Calonectris borealis (Cory's shearwater): 142082034
Help
Entry
142082034 CDS
T11211
Symbol
SMARCAD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cbor03036
]
142082034 (SMARCAD1)
Chromosome and associated proteins [BR:
cbor03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
142082034 (SMARCAD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
CUE
DEAD
HDA2-3
ERCC3_RAD25_C
HHH_3
Motif
Other DBs
NCBI-GeneID:
142082034
NCBI-ProteinID:
XP_075005680
LinkDB
All DBs
Position
4:53716871..53762592
Genome browser
AA seq
1028 aa
AA seq
DB search
MSLYNLDRFRFERKRKNAEQETVSPSAAQAQAAHSAAAGGAAGGDEDEATDDSNRPDTPA
SDVAEITGESGYSAIPETPEAKRTRKRSYFKHRRGVQFLDVSSDSEDEEPRNFSAAKENR
APRRDAVVISEQSDDDEQPEDERPQLTYVNGGDQLPAVKKNVEEDIRDAKLETLKELFPQ
RSDQELLQLIESAHTMDEAIAAGLKFNDEAASRKRKLKGSPTNCKNRNEQVTKKPKANYL
DESEPQRQWERQEMLVKKLQNTFPGLDKEELRDVLQEHNWVFHEALEALRVFAEDEDGME
FPPKSKASDWTEASAKSRSDESKEKPKQKSSGKEQNGFRKKDKGKRSVWSTKRETEDSED
ESASKDGGSSLDEDYSSGDEVMEDGYKAKILSFLQDASPSELTLIPQCSQKKAQKIIALR
PFNSWEALFAKMTKTTGLSEDIVWNCKILLKERDVVLKLMNKCEDISNKLTKQVTRITED
GGCGWNIEQPSILNQSLELKPYQKIGLNWLALLHKHGLNGILADEMGLGKTIQAIAFLAY
LYQEGNRGPHLIVVPASTLDNWIREVHLWCPELNVLFYYGSQEDRKHLRVDINNKVVDFN
VIVTTYNCAISSSDDRGLFRRLKLNYAIFDEGHMLKNMSSVRYQHLMTINAKNRLLLTGT
PVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSAEEQSIYEKERIAHAKQIIKPF
ILRRVKDEVLKQLPPKKDLIELCAMSEKQEQLYCDLLNKLKKTINSNEKNSDMGNVMMQL
RKMANHPLLHRQYYTTDKLRTMSMLMLKEPTHCDANPDLIFEDMTVMTDFELHLLCKQYS
HVSDFKLDMDQILDSGKFRALERILSDLKEKGDRVVLFSQFTMMLDILEVFLKHWQHRYI
RLDGKTQISDRIHLIDQFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQ
AEDRCHRVGQTREVKVIKLISKETIEESMLKISQQKLKLEQDMTAADSGEEGTIPADIAT
LLKASLGL
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgagtctctacaacttggaccgctttcgctttgagaggaagagaaaaaacgcggagcag
gaaactgtgtctccttcggcagcccaggcgcaggcagctcactctgctgcagcgggtggt
gctgctggaggggatgaggatgaagctacggatgacagcaacaggccagatactccagct
tcggatgtggcagagataactggtgagtcagggtactccgccatcccagaaactcctgaa
gccaagaggacgaggaagcgatcttatttcaagcatcgaagaggggtacagttcctagat
gtgtcttcagacagcgaagatgaagaaccaagaaacttcagtgctgcaaaagaaaacagg
gctccaaggagagatgcggttgtaatctctgaacagtctgatgatgatgaacagcctgaa
gatgaacgaccccagttgacatacgtaaatggtggggatcagctgccagctgtgaagaag
aatgtagaggaagacatcagagacgcaaagctggaaacactgaaggaactttttccccaa
agaagtgaccaagaattactacaattgatagaatcggcacacacaatggatgaagcaata
gctgctggtttgaagttcaatgacgaagctgcctctcgtaaaaggaaactaaaaggttct
cccacaaattgcaaaaacagaaatgagcaagtcacaaaaaagccaaaagctaattacctg
