Calonectris borealis (Cory's shearwater): 142081849
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Entry
142081849 CDS
T11211
Symbol
PDGFRA
Name
(RefSeq) platelet-derived growth factor receptor alpha
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04010
MAPK signaling pathway
cbor04020
Calcium signaling pathway
cbor04144
Endocytosis
cbor04510
Focal adhesion
cbor04540
Gap junction
cbor04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
142081849 (PDGFRA)
04020 Calcium signaling pathway
142081849 (PDGFRA)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
142081849 (PDGFRA)
09144 Cellular community - eukaryotes
04510 Focal adhesion
142081849 (PDGFRA)
04540 Gap junction
142081849 (PDGFRA)
09142 Cell motility
04810 Regulation of actin cytoskeleton
142081849 (PDGFRA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cbor01001
]
142081849 (PDGFRA)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cbor04090
]
142081849 (PDGFRA)
Enzymes [BR:
cbor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
142081849 (PDGFRA)
Protein kinases [BR:
cbor01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
142081849 (PDGFRA)
CD molecules [BR:
cbor04090
]
Proteins
142081849 (PDGFRA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR1-3_N_Ig-like
VEGFR-1-like_Ig-like
V-set
Ig_6
Motif
Other DBs
NCBI-GeneID:
142081849
NCBI-ProteinID:
XP_075005200
LinkDB
All DBs
Position
4:31299782..31335725
Genome browser
AA seq
1087 aa
AA seq
DB search
MGTSPRTFLILGCFLTGPFLTFCQLPLPTIVPNRNEMVVQLNSNFTLKCSGDSEVSWQYP
VTEGSHRIDIRHEENNSGLFVTVLEVGNASAAHTGLYVCYYNHTQVEDGEVEGKDIYIYV
PDPDMPFVPSIPEDQFILVEEGDPTVIPCRTSDPNAQVTLINSLDKAVSAFYDSKQGFIG
NFPAGSYTCKTMVKGVEFKSDEFLIYILRATSQLPVEIEALKTVYKTGETIVVTCVVFDN
EVVNLQWNYPGKVKEKGLIKLDDIKVPSQKLVYTLTIPEASVKDTGDYECTARHATKEVK
ENKKVVITVHDKGFIHLEPQFSPLEAVNLHEVKNFVVDVQAYPAPKMYWLKDNVTLIENL
TEIVTSSNRVQETRFQSILKLIRAKEEDSGYYTLVAENEDEIKRYTFSLLIQVPALILDL
VDDHHGSAGGQTVRCLAEGTPLPDVEWLVCKDIKKCSNDTSWTLLTNNISDIHMEAHLDE
KNMVESQVTFQKVEETLAVRCVARNDLGAVTRELKLVAPTLRSELTVAAAVLVLLVIVII
SLIVLVIIWKQKPRYEIRWRVIESISPDGHEYIYVDPMQLPYDSRWEFPRDGLVLGRILG
SGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNL
LGACTKSGPIYIITEYCFHGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGMNPADESTRSY
VILSFENTGEYMDMKQADTTQYVPMLERKEGSKYSDIQRSVYDRPASYKKKSMSESEVKN
LLSDDSSEGLSLLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLA
RDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMM
VDSTFYNKIKSGYRMAKPDHATNEVYEIMVKCWNSEPEKRPSFYHLSEIVESLLPGEYKK
SYEKIHLDFLKSDHPAVTRMRGDCDNAYIGVTYKNEDKLKDRESGFDEQRLSADSGYIIP
LPDIDPVSEDELGKRNRHSSQTSEESAIETGSSSSTFIKREDETIEDIDMMDDIGIDSSD
LVEDSFL
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgggtacttccccacggacgttcctgatcctgggatgttttctcacaggaccgttccta
acattttgccagcttcctctgccgactattgttcccaataggaatgaaatggtggtgcag
ctgaattccaatttcacgcttaagtgctctggagacagtgaagtgagctggcagtaccca
gtgaccgagggaagccacaggatagacattagacatgaagaaaacaacagtggcctcttc
gtgacggtgctcgaagtaggaaatgcctcagccgctcatacgggcttgtatgtttgctat
tataaccacacgcaagtggaggatggggaagtggaagggaaagacatctacatctatgtg
cctgacccagacatgccttttgttccttctataccagaagaccagttcatcctagtagaa
gaaggtgatcccactgttatcccttgtcggacaagtgacccaaatgctcaagtgacttta
attaacagtttagacaaagctgtctctgctttctatgacagcaaacaaggcttcataggg
aatttccctgcgggctcgtatacatgcaaaacaatggttaaaggcgtggagttcaagtcc
gatgagttcctcatctatattttaagagctacttcacagctgccggttgaaattgaggct
cttaaaactgtctataaaacaggcgagaccatcgtagtgacttgtgtggtctttgacaat
gaggtggttaatttacagtggaattatcctgggaaagtgaaagaaaaaggtctgataaaa
cttgacgatatcaaagtcccatcgcagaagctggtttacaccttgaccattcctgaggca
tcagtgaaagacacaggggattatgaatgtactgcccggcatgcaaccaaggaggttaag
gaaaataagaaagtagtcattacagttcatgacaaaggattcattcacctggagcctcag
tttagccctctggaagctgtcaatctacacgaagtcaaaaactttgttgtcgatgtgcag
gcatacccagcaccaaaaatgtactggctgaaggataacgtgactctgattgaaaatctt
actgagattgttactagttccaacagagtccaggaaacaaggtttcagagtatattaaaa
ttgatccgggccaaggaagaagacagcggatactacactttggttgctgaaaatgaagat
gagattaaaagatacaccttctccttgctaatacaagttccagccctgatcttagacctc
gtggacgatcaccatggctctgcgggggggcagacagtgaggtgcttggcggaagggacc
ccgcttcctgatgtggaatggctggtttgcaaggacattaaaaagtgcagcaatgacacc
tcatggactcttttgactaacaatatctctgacatacacatggaagcccacctggatgag
aaaaacatggtggaaagccaggtgaccttccagaaggtagaggaaaccctagctgtgcga
tgtgtggcaaggaatgaccttggtgctgttactcgggaactgaagcttgtggctcccacc
ttgcgatcagaactaacggtggctgctgcagtcttagtgctgttagtgattgtgataatt
tcactgattgtcctggtcatcatatggaaacagaagccaaggtatgagataagatggaga
gtcattgagtctatcagccctgatggccacgaatacatttatgtggacccaatgcaactg
ccttatgactccagatgggagtttcctcgagacgggttagtgcttggtcgaatccttggt
tctggtgcatttggaaaagtagttgaagggactgcatatggattgagtcgctctcaaccg
gtgatgaaagtagctgtgaaaatgctgaaacctacagctagatccagcgaaaaacaggca
ctcatgtctgaactgaagataatgacacatctcgggccccacctgaatattgtgaatctg
cttggagcttgtacaaaatcaggtcctatttacatcatcactgaatactgctttcatggt
gatttggtgaactatctgcataagaacagggacaatttcctgagccgacacccggagaag
ccaaagaaagatttggatatctttgggatgaacccagctgatgaaagcacaagaagttat
gtgatattatcatttgaaaacactggagaatacatggacatgaaacaagctgataccact
cagtatgtgccaatgctggaaaggaaggagggatctaaatactctgatattcagagatct
gtgtatgatcggcctgcttcatataagaagaaatctatgtcagaatcagaagtcaaaaac
cttctttcagatgacagttcggagggcctcagcctactggatttgctgagcttcacctac
caggttgcacggggaatggaattcttggcttctaaaaattgtgtgcaccgtgacttggca
gctcgtaatgtcctcctggctcaaggaaaaatcgtgaagatctgtgactttgggctggct
agagacatcatgcatgattccaactatgtctccaagggcagcaccttcctcccagtaaaa
tggatggcacctgaaagcattttcgacaatctgtacacaacattaagtgatgtctggtct
tatggcattctgctgtgggaaatattttctcttggtggcacaccatatcctggcatgatg
gtcgattctactttctacaataagatcaagagtggctaccgaatggccaaacccgatcat
gctaccaatgaagtgtatgagatcatggtgaagtgctggaacagtgaaccagagaaaaga
ccttctttttaccatttgagtgaaattgtggagagcttgttgcctggagagtacaaaaag
agctatgagaagattcacctggacttcctgaaaagcgatcacccagctgtcacacgcatg
agaggggactgtgacaatgcttacattggtgtcacctacaagaatgaagacaagctaaag
gacagggagagtggatttgatgagcagaggctgagtgctgacagcgggtacatcattcct
ctgcctgacattgaccctgtttctgaagatgagcttggcaaaaggaacaggcacagttcc
cagacatctgaagaaagtgccattgaaaccggttccagtagctctactttcatcaagaga
gaggacgagaccattgaggacattgacatgatggatgacattgggattgactcctcagac
ctggtggaggacagcttcctgtaa
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