Calonectris borealis (Cory's shearwater): 142081651
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Entry
142081651 CDS
T11211
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
142081651 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbor03021
]
142081651 (POLR1A)
Enzymes [BR:
cbor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
142081651 (POLR1A)
Transcription machinery [BR:
cbor03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
142081651 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Pox_C7_F8A
HMG_box
Motif
Other DBs
NCBI-GeneID:
142081651
NCBI-ProteinID:
XP_075004572
LinkDB
All DBs
Position
4:7012370..7048778
Genome browser
AA seq
1708 aa
AA seq
DB search
MRPPKVVPWRRLVGVSFGMYTAEEIRKLSVKPITNPQYLDNVGNPAINGLYDLALGPPDS
KEVCATCMQNFSNCPGHFGHIELPLTVYNPLFFDKLYLLIRGSCLNCHMLTCTRAVVHLL
LSQLKVLEKGLLHAVHDLEVILNRFLEQCADATGSEIEEELNHHVHEILQSHQIRDQCSN
VKNVCECRNKLIAQFWKAHMSSKKCPNCKSRRSLVRKEHNSKLTVTYPSTVYHKSGEEGI
LDEPAAIDESQLGKRGYLTPMTAKEYILALWKNEGFFLRYLFPGIDPHESLGFSPDMFFL
DLLVVPPSRYRPINRVGDRLFTNGQTVNLQAVMKDAKMIRKLLVFMAKEQCQPIKIAEEE
IQTETGENNEPLDHSVLTMIPGQTIADKLYNAWIRLQSHVNIVFDSDMDKLMTEKYPGIR
QLLEKKEGLFRKHMMGKRVDFAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVK
ELRQAVINGPKVHPGASMVINEDGSRTVLSASSLTQREAIAKQLLTPSSGAPQSGLKIVC
RHIKNGDVLLLNRQPTLHRPSIQAHRARILPGEKVLRLHYANCKAYNADFDGDEMNAHFP
QSELGRAEAYTLAFTDEQYLVPKDGKPLPGLIQDHMVSGVSMTIRGCFFTREQYMELVYR
GLTDKKGRIKIFPPAIMKPQRLWTGKQVVSTLLINIIPENHVPLNLTGKAKIGGRAWVKG
PANRCLNLDSMCESQVIIRNGELLCGVLDKAHFGSSAYGLVHCCYEIYGGKTSGKVLTCL
GRLFTAYLQLYRGFTMGIEDILVKPEADHKRQKIIEKSSQHGIEAVRAALNLPETASCEE
VQGKWQDAHLCKDQRDFNMVDLKFKEEVNNYNNEVNKVCMPLGLHRSFPENNLQLMVQSG
AKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFQPYDFSPSSGGFVTGRFLTGIKP
SEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYGE
DGLDIPKTQFLQPEQFPFIAENYEVIQKTNHLDEALARMESHQANQQFKAIKKWRARHQN
SVRREGGFLMFSQKKMASVKAQIPGGEIKNGRDPATLQLLKMWYELDEKKRRKYLKKTNK
CPDPSLGVWRPDTYFASVSETFENGVIDYINKWESESRRSYMHSALSSDRLKDLLYLKWQ
RSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIKT
PTMSVPVFNTKKALKKVKQLKKQLTRVCVAEVLQKVEIEESLHVKSKQNKHRLYKIKFHF
LPHEYYREEKCVKPRDILHFMETRFFKIFLEAIKRKNAKMASFTEVSTRKATRKDLDGDQ
DKTQNNEEAPAEEEENIVDAEADEGDGDATEAKRRKNQEEEVDYESEEENGEENIDENLE
DEEAESEKEERTPGAEDQIGADGDESQHLSFMSRTKKEKDRLLQSAELRVNAVLDSHPSI
QDYTFDTENELWCEVSLTLPLMKVYFDLSSLLVALARSTVIHEVKGITRCLLNESTNKQG
EKELVLHTEGINLAELFRYSDILDLNRLYSNDIHAMAKNYGIESALRVIIKEIKDVFAVY
GIVVDPRHLSLVADYMCFEGFYKPLNRFGIQSNSSPLQQMTFETSYKFLKEATMMGAHDE
LRSPSACLVVGKVVKGGTGLFDLKQPLT
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atgaggccgccgaaagtggtgccgtggcggcggctggttggggtctccttcgggatgtac
