Calonectris borealis (Cory's shearwater): 142081847
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Entry
142081847 CDS
T11211
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
142081847 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbor03019
]
142081847 (FIP1L1)
Messenger RNA biogenesis [BR:
cbor03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
142081847 (FIP1L1)
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GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
142081847
NCBI-ProteinID:
XP_075005185
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Position
4:30925241..30969229
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AA seq
583 aa
AA seq
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MSTGEVERLSTDLGGAAGDEEEEWLYGDENEAERPEEEKASAPPPPGNEEEAAENGVVKT
KVAEAEDDSDSDSDDDEDDVQVTIGDIKTGAPQYSYGAAPVNLNIKTGGRAYGSSGAKVK
GVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYCEKQKRIRM
GLEILPVTSTTNKITAEDNAMEVRPSAEILDGRYHLFKVQQGRTGNLEKELAVQSTKADF
TSPPALFKSGIPTNRRLSGTIDVIGQTITISRVEGRRRANENSNIQVLSERSNPEVDNFT
KPPPFFPPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGIPITVPPPGFPPPPGGPPPSLI
PTIESGHSSGYDGRSVRAFSYGSDNEVELKTNDLLKAMLSLASKADKQKVGSPLYFTFPH
LAGSAPSWSSLMDTSKQWDYYARREKDRERERERSRDRDRDRERDRDRERTRDRERDRDH
SPTPSVFNSDEERYRYRDYAERGYDRHRTSREKEDRHRDRRHREKEETRHKSSRSNSRRR
HDSEEGDSHRRHKHKKSKRSKEGKEASGEPAPEQENTEAAPVE
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccggcgaggtggagcggctgtcgacggacctcggcggagccgccggggacgag
gaggaggagtggctctacggcgatgaaaatgaagcagagagaccagaggaagaaaaagcc
agtgctccacccccacctggaaatgaagaggaagctgcagaaaatggcgttgtgaaaacg
aaggtggcagaggctgaggatgacagtgatagtgatagtgatgatgatgaagatgatgtt
caagtcaccataggggatattaaaacaggagctccacagtatagttacggagcggcacct
gtgaatctcaatattaagacaggagggcgagcttatggatcttctggtgcaaaagttaaa
ggggtggatctagatgcaccagggagtattaatggtgtgccacttctggaagtagattta
gattcttttgaagataaaccttggagaaagccaggggctgatctctctgattatttcaat
tatgggttcaatgaagatacctggaaagcttactgtgaaaaacaaaagagaatacgaatg
ggtcttgaaattttaccagttacctcaaccacaaataaaattacggctgaagacaatgct
atggaagtaagaccaagtgcagagattctcgatggcagataccatctttttaaggtacag
cagggcagaactggaaatttggagaaagagttggcagtgcagtcgaccaaagctgatttc
acatctcctcctgccttattcaaatcaggaattccaacaaacaggcgattatctggcaca
atagatgtgattggacagaccatcactatcagcagggtggaaggacgaaggcgtgctaat
gaaaacagcaacatacaggttctttcagaacgatctaatcctgaagtagacaattttacc
aagccacctccatttttccctccaggagctccacctacccaccttccaccacctcctttt
ctcccaccccccccaactgtcagtactgctccacctttgattcccccaccaggtatacca
ataacagtgccaccaccaggctttccaccaccacctggcggtcctccaccttccctcata
cccacaatagaaagtggacattcttctggctatgatggtcgttctgttcgtgcattttca
tatggcagtgataatgaagtggaactcaaaacaaacgatttattgaaggctatgttatca
ttggctagcaaagcagataagcagaaagtgggaagtcctctgtacttcacctttccgcac
cttgcaggttctgctccttcatggtctagtcttatggacaccagcaaacagtgggattac
tatgcacgaagagagaaggatagggaacgtgagagagagcggtcccgagatcgggatcgc
gaccgggagcgagacagagatcgagaacgtaccagagacagggaaagggaccgagatcac
agtccaactccaagtgtgttcaacagtgatgaagaacgatacagatacagagactatgca
gaaagaggctatgaccgccatagaacaagtagagagaaagaagaccgacacagagacagg
agacatagagagaaagaagagactagacacaagtcatctcgaagtaacagcagacgccgt
cacgacagtgaagaaggggacagccacagaaggcacaaacacaaaaagtccaaaagaagc
aaagaaggaaaagaagccagtggtgaacctgctcctgaacaggaaaacactgaagctgcc
cctgtggaatag
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