KEGG   Calonectris borealis (Cory's shearwater): 142082149
Entry
142082149         CDS       T11211                                 
Symbol
HELQ
Name
(RefSeq) helicase POLQ-like isoform X1
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
cbor  Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:cbor00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cbor03400]
    142082149 (HELQ)
Enzymes [BR:cbor01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     142082149 (HELQ)
DNA repair and recombination proteins [BR:cbor03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    142082149 (HELQ)
SSDB
Motif
Pfam: POLQ_helical HTH_61 DEAD Helicase_C ResIII HHH_5 DUF7898 DUF4332 DNA_pol_lambd_f RIMB1_N DGKD_4H Sll0103_C DUF3135 Cdd1
Other DBs
NCBI-GeneID: 142082149
NCBI-ProteinID: XP_075006072
LinkDB
Position
4
AA seq 1053 aa
MAEPSLTVRRKSRSGSVRKRSRAPVQPSAVCSPVARKRPSSGGEGLPAETPCSNDSEEDM
FGDYDSFYGNDSLLAQVDDVEHKYLQDKNTDIKAAGEIILGNLQSGIHQKKQDYFSASEN
MVVLKADKEDAFQTNENDPVDSNQELTESILDDLPSSQLLYFEKMDKLSSDSRISPVSER
RNKCVNSSSDKIRSLSPFCPDAEHGNRPTDFSSDSKCDLFKTESLKDHLKSAMTGNAKAQ
TLQVSKTKQLKEAVLSEEICVARKTIESSSVDIGPFYGLPSKVKDLFRQFRGIETLYEWQ
HDCLMLESLQQRKNLIYSLPTSGGKTLVAEIIILQELLCRQKDVLMILPYVAIVQEKVRG
LSSFGIELGFLVEEYAGSKGRFPPIKRRIKKSLYIATIEKGHALVNSLIETERIDDLGLV
VVDELHMLGEGSRGATLEITLAKILYTSKNTQIIGMSATLNNVGDLQKFLQAEYYTNNFR
PVELKEYVKIRDTIYAVDDKTENGYTFSHLLNFKYSSNLEKADPDHIIALVTEVIPKYSC
LIFCPTKKNCENVASMVCKYLKKEFRAHREKEKQDLIKNLKNIGNGSVCPVLKQTIPFGV
AYHHSGLTNDERKSIEEAYSTGVLCLLACTATLAAGVNLPARRVILRAPYVANDVLKKNQ
YKQMIGRAGRAGIDSAGESILIVQEKDKHLVQDLVNSPLENCYSNLLLELTKGMQSLLLS
LVGLKIAVTCEEVDNFMCNTLLGVQQQLLSKEKSLSEIIRDGLENLIEKGLLKGRISEKD
QDSKCILTITLLGKATYKGSIDLAYCNLLYRELKKGLEGLILESNLHLLYLATPYDMTSN
CSPDWMIYLRQFNQLSAAEQKVADIVGVPESFITKKASGQAIRKNVDSAVVNRLYLSFVL
YTLLKETNIWSVSEKFNMSRGYVQNLLNSAASFASCVLHFCEELEEFWVYKALLTELTKQ
LTYCVKTELIPLMEVAGVLEARAKQLYNAGYKTLAHLANANPETLVKMIEHLSRRQAKQI
VSSAKMLLSEKAEALQEEVEELLKVPTNIPGTY
NT seq 3162 nt   +upstreamnt  +downstreamnt
atggccgagcccagtctgacggtgcggaggaagagccgctccggctctgtccggaagcgg
agccgggccccggtgcagcctagcgccgtctgctcgccggtggctcgcaagagaccgagc
tccggtggcgaggggctcccggcggagaccccgtgtagtaatgatagtgaagaagatatg
tttggcgactatgacagcttttatggaaatgattctttgctagctcaagttgatgatgta
gagcacaaatacctgcaggataaaaatacagatattaaagcagctggagaaatcatactt
gggaatcttcagtcaggaattcatcagaaaaaacaagattatttttctgcttcagaaaat
atggttgtccttaaagctgacaaagaggatgctttccaaacgaatgaaaatgacccggtg
gatagcaatcaagaactgactgaatctattttagatgacttgccatcatcgcaacttttg
tattttgagaaaatggataaactttcttctgattctagaatatctccagtctcagaaagg
aggaataaatgtgtgaattcttcctcggacaaaatcaggagtctatcacctttttgtcct
