Calonectris borealis (Cory's shearwater): 142082137
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Entry
142082137 CDS
T11211
Symbol
PKD2
Name
(RefSeq) polycystin-2
KO
K04986
polycystin 2
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cbor03037
]
142082137 (PKD2)
04040 Ion channels [BR:
cbor04040
]
142082137 (PKD2)
Cilium and associated proteins [BR:
cbor03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
142082137 (PKD2)
Ion channels [BR:
cbor04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
142082137 (PKD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_1
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
142082137
NCBI-ProteinID:
XP_075006035
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All DBs
Position
4:66328191..66354388
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AA seq
906 aa
AA seq
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MAGRGGCQRGREQLELERLGEAARAGSCPPSPPLSACSRQAWSRDNPGFEPEEEGAAVAA
GPVLEMDVEWGSPAAGASSSLGSGAAGQGGGAVGRRQRRLPVGCGGAEVPSRHQVPPDGA
APHRAAWAKRLARRLRGLWGTRLMEESNTSRERYLKSILRELVTYMIFLVVLCVLTYGTV
SSSMYYYTRIMSQLFLETPVSKMEKTDFKTLSTMDDFWKFTEGPLLDGLYWEMWYNNKTM
AENKSFIYYENLLLGVPRIRQLKVRNGSCSIPEDLKDEIKDCYDVYSVANEDTAPFGLRN
GTAWTYTNEKDLNGSSHWGLIATYSGAGYYQDLSRTREVTAVQIASLKQNLWLDRGTRAA
FIDFSVYNANINLFCVVRLLVEFPATGGLVTSWQFQPVRLIHYISTFDFFLAACEMAFCL
FVLYYMVEEILEIHIHRLHYFRSLWNCLDILIIVLSVIAIGISIYRTSTVDMLLKKLLED
QNSFPNFEPLAYWQMQFNNIAAVTVFFVWIKLFKFVNFNRTMSQLSTTMSRCVKDVIGFA
IMFFIIFLAYAQLAYLVFGTQIDDFSTFQDCIFTQFRIILGDFNFTEVEEANRILGPIYF
TTFVFFMFFILLNMFLAIINDTYSEVKSDMAQQKAEMELSDLIRKGYNKAMIKLKLKKTT
VDDISESLRQGGGKLNFDELRQDLKGKGHTDAEIEAIFTKYDQDGDQELTEHEHQQMRDD
LEKEREDLDLDRSSLPRPLSSRSFPRSVDDSEEDEDEDSGHSSRRRGSSSSGVSYEEFQV
LMRRVDRMEHSIGSIVSKIDAVIVKLEAMERAKLKRRDVLGRLLDGVTEDERLGRDNEIH
REQMERLVREELERWESDDAASQMSHRLGTPLGLNGQPRSRNSRPSSSQSDGIDGGGGSG
GNNIHV
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggcgggccgcgggggctgccagcgcgggcgggagcagctggagctggagcggctgggc
gaggcggcgcgggccggctcctgcccgccgtcgccgccgctctccgcctgctcgcggcag
gcctggagccgggacaacccgggcttcgagcccgaggaggagggggcggcggtggcggca
gggccggtgctggagatggatgtggagtggggcagccccgcggctggcgcttcgtcgtcg
ttgggcagcggcgcggcgggtcaaggcggcggcgccgtcgggcggcggcagcgacggctc
cccgtggggtgcggcggggcggaggtgccgagccgccaccaggtgccgcccgacggcgcc
gcaccccaccgagcggcctgggccaagcgcttggcgcggcgactgcgaggtctgtggggg
acaagactcatggaagaaagcaacaccagcagagagcgatatctgaaaagtattttacgg
gagttggttacgtacatgattttccttgtggtcttgtgtgtcctgacttacgggacagtg
agttccagtatgtactattacacaaggattatgtcgcagctcttcctggaaacacctgta
tcgaaaatggagaaaactgatttcaaaactttgtccacaatggatgacttctggaagttc
acagaaggcccgttgctggatggtctttactgggagatgtggtacaacaacaaaaccatg
gcagaaaacaaaagcttcatttattatgagaacctgctcctaggggtgcctcgcattcgg
cagctgaaagtaagaaatggttcgtgctcaatacctgaagatttaaaggatgaaatcaaa
gactgctatgatgtctattctgtagctaatgaagatactgctccttttggacttcgaaat
ggaacagcttggacatacaccaatgagaaggatttgaatgggagcagccactggggcttg
attgccacatacagtggggctggttattaccaagacctctcaaggaccagagaagtgaca
gctgtgcagattgctagccttaagcagaacctgtggctggacagagggaccagagcagct
ttcattgatttctccgtatacaatgcaaacatcaacctattctgcgttgtcaggttgtta
gtggagtttccagcgactggaggccttgttacatcttggcagtttcagccagtgaggctg
attcactatatctccactttcgatttttttctggcagcctgtgaaatggcattttgtctt
tttgttctttattatatggtggaagagatcttagaaattcacattcatagactgcactac
ttcagaagtctctggaattgccttgatatccttatcattgtgctctctgtgatagctata
ggaattagcatctataggacatcaactgttgatatgctcttgaagaagctgctggaagat
cagaactcgttccccaattttgaacctttggcatactggcaaatgcaattcaacaacatt
gctgcagtcactgtgttttttgtctggattaagcttttcaaatttgttaacttcaacaga
acaatgagtcagttatccaccaccatgtctcgctgtgtcaaagatgtcattggctttgcc
attatgttttttattattttcttagcatatgctcagttggcctatcttgtctttggcact
caaattgatgacttcagcactttccaggattgcatatttactcagttccgcatcattttg
ggagacttcaacttcacagaggttgaagaagctaatcgaattttgggaccaatctatttc
actacatttgtgttctttatgttcttcattcttttgaacatgtttttggccattatcaat
gatacatactccgaagtcaaatcagatatggcacaacagaaggcagaaatggaactgtct
gaccttattagaaagggttacaacaaagccatgatcaaacttaaattgaagaaaactact
gttgatgacatttcggaaagtctgagacaaggtgggggaaaactaaattttgatgaactc
cggcaagatctaaaagggaaggggcacacggatgcagagattgaagcaatatttaccaaa
tatgaccaggatggggaccaggaattgacagagcatgaacatcagcagatgagagatgac
ctggagaaagagagggaggatctggacctggataggagctctctgccacgtcctctgagc
agccgcagcttcccccggagcgtggacgactctgaggaggatgaggatgaagacagtgga
cacagctccaggaggaggggcagcagctctagtggggtttcctatgaagagttccaagta
ctcatgaggcgggtcgatcgcatggagcattctattggcagtattgtctccaagattgat
gcggttattgtgaagctcgaagcaatggagagagccaaactaaaaaggagagatgtgttg
ggaagactgttagatggagtgacagaggatgaaagactgggtcgtgacaatgaaatccac
agggaacaaatggagcgacttgtgcgagaggagttggagcgatgggaatcagatgatgca
gcatcccaaatgagccatcggttgggaacaccacttgggctgaatggccagcctcgttcg
aggaactctcggccatcttcctcccagtcggatggtattgatgggggaggaggaagtggg
gggaataacatccatgtgtag
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