acggccgaggagatcaggaaactgagtgtaaaacccataacaaatcctcagtatttggat
aatgtggggaatccagccattaatggactgtacgacttggctttgggacctccagactcc
aaagaagtgtgtgcaacttgcatgcagaacttcagcaactgccctggtcattttggccat
atagaactgcctctgactgtctacaaccccctgttttttgataaattataccttctaatt
cgaggttcttgtttaaattgtcacatgctgacatgtactcgagctgtggttcacttgctg
ctaagtcagctgaaggttctggagaaagggttgcttcatgctgtccatgatcttgaagtc
attctgaacaggtttttagagcaatgtgcagatgcaacaggttcagaaattgaagaagag
ttaaatcaccatgttcatgaaatattacaaagtcatcaaataagagatcagtgttcaaat
gtaaaaaatgtatgtgagtgtagaaataaactgatagcacagttctggaaagcgcatatg
agttcaaagaaatgcccgaactgcaaatcaaggagatcactagtgcgaaaagagcataac
agcaaactgacagtaacctatccttctacagtgtaccataagtcaggggaggaaggcatc
ctggatgagccagcagctattgatgaaagccagttagggaagagaggatacctgacaccg
atgactgccaaggaatacatcctggctctgtggaagaatgaaggtttctttttgcgttac
cttttccctgggatcgatccccatgagagtttgggattcagtccagacatgttcttttta
gatctacttgtggttccgccttcaaggtatcgtcccataaatcgtgttggagaccgactg
tttacaaatggtcagacagtgaacttgcaggctgtcatgaaagatgccaaaatgatacgg
aagctcttggttttcatggcaaaagaacaatgtcagccaataaaaattgcagaagaagaa
atccaaacagagacaggagagaataatgaacctctggaccattctgtcctgacaatgatt
ccaggacagaccattgcagataagctgtacaacgcttggattcgtcttcagagccatgtc
aacattgtatttgatagtgacatggacaaactaatgacagaaaaataccctggtattcgt
cagctattagagaaaaaggaaggactgttccgcaagcacatgatgggcaagcgtgtggat
tttgctgctcgatcagtcatttgccccgatatgtacattggtaccaatgagattggcatt
cctatggtatttgctaccaaactgacttaccctcagccagtcactccctggaatgtcaaa
gagctgcggcaggctgtcataaacggcccaaaggttcaccctggggcctccatggtcatt
aacgaagatggatctcgaacagtgttgagcgcaagcagtctgacccagagggaagccata
gctaagcagctcctcactccttcttcaggtgcaccccagtcaggactgaagattgtatgt
cgacatattaaaaatggagatgtccttttactgaaccgtcagcccactcttcatagaccc
tccatccaagctcaccgggcccgaatcctgcctggagaaaaagtgctgaggcttcactat
gccaactgcaaagcttacaatgctgattttgacggtgatgaaatgaatgcccattttcca
cagagcgagctgggtagagcagaagcctacaccttagcctttactgatgaacagtatctg
gttccaaaggatgggaagccacttcctggcttgatccaggatcacatggtttctggagtc
agcatgacaatccggggctgctttttcaccagagagcaatatatggagcttgtttaccga
ggactaacagacaaaaaaggcagaattaaaatctttcctcctgccattatgaaaccacag
cgactatggacaggaaagcaggttgtttctacattgttaataaacatcattccagaaaac
cacgtcccactgaatttgactgggaaagctaagatcggtggaagagcctgggtaaaggga
cctgcaaacaggtgtctaaatcttgattcaatgtgtgaatctcaggttattattagaaat
ggggaattactgtgtggagtcttggacaaagctcactttggcagctctgcctatggtctg
gtccactgttgctatgaaatctatgggggtaaaaccagtgggaaagtgctaacgtgtcta
ggacgtctctttactgcttatttgcagctgtacaggggatttacgatggggattgaagat
attttggttaaacctgaagcagaccacaaaagacaaaaaatcattgaaaagtcaagccag
catggtattgaagctgttagagctgctcttaatttgccagaaactgcatcatgtgaggag
gtccaagggaaatggcaggatgcccatctctgcaaagaccagagggattttaacatggtt
gatctgaaattcaaggaggaagtaaacaattacaacaacgaagttaacaaggtttgtatg
