
cactatgcatcagaggagatcaaggaaaagctgctgcagctgacagaaaagagaaaagaa
atgattgacaagtgggaagacagatgggagtggctgagactgattttggaggtacaccag
ttttcaagagatgcaagtgtggctgaggcctggctgctgggacaggagccctacctatcc
agtcgtgaaataggtcaaagtgttgatgaagtggaaaaattaattaagcggcatgaagca
tttgaaaaatctgcagctacttgggatgagagatttgcagcactggaaagactgaccacg
ttggaactgctggaagtacgtcgacaacaagaggaagaggagaggaagagacagccgccc
actccagagccaagcccaaaggttgcagaggatgcagactcccagcagcaatgggatggg
acaaaaggagaacaggtttcccaaaatggtttgccgtcagaccaggaatctccacgggtg
gcagaaactgcagaaacaaatgaaatggtcaatggagctgcagaacagaggacaagttcg
aaagagtctagtcctgttccttctccaacggcagaccgcaaagccaagaccgccattcag
gcccagactgctgctaccctaccagccaaaacacaggagattccttcagctcagatggag
ggcttcttacatcgcaaacatgaatgggagacacacagcaagaaagcctcgagcagatca
tggcataacgtgtactgtgtcataaacaaccaagagatgggcttctacaaggactcgaaa
gctgctgcttctggcatcccctaccacaatgagattcctgtcagcttgaaagaagcagtc
tgtgaaatagcggtcgattataaaaagaaaaagcatgtgttcaagctaagattgactgat
ggcaacgaatacctcttccaagccaaagacgatgaggagatgaacacgtggattcaggcc
atcacatcagctatctcttctgacaaaatcgaagtgtccccgaccacccagagcactcca
gcctccagccgtgcccagaccctgcctgccagcgtcacaataaccagcgagtccagccct
ggcaagcgggagaaagacaaagagaaagacaaagagaaaagattcagcctttttggtaaa
aagaagtga
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integrated database retrieval system