gatgctgaacatgggaacagacctactgacttttcctcagactctaagtgtgatttattt
aaaactgagagtcttaaagatcatctgaaaagtgctatgactggaaatgccaaagcccag
actctgcaggtctctaagaccaagcagctgaaagaagctgttttatcggaagagatttgt
gttgctagaaaaactattgaatcttcttcagttgatataggccctttttatggattacct
agcaaagttaaagacctattcagacaatttcgagggattgaaacgctttatgaatggcag
catgattgcttaatgttagaatctctacagcaaagaaagaatttaatttactcattgcca
acaagtggtggaaaaacacttgtagctgaaataataattctccaagaattactttgcagg
cagaaggatgttctgatgatcctgccatatgttgccattgtccaagaaaaggttaggggt
ttatcgagttttgggatagaattgggtttcctggttgaagaatacgcaggaagtaaagga
agatttccaccaatcaagaggagaataaaaaagtctctttatattgctactatagaaaaa
ggacatgctctagtgaattccttaattgaaacagaaagaattgatgaccttggtctggtt
gtagtagatgagttgcatatgctaggtgagggaagtcgtggagcaacgctggaaatcact
cttgcaaaaattctttacactagtaaaaacacgcaaatcattggaatgagcgcaacttta
aataatgttggagacctgcagaagttcctgcaagcggagtactatactaataattttaga
ccggtagaattaaaggaatatgtaaagatacgagacaccatttatgcagttgacgacaaa
acagaaaatggctatactttttcacatctccttaacttcaagtattctagtaatctggag
aaagcagatcctgaccacatcattgcgctggttactgaagttattcctaaatattcctgc
ctaatcttttgtcccactaaaaagaactgtgaaaatgtggcttccatggtgtgcaagtac
ctcaagaaagaatttagagctcacagggagaaagagaaacaagatctcatcaagaaccta
aagaatattggaaatggaagtgtctgtcctgttctgaagcaaacaatcccttttggtgtt
gcatatcaccatagtggccttacaaatgatgaaagaaaaagtatagaggaagcatattct
acaggtgtcctgtgtctacttgcttgtacggctactttagctgctggagtcaacctgcca
gctagaagggttattctcagagctccttatgttgctaatgatgtcctgaagaagaaccag
tataaacaaatgattggcagagctggtcgagctggtattgacagtgctggagaaagtatt
ctcatagtgcaagaaaaagacaagcacttggttcaggatttagttaacagtcctttggag
aattgttacagcaatcttctgctggagttgaccaagggaatgcagagcctgttgttatct
ttggttggactgaagatagcagttacctgtgaggaagtcgacaattttatgtgcaataca
ttactgggtgttcagcagcagctgctgtctaaagagaagagcctctcagagataattaga
gatgggctagaaaatctaatagaaaaaggactcctaaaaggaagaatatctgagaaggac
caagattccaaatgtatactaacaatcacgctgttgggtaaagctacatataaagggtct
atagacttggcatactgcaatcttctttacagagaattgaagaaaggtttggaagggctg
attcttgagagcaatcttcatcttctatatctggcaactccgtatgatatgacttctaac
tgtagcccagattggatgatatacttgagacagttcaaccagttaagtgcagcagagcaa
aaagtagcggatattgtgggagtacctgaaagctttattacaaaaaaggcttctggtcaa
gccatcagaaagaatgtggacagtgctgtggtaaacaggctctacctgtcgtttgtcctt
tataccctactgaaagagaccaatatatggagcgtttcagagaaatttaatatgtctcga
ggatatgtgcaaaatctccttaattctgctgcctcatttgcctcctgtgttctccatttc
tgtgaggaattggaagaattctgggtttataaagccttgctgacagaacttaccaagcag
ttgacatactgtgttaagacagaactcatccctctgatggaggtagcaggggttctagag
gctagagcaaaacagctttataatgcaggatacaaaactttagcacacttggctaatgca
aatccagaaactctggtcaagatgattgagcacttgtcacgacgtcaagccaaacaaatt
gtttcatctgcaaagatgctgctgagtgaaaaagctