Calonectris borealis (Cory's shearwater): 142081524
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Entry
142081524 CDS
T11211
Symbol
ARID2
Name
(RefSeq) AT-rich interactive domain-containing protein 2 isoform X1
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
142081524 (ARID2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbor03000
]
142081524 (ARID2)
03021 Transcription machinery [BR:
cbor03021
]
142081524 (ARID2)
03036 Chromosome and associated proteins [BR:
cbor03036
]
142081524 (ARID2)
Transcription factors [BR:
cbor03000
]
Eukaryotic type
Helix-turn-helix
ARID
142081524 (ARID2)
Transcription machinery [BR:
cbor03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
142081524 (ARID2)
Chromosome and associated proteins [BR:
cbor03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
142081524 (ARID2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
TSTD2_N
DUF5532
Motif
Other DBs
NCBI-GeneID:
142081524
NCBI-ProteinID:
XP_075004308
LinkDB
All DBs
Position
1:34723738..34830472
Genome browser
AA seq
1834 aa
AA seq
DB search
MANSTGKNHADQRRKGLAFLDELRQFHHSRGSPFKKIPVVGGKELDLHALYTRVTTLGGF
GKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEEDDEVQPGNPKP
QLPIGAIPTSYNYQQHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSAVFGEEWKEKTDRDFVKFWKDI
VEDIEVRDLISDRSKSQDIPSEEWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEE
GNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFKTTHLMFHTVT
KCLMSRDRFLKMRGMEILANLCKAEDNGVLICEYVDQESYKEIICHLTLPDVLLVISALE
VLYMLTEMGEVACSKIAKVEKSIDTLVCLVSMDIQMFGPDALTAVKLIEHQCVSQQGVPD
VRPQVMDHGSSQAHATGVPASRTAPHVAPPPGIVEIDSEKFACQWLNAHFEVNLDCSVSR
AEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVEDPSNNGQAHIHVVGVKRR
AIPLPIQMYYQQQPTSSTPVVRVDSIPDVSSSPSPAGIPHGLPSVGNHYQRTPINQSSTL
TATQMSFPIQGVHTVAQTVSRIPQNPSVHTQQQQNAPVTVIQNKGPISCEVVKATVIQSS
VPQSAVPVTIAVGGAPQASNQTHSTTGPQPSVTVVSSQTLLHHQPVIQQQSPLHAVVPGQ
IPSGTPVTVIQQAVPQGHIFGRVQNIPACSSAVSQGQQLISTSSQPGQTSSQQSSAGNQQ
QDTVIIAPQQYVTTSASNIVSATTVQNFQVAAGQVVTIAGVQNPPTSRVGFQNIAPKPLP
SQQVPPAVVQQPMQPQQQPPPPSQQSVVIVSQPTQQGQTYAPAIHQIVLANPASIPTGQT
VQLTGQPSITPSSSPSPGPVTNNQVPTVMSSSSTTPQSQGPPPTVSQMLSVKRQQQQQHS
PASSQQQVQVQQPIQMQVQSQQANTGVGQPNSGESSLIKQLLLPKRGPSTPGGKLILPAP
QIPPPNNARAPSPQVVYQMANNQAPGFGVQGQSPAQQLLVGQQNVQLVPGAIQPQGAVQT
VPISNLQILPGQLISNSPATIFQGTAGNQVTITVVPNTSFATATVSQGNATQIIAPAGIA
VSGAQTGVGLQVQTLPATQAPSAGQSPCTAAPPFKGDKIICQKEEEAKEATGLHIHERKI
EVMENPSCRRGAANTSNGDAKENEMQVGSLLNGRKYSDSSLPPSNSGKTQNEANQCSQVS
NGPSLEMGENGAPGKQNFEQMDTEEIKSDLKKPLVNGICDFDKGDGSHLSKNIPNHKTSN
HVGNGEISSVEQQGNLDATQQDTAKGDQGERISNGPVLTLSSSPVVSGTQEAAKLLTQQL
SGTNTDLPNGPLASSLNSDVPQQRPSVVVSPQSTASVIQGHQIIAVPHSGPRVSQSTLSS
EVRSTNGTAECKTVKRPAEDNDRETVPGIPNKVGVRIVTISDPNNAGCSATMVAVPAGAD
PSTVAKVAIESAVQQKQQHPTTYIQSMVTQSTPATSIPTVQVQGQQINLQPPSYTAASQH
AEQMKKPGQNFMCLWQSCKKWFQTPSQVFYHAATEHGGKDVYPGQCLWEGCEPFQRQRFS
FITHLQDKHCSRDALLAGLKQDEHGQAGNQKPSNKQPAAGGTASTPRAQKAIVNHPSAAL
MALRRGSRNLVFRDFTDEKEGPITKHIRLTAALILKNIGKYSECGRRLLKRHENHLSVLA
ISNMEASSTLAKCLYELNFTVQSKEHEKDSEMLQ
NT seq
5505 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattcgacgggtaaaaaccacgcagaccagcggagaaagggactcgctttcctg
gacgagctgcggcagtttcaccacagcagagggtctccttttaagaagatccccgtggtg
ggtgggaaggagctggatcttcacgctctctacaccagagtcaccactttaggcggattt
gggaaggtatcagagaagaatcagtggggagaaattgtagaggagtttaactttcccaga
agttgttctaacgctgccttcgctttaaaacagtattacttgcgttatctagaaaagtat
gaaaaagtccatcattttggggaggaggatgatgaggtacaaccaggcaatccaaagcca
caacttcctattggtgcaattccaacttcctataactaccagcaacacagtgtgtcagat
taccttcgtcaaagctatgggctgtctatggactttaactcaccaaatgactataataaa
ttggtgctttcactgttatctggactcccaaatgaagtggactttgcaattaatgtatgt
actcttctttcaaatgaaagcaagcatgttatgcagcttgaaaaggaccctaaaatcatc
actttactgcttgcaaatgctggggtgtttgatgacactttaggatcattttctgctgta
tttggagaagaatggaaggagaaaactgatagagattttgttaagttttggaaggatatt
gttgaggatattgaagttcgtgatctaatttctgacagaagcaaatctcaagatattcca
tcggaagaatggatttgggaatccttatttcatccacctcgcaaattgggcattaatgat
attgaagggcagcgggtacttcaaatcgcagtgattttacgtaatctttcttttgaagag
ggaaatgttaaacttttggcagctaatcgtacttgtcttcggttcctgctactctctgct
catagtcattttatttctctacggcagttggggcttgacacgctgggaaatattgcagca
gagcttcttttggatcctgttgatttcaaaactactcatctaatgtttcacactgttaca
aaatgcctcatgtcaagggatagatttttaaaaatgagaggcatggaaatcttggcaaat
ctttgtaaggctgaagataatggtgtcttaatttgtgaatatgtggatcaagaatcctat
aaagagatcatatgtcatctcacgctaccagatgtgctgcttgtaatctcagcacttgag
gtgctatacatgctcacagaaatgggagaagtggcctgctcaaagattgctaaagtagag
aagagcatagatacattagtatgtctggtttctatggacatccagatgtttggacctgat
gcacttactgctgtaaaactcattgaacatcagtgcgttagccagcaaggagtacctgat
gtcagaccacaagtaatggatcatggttcttcacaggcccatgcaacaggtgtcccagcc
tccaggacagcaccacatgttgctccaccaccgggaatagtagaaatagacagcgagaaa
tttgcatgtcagtggttgaatgcacattttgaggtgaatcttgattgctcagtctctcga
gcagaaatgtactctgaatacctctctacctgtagtaaattagctcgaggtggaatcctg
acatcaactggattttataaatgtctgcgaactgtctttccaaatcatacagtgaagaga
gtagaagatccaagtaacaatggtcaagcacatatacacgtggtaggagtgaaaaggaga
gctataccacttcccattcagatgtactatcagcagcagccaacttcgtctaccccagtt
gtccgggttgattcaattcctgatgtgtcttcgtctccttcgccagcaggaatcccgcat
gggctaccaagcgtaggaaatcactatcagaggacccctattaaccagtcttcaactttg
acagcaacacagatgtcttttccaattcaaggtgttcacactgtggcacagactgtttct
agaattccacaaaatccttctgttcatacacagcagcaacaaaatgctccagtgactgtt
atacagaataaaggtccaatatcctgtgaagtagtgaaggccacagtaatacagagctct
gttccccagtctgcagttcctgttactattgctgtaggaggagcaccacaagcttctaat
caaactcacagcactacaggaccacagccgtctgttactgttgttagttctcagacgttg
cttcaccaccaacctgtaattcaacaacagtctccactgcatgcagtggtaccaggacag
ataccttcaggcactcctgttacggtaattcagcaagctgtacctcagggtcatatattt
ggcagagtacaaaacataccagcatgcagttcagcagtttcacagggtcaacagctaatc
agcacatcatcacaacctgggcagacatcatctcagcagtcctctgctggcaaccagcaa
caagatacagtcatcatagcaccacagcagtacgtcacaacctctgcatctaacattgtt
tctgccaccacagttcaaaatttccaagtagcagctgggcaggtggttacaatcgcaggt
gtccaaaacccaccaacatctagggtagggtttcagaatattgcaccaaagcctctgcca
tctcagcaagttccacctgccgtggtacagcagccaatgcagccacagcagcagcctcca
ccaccatcccagcaaagtgtagtgattgtaagccagccaactcagcaaggtcaaacgtat
gcaccagccattcatcaaatagtgcttgctaatccagcttctattcccactggtcaaact
gtccagttgactggacagccaagcattactccatcttcttcaccatccccaggtccggtt
acaaataatcaagtccctacagttatgtcatcttcatctaccacgcctcagtcacaagga
ccccctcctactgtcagccagatgctttctgtaaagaggcagcagcagcagcaacattca
ccagcatcatcgcagcagcaggtacaggtacaacaaccgatacaaatgcaagttcagtca
caacaagctaatacaggagttggccagcctaattctggtgagtctagtctgataaaacaa
ctgcttcttccgaaaagaggcccctcaactccaggggggaagcttatactcccagctcca
cagattcctccacctaacaatgcaagagctcctagccctcaggtggtttatcagatggcc
aataaccaggcaccaggttttggagttcaaggacagtctccagctcagcagctgctagtt
ggacagcaaaatgttcagctggtcccaggtgcaatccagccccaaggggcagtacaaaca
gtacccatttctaatttacagatattgccaggccagttgatctcaaacagcccagcaact
attttccaagggactgctggcaaccaggttacgataacagttgtgccaaatacgagtttt
gctactgcaactgtgagtcagggaaatgcaactcaaatcattgctccagcaggaattgca
gtgagtggagcacagacaggagttgggctacaggtgcaaacacttccagctactcaagca
ccttcagctggacaatcaccgtgtactgctgctcccccattcaaaggtgataaaataatt
tgccaaaaggaggaagaagcaaaggaagcaacaggtttacacattcatgaacgtaaaatt
gaagttatggagaatccttcctgccgaagaggagctgcaaacaccagcaatggggatgca
aaagaaaatgaaatgcaggtgggaagtcttttaaatgggagaaagtatagtgactccagt
ctacctccttctaactcagggaaaactcagaatgaggccaatcagtgctcacaagtcagt
aatgggccatcattagaaatgggtgagaacggagctcctggaaagcagaactttgaacaa
atggacacagaggaaattaaaagtgatttgaagaagcccctagttaatggaatctgtgat
tttgataaaggagatggttctcatttgagcaaaaacattccaaatcacaaaacttccaat
catgtaggaaatggtgagatatcttcagtggaacaacaagggaatttggatgctacgcag
caagatactgccaaaggtgatcaaggggaaagaatttctaatgggcctgtattaactttg
agtagttcacctgttgtaagcggtacacaggaggctgcaaaactgttaacccagcaactt
agtggtaccaacactgatttacctaatggacctctagcttcaagtttgaattcagatgtg
cctcagcaacgcccaagtgtagttgtctcaccacaatctacagcctctgttatacagggg
catcaaatcatagcagttccacactcaggacctagagtgtcccagtctaccctgtcatcc
gaagttcggtctactaatggcacagcagaatgcaaaactgtaaagaggccagcagaggat
aatgacagggaaactgttccaggaattccaaataaagtaggagttagaattgttacaatc
agtgaccccaacaatgctggttgcagtgcaactatggttgctgtgccagctggagcggat
ccaagcactgtagcgaaagtagcaatagaaagtgctgttcaacaaaagcagcagcatcca
actacgtatatacaaagcatggtcacacagagcacacctgcaacgtcgataccaacagtg
caagtacagggccagcagatcaatttgcagccgccttcatacactgcagcaagtcagcat
gcagagcaaatgaaaaaacctggacagaacttcatgtgtctgtggcaatcttgtaaaaag
tggtttcaaacaccatcacaagttttctatcatgcagcaactgaacatggaggaaaagat
gtctacccagggcagtgcttatgggagggatgtgaacctttccagcggcagaggttttcg
ttcattacccatttacaggataagcactgttccagagatgctttgcttgcaggattaaag
caagatgaacatggacaagcaggaaatcagaagccttccaataagcagccagctgcaggg
ggtactgcctctactcccagagcacagaaggccattgtgaatcatccgagtgctgcccta
atggcattaaggaggggatcgagaaaccttgtcttcagagatttcacagatgaaaaagag
ggaccaataactaaacacatccgattaacagctgccttaatattaaaaaatattggtaaa
tattcagaatgtggtcgcagattgctaaaaagacatgaaaatcatctatcagtgctagcc
attagtaatatggaagcttcctccacacttgccaaatgcctttatgaacttaattttact
gtccagagtaaagaacatgaaaaagactctgagatgctgcagtga
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integrated database retrieval system