ccccttggtctccacaggagctttccagagaacaatttgcagttgatggtacagtcagga
gccaaaggatccactgtaaatacaatgcagatttcttgtttgctgggccagattgagttg
gaaggtcgaagacccccactgatggcatctggcaaatcactgccatgtttccagccttat
gatttttcccctagctcaggaggatttgtgactggcagatttctcaccgggatcaaacct
tctgaattcttctttcactgcatggctggcagggaaggtctcgtggatacagctgtcaaa
accagccgttctgggtacctacaaaggtgtatcataaaacatttggaaggactggtagtt
cagtatgacctgactgtacgagatagtgacggcagtgtggtgcagtttctgtatggagaa
gatgggcttgatatccctaaaactcagttcttgcaacctgagcagtttcctttcattgca
gaaaactatgaggtaatccagaagacaaaccatctggatgaagctttagcaaggatggag
tctcaccaagctaaccagcagttcaaagccatcaaaaagtggcgagccaggcatcaaaac
tctgtgcgaagagaaggaggttttctgatgttttcccaaaagaaaatggcaagtgtaaaa
gcacagattccaggaggagaaatcaaaaatggaagagatcctgctactttgcagttattg
aagatgtggtatgaactagatgagaagaaacgaagaaagtatctgaagaagacaaataag
tgtcctgacccaagccttggtgtctggcgtccagatacatactttgcgtctgtttcagaa
acatttgaaaatggagtcatagattatatcaacaaatgggaatctgagagcagacgaagt
tatatgcactcagcactttcttctgacagattaaaggatttgttgtacttgaagtggcag
cgatctctttgtgacccaggagaagctgtgggtcttcttgcagctcagagtattggggaa
ccttccacacagatgactctgaacacctttcactttgctggcagaggtgaaatgaatgtc
accttgggtattccaaggttgcgggaaatattgatggtagccagtgcaaatattaaaacg
ccaacgatgagtgttcctgtgttcaataccaagaaagctctcaagaaggtgaaacaactt
aagaaacagctcacaagagtgtgtgtagctgaggtcttgcagaaagttgagatagaggaa
tccctgcatgtgaagtccaagcagaacaaacatcgtctctacaaaatcaaattccatttc
ttgccccatgagtattaccgagaggagaagtgtgtgaagcccagggacatcttgcacttc
atggaaacaaggttctttaaaatttttctggaagcaattaaaaggaagaatgcaaagatg
gcatcttttactgaagtcagcacccggaaggcaactcggaaagatttagatggtgaccaa
gacaagacacagaataatgaggaagctccagcagaggaagaagagaacattgttgacgca
gaagctgatgaaggggatggtgatgccacagaagcaaaacggaggaagaaccaagaagaa
gaggttgattatgagagcgaagaagagaatggggaagaaaacattgatgagaatctagaa
gatgaagaggctgaatcggaaaaagaagaaaggactcctggtgcagaagatcagattgga
gcagatggtgatgaatctcaacatctttcctttatgtctcggactaaaaaagagaaagat
cgattacttcagtcagcagagttgcgagtaaatgctgttctggacagccatccatcaata
caggattacacgttcgacaccgaaaatgaactttggtgtgaggtttcattgacacttcca
ttgatgaaggtgtactttgatctctcctccttgcttgtcgctcttgcacgaagcacagtc
attcatgaagtgaagggcatcacacggtgcttgttgaatgaaagtaccaataagcaagga
gagaaggaactcgttctgcataccgaaggcataaacctggcggagctgttcagatactct
gatattttggacctgaacagactttattccaatgatattcatgccatggctaagaattat
ggaattgagtctgccctgagggtgattataaaggaaataaaagatgtatttgctgtatat
ggaattgtggtagaccctcggcacctttcacttgtggcagattacatgtgttttgaagga
ttttataaaccgctgaatcgttttggaattcagtccaactcctcccctctgcaacagatg
acatttgaaaccagctacaaattcttgaaggaagcaacaatgatgggtgcccatgatgaa
ctgcgatccccttctgcatgcctggtcgttggaaaagttgttaaaggagggactggtttg
tttgacctcaagcaacccctcacatag
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integrated database retrieval system
