Calonectris borealis (Cory's shearwater): 142081576
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Entry
142081576 CDS
T11211
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04140
Autophagy - animal
cbor04148
Efferocytosis
cbor05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
142081576 (VPS16)
04148 Efferocytosis
142081576 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
142081576 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbor04131
]
142081576 (VPS16)
Membrane trafficking [BR:
cbor04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
142081576 (VPS16)
Hops complex
142081576 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
142081576
NCBI-ProteinID:
XP_075004378
LinkDB
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Position
4:complement(505200..515355)
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AA seq
838 aa
AA seq
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MDCYTANWNPLGEEAFYRKFELYAMEWSLKEDLRDCLVAAAPYGGPIALLKNNARREKSP
SARPLLEIYSASGLLLAGIPWKSGQLVQLGWTASEDLLCIQEDGTVLIYNLFCEFKRHFS
MGNEVLQNHVLEAKVFHTEYGTGVAILTGAHRFSLTTNIDDLKLRRMPEVPGLQKPPSCW
AVLSQDRVTIVLLAVGQDLYLLDNTSCSVVTPPGMSPSAGAYLQMAVSFNYRCLALFTDT
GYIWMGLATLKEKLCEFNSSIRSPPKQMVWCMRPRSRQRAVVVAWDRQLMVAGNSSECIQ
FVLDEDSYLVPELDGVRILSRTSHEFLHEIPEVSQEIFKIASMAPGALLLEAQKEYEKES
QKADEYLREIKDQKLLPEAVSQCIEAAGYEHEPDTQKSLLRAASFGKCFLDKFPPESFVR
MCQDLRVLNAIRDYQIGIPLTFTQYKRLTIEVLLDRLVLRRLYPLAIRICEYLRLSEIQG
VSRILAHWACYKVQQKDKSDEEVAHAINQKLGDTPGISYSEIAARAYDCGRTELAIKLLE
YEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVYTVVLHLKNELNRGTFFMTLQNQPVA
LSLYRQFCKHQERETLKDLYNQDDNHQELGNFHVHSSYSEKRIEGRVGALQNALDEYYKA
KNEFAAKATEDQIKLLRLQRHLQEDFDKPYLDLSLHDTVSNLILDGHHKRAEQLYREFKI
PDKRYWWLKISALANRGDWEEMEKFSKSKKSPIGYLPFVEISVKHHNRYEAKKYAPRVTP
EQRVKAFVLVGDLDQAADAAIEHKNETEMNFVLSKCTASTDAAVVEKLNRARAQLLKK
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggactgttacacggccaactggaacccgctgggcgaggaggccttctaccggaagttc
gagctgtacgccatggagtggagcctgaaggaggacctgcgggactgcctggtggcagcc
gccccgtacggggggcccatagctctgctgaagaacaacgcccggagggagaaatccccc
agcgcccgcccgctgctggagatctactcggcctcagggcttctcctggccggcatcccg
tggaagagcgggcagctggtgcagctgggctggacggccagcgaggacctgctgtgcatc
caggaggacggcaccgttctcatctacaacctcttctgcgagttcaagcgccacttcagc
atgggcaacgaggtgctgcagaatcacgtgctggaggcgaaggtcttccatacggagtat
ggcaccggcgtggccatcctcaccggggcacaccgcttctccctgaccaccaacatcgac
gacctgaagctgcgcaggatgcccgaggttcccggtctgcagaagccaccctcctgctgg
gccgtgctgtcccaggacagagtcaccatcgtcctgctggcggtcggacaggacctctac
ctcctggacaacacctcctgctccgtggtgaccccccctggcatgagcccctccgccggc
gcctatctgcagatggccgtgtccttcaactaccgctgcctggcgctcttcaccgacacc
ggctacatctggatggggctggccacgctgaaggagaagctctgcgagttcaacagcagc
atccgatctccgcccaagcagatggtttggtgcatgcgtccccgcagccggcagcgtgcc
gtggtggtggcctgggaccggcagctgatggtggcggggaactcctcggagtgcatccag
tttgtcctggatgaggactcctacctggtgccggagctggacggggttcgcatcttgtct
cgcacctcccacgagttcctgcacgagatcccagaggtcagccaggagatcttcaagatc
gcctccatggccccaggggcgctcctgctggaggcacagaaggagtacgagaaggagagc
cagaaggcagacgagtacctgcgggagatcaaggaccagaagctgctcccggaggcggtg
agccagtgcatcgaggcagccggctacgagcacgagccggacacccagaagtcgctgctg
agggcagcctccttcgggaagtgcttcctcgacaagttccccccggagagcttcgtgcgc
atgtgccaggacctgcgggtgctcaacgccatccgggactaccagatcggcatccccctc
accttcacccaatacaagcggctcaccatcgaggtcctgctggacaggctggtcctgcgg
cggctctaccccctggccatcaggatctgcgagtacctgcgcctctcggagatccagggc
gtcagccgcatcctggcccactgggcctgctacaaggtgcagcagaaggacaagtccgac
gaggaggtggcccacgccatcaaccagaagctgggtgacacgccgggcatctcctactca
gagatcgctgcccgggcttacgactgcggcaggacggagctggccatcaagctgctggag
tatgagccgcgctccggggagcaggtcccgctgctgctgaagatgaagcggagcaagctg
gccctcagcaaagccatcgagagcggggacacggacctggtctacaccgtcgtgctccac
ctgaagaacgagctgaatcgtggcaccttcttcatgacgctgcagaaccagccggtggcc
ctgagcctgtaccgccagttctgcaagcaccaggagcgggagacgctgaaggacctgtat
aaccaggacgacaatcaccaggagctcggcaacttccacgtccactccagctactcggag
aagcgcatcgaagggcgagtaggagctctgcagaacgccctggacgagtactacaaagcc
aagaacgagtttgctgccaaggctacagaggatcagatcaagctcctgcggctccagcga
cacctccaggaggactttgacaagccctatctcgacctctcgctgcatgacaccgtctcc
aacctcatcctggacggccaccacaagcgagccgagcagctctaccgggagttcaagatc
cctgacaagaggtactggtggctgaagatcagtgccctggccaaccgtggggactgggag
gagatggagaagttctccaagagcaagaaatcacccattgggtacctgcccttcgtggag
atctcggtgaagcaccacaaccgctacgaggccaagaagtacgcgccccgcgtgaccccc
gagcagcgcgtcaaggccttcgtcctggtgggggacctggaccaggcggccgacgctgcc
atcgagcacaagaacgagacggagatgaactttgtcctgtccaagtgcaccgccagcacc
gacgccgccgtggtggagaagctgaaccgggcccgagcccagctcctgaagaagtga
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integrated database retrieval system
