Calonectris borealis (Cory's shearwater): 142082124
Help
Entry
142082124 CDS
T11211
Symbol
LGR5
Name
(RefSeq) leucine-rich repeat-containing G-protein coupled receptor 5
KO
K04308
leucine-rich repeat-containing G protein-coupled receptor 5
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
142082124 (LGR5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cbor04030
]
142082124 (LGR5)
G protein-coupled receptors [BR:
cbor04030
]
Rhodopsin family
Others
R-spondin
142082124 (LGR5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_14
7tm_1
LRR_9
LRR_LRWD1
LRR_EndoS
LRRNT
7TM_GPCR_Srx
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
142082124
NCBI-ProteinID:
XP_075006000
LinkDB
All DBs
Position
1:40959099..41047813
Genome browser
AA seq
908 aa
AA seq
DB search
MATSRAARALLLLLLFCLPGLRRGARGGGQRPRGCPVPCRCEQEGMLVRADCSDLGLTAV
PANLSVFTSYLDLSMNNITKLPSNPVHNLRFLEELRLAGNGLTYIPKGAFAGLFSLKVLM
LQNNQLRQVPTEALQNLRSLQSLRLDANHINYVPPNCFNGLVSLRHLWLDDNSLTEIPVQ
AFRSLPALQAMTLALNKIHYIPDYAFGNLSSLVVLHLHNNRIYSLGKKCFDGLHSLETLD
LNYNSLDEFPTAIRTLTNLKELGFHSNNIKSIPERAFVGNPSLITIHFYDNPIQLVGKSA
FQHLPELRTLTLNGASQITEFPDLTGTTSLESLTLTGAQITSLPKSACDQLPNLQVLDLS
YNLLEDLPCFTACKKLQKIDLHHNEISEIKADTFRQLAALRSLDLAWNKIKIIHPNAFSS
LPSLIKLDVSSNLLSSFPVMGLHGLTHLKLTGNHALQSLISSENFPELKVMEMPYAYQCC
AFGACESHYRISSQWNKDENSSIDDFHRKDAGLLQIQDERDFEDFFLDFEEDLKAHHSVQ
CSPSPGPFKPCDHLFGSWLIRIGVWTIVGLTFICNALVSATVFRSPLYMSSIKLLIGLIA
IVNALMGLASGVLASVDASTFGSFAQYGAQWESGIGCQITGLLSIFASEASIFLLTLAAL
ERAFSVKHTTKFETKSSIASVKIAIFFCFMLALIIAVIPLLTGSEYGVSPLCLPLPFGEP
TAMGYMVALVLLNSLCFLVMTIAYTKLYCSLEKGELDNIWDCSMVKHIALLLFTNCILYC
PVAFLSFSSLLNLTFISPEVIKSILLVIVPLPACLNPLLYILFNPHFKEDLGSLRKQTLL
WRRSKHASLISVNSEDIEKQSCDSTQALVTFTSASISYDMPTSNSLMPSSYQMTESCNLS
SVAFVPCR
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtcccgcgctgcccgcgccctcctccttctcctcctcttctgcctgccgggg
ctgcggcggggggcgcggggcggcgggcagcgcccgcggggctgcccggtgccgtgccgc
tgcgagcaggagggcatgcttgtccgcgccgactgctccgacctggggctcacggcagtg
cccgccaacctcagcgtcttcacctcctaccttgatctcagtatgaacaacattactaag
ctgccctcaaaccctgtgcacaatctccgcttcctggaagagctacgtcttgcaggaaat
ggcttgacatacattcctaagggagcatttgctggccttttcagtcttaaagtgctgatg
ctgcagaataaccaactacgacaggttcctactgaagcactccagaacttgcgcagcctt
cagtccctacgtctggatgccaaccacatcaactatgtgccccccaactgcttcaatggc
ttggtctctcttagacacctatggctagatgataattctttgacagaaattcccgtccaa
gcttttagaagtttaccagcacttcaggcaatgacattggcactgaataaaattcattac
ataccagactatgcttttggaaacctctctagtttggtagttctacatctccataacaat
agaatctactccctgggaaagaaatgctttgatgggctccacagcctagagactttagat
ttaaattacaacagtctggacgagttccccactgctatcaggacactaacaaacctaaaa
gaactgggatttcatagcaataacatcaagtcaatacctgagcgtgcatttgtgggtaat
ccatcacttattacaatacatttttatgataaccctatccagcttgttggaaaatctgct
tttcaacacttaccagaactcagaactctgactttaaatggtgcttcacagataacagag
tttcctgatctgacagggactacaagtctggagagtttaacactcacaggagcacagatc
acctctctccccaaatcagcttgtgaccagttacctaatctccaagtgctggatctgtct
tacaacctcttggaagatttaccctgttttactgcatgtaaaaaactccaaaaaattgac
ttgcatcacaatgaaatcagtgaaatcaaagcagacacatttcggcagctggctgctctt
cggtctctggatttagcttggaacaaaattaaaattattcaccccaatgccttctcctct
ttaccatctctgatcaaactggatgtgtcatccaaccttttgtcctcttttcctgtgatg
gggctacatggtttaactcatttaaaattaacaggaaatcatgctctacaaagtttgata
tcatctgaaaattttccagaactcaaggtcatggaaatgccttatgcttatcagtgctgt
gcctttggagcttgtgagagccactacagaatctccagccaatggaacaaagatgagaat
agcagcattgatgattttcacaggaaggatgctggattgttacaaattcaagatgagcgt
gactttgaagatttttttcttgactttgaagaagatttgaaagctcatcattcagtgcag
tgttcaccttctccaggtcccttcaaaccatgtgaccatctgtttggtagctggctgatc
agaattggagtgtggaccatagtgggtttgacctttatttgcaatgcactggtgtctgct
acagttttcagatctccattgtatatgtcctccataaaacttttgatcggtttaatagct
attgtaaatgccttgatgggtctggctagcggagtactggctagtgtggatgcatcaact
tttggtagctttgctcagtacggagcacagtgggaaagtggaattggttgccaaataact
ggccttctctccatttttgcttcagaggcttccattttcctccttaccctagctgcactt
gaacgtgcattctctgtaaagcacactacaaagtttgaaacaaaatcctccattgctagt
gtaaaaattgccattttcttttgctttatgttggcactaatcattgcagtgataccactc
ctcactgggagtgagtatggggtttctccgctttgtttaccactaccatttggagaaccc
actgctatgggatacatggtagcactggtattgctgaactccctttgttttctggtaatg
actattgcttatacaaagctctactgtagtttagaaaagggagaattagacaacatttgg
gattgctctatggtcaaacatattgccttgctactttttactaattgcattctttattgc
cctgtggccttcttatctttttcctccttactaaacctcacttttatcagcccagaagtg
attaagtcaatactgctagtgattgtcccactgcctgcatgcctaaacccactcctttat
atacttttcaatccacactttaaggaggacttgggaagtctgcgaaagcaaactttgtta
tggaggagatcaaaacatgctagtctgatctctgtgaattcagaagacatagaaaaacaa
tcttgtgactcaacacaagcattggtaaccttcacaagtgccagcatatcatatgatatg
cctaccagcaattcactaatgccatcatcttatcaaatgacagaaagctgcaatctttca
tcagttgcatttgttccgtgtcgctag
DBGET
integrated database retrieval system
