Calonectris borealis (Cory's shearwater): 142081918
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Entry
142081918 CDS
T11211
Symbol
DCTD
Name
(RefSeq) deoxycytidylate deaminase
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor00240
Pyrimidine metabolism
cbor01100
Metabolic pathways
cbor01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
142081918 (DCTD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cbor02044
]
142081918 (DCTD)
Enzymes [BR:
cbor01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
142081918 (DCTD)
Secretion system [BR:
cbor02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
142081918 (DCTD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
APOBEC4_like
SNAD4
APOBEC_N
Motif
Other DBs
NCBI-GeneID:
142081918
NCBI-ProteinID:
XP_075005390
LinkDB
All DBs
Position
4:37750207..37771311
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AA seq
191 aa
AA seq
DB search
MSGHQPSRHVNGFGNEASCKKREDYLEWPEYFMAVAFLSAQRSKDPSSQVGACIVNSENK
IVGIGYNGMPNGCSDDVLPWTRTAARRLDTKYPYVCHAELNAIMNKNSADVKGCSMYVAL
FPCNECAKLIIQAGIKEVIFMSDKYHDTTEMTAARRMFDLAGIIYREFKPKRNKIIIDFD
SINSRPNQKLL
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgagcggccaccagcccagccgccacgttaacggttttggcaatgaagcatcctgcaaa
aaacgagaggattatttggaatggcctgaatattttatggcagtagcttttttgtcagca
caaagaagcaaggatccaagttctcaggttggtgcctgcattgtaaattcagaaaacaag
attgttggaattggatacaatgggatgcctaatggctgcagcgatgatgtactaccctgg
acaagaacagcagcacgtagactagacacgaaatatccttacgtgtgccatgccgaattg
aatgccatcatgaacaaaaactcagctgatgtgaaaggctgcagcatgtatgttgcctta
tttccatgtaatgaatgtgcaaagctcatcatccaggcaggcataaaggaagttattttt
atgtctgacaagtatcatgacactacagaaatgacagctgcacggcggatgtttgattta
gcaggtattatatacagggaattcaagccaaagcgtaacaagatcatcatcgactttgat
tcaattaacagcagaccaaatcaaaagcttctgtga
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