gatgagtcagaaccccaaagacaatgggagaggcaagagatgcttgtgaagaagctgcaa
aatacattccctggattggataaggaggagctgagagatgtacttcaggaacataactgg
gtgtttcatgaagcactggaggccctgagagtatttgcagaagatgaagacggcatggaa
tttcctcccaaaagtaaagcttctgactggaccgaagcctccgcaaagagcagaagcgat
gagagtaaagagaagccaaagcagaaatcttccgggaaagagcagaacggctttcggaaa
aaggacaaaggcaaaaggagcgtttggagtactaaaagagaaacagaagactcggaggat
gagtcagcttccaaagacggtggtagctcccttgacgaggactacagcagcggtgacgaa
gtgatggaggatggctacaaagcgaaaatcctcagcttcctgcaggatgcttccccgagc
gaactgactttgattccacagtgttctcagaaaaaggctcagaagataatagcgctccgg
ccctttaacagctgggaggctctgtttgcaaaaatgactaagactactggtttgtcagaa
gacatagtgtggaactgcaagatactgctgaaggagagggacgtggttctaaagctcatg
aataaatgtgaagacatttcaaataaactgacaaaacaagtaaccagaattactgaagac
ggaggatgtggatggaacatagagcaaccctccattctgaatcagagtttggaactcaag
ccatatcagaagattggtttgaactggttagcactgctgcataaacacggcttgaatggc
atattggctgatgaaatgggcttaggaaaaacaattcaagctattgcatttctagcttat
ctctaccaagagggcaataggggtccccatttgatagttgtgccagcttcaacattagat
aactggataagagaagttcatctgtggtgtcctgaactgaatgtccttttttactacgga
tcccaagaagataggaaacatctcagggtggacattaataataaagttgtcgatttcaat
gtgattgtaactacatacaactgtgcaattagcagctcagatgatcgagggctgtttcgc
aggttgaagcttaactatgcaatttttgatgaaggtcatatgctcaagaacatgagctct
gtacgctaccagcaccttatgacaattaatgcaaagaatcgcttactgctaacggggact
ccagttcaaaataatctgttggaattgatgtccctcttgaattttgtcatgccgcatatg
ttcagcagtagcacaagtgaaatccgaaggatgttctcttcaaaaacaaagagtgctgaa
gaacaaagcatatatgaaaaggagaggattgcacatgcaaagcagataataaaaccattc
atcttgagaagagtaaaagatgaggtccttaaacaactacctcccaaaaaagatctcatt
gaattatgtgctatgtctgagaaacaggaacaactatactgtgatctcttaaacaagctc
aagaaaactattaacagtaatgagaaaaactccgatatgggaaatgtaatgatgcaactt
agaaaaatggctaatcaccctctcttgcatcgtcagtattacacgactgacaagctcagg
acaatgtccatgcttatgctcaaggaacccacacattgtgatgctaaccctgaccttatc
tttgaagacatgacagtaatgacagattttgagctgcatttgctttgtaagcaatattct
cacgtcagtgacttcaagttagacatggatcagatcttggattctggaaagtttagagca
ctggaacgcattctctccgaccttaaagagaagggtgacagagttgtattgttcagccag
tttactatgatgctggatatcttggaagttttcctaaaacattggcaacatagatatatt
aggttggatggaaaaacccaaatttctgatcggatacatctaatagatcagttcaataca
gatatggatatatttgtattcctcctgtcaaccaaagctggtggcttgggaattaatctg
acctcagcaaatgttgttattcttcatgacattgattgcaacccatacaatgataagcaa
gcagaagaccgatgccatagagtaggtcagacaagagaagtaaaagtcataaagctaatc
agtaaggagactattgaagaatccatgctcaaaatcagccagcagaaattgaagttagaa
caagatatgactgcagcagattcaggagaagaaggaaccattccagcagatatagccaca
ctattaaaagcttcgttaggtctctaa
DBGET
integrated database retrieval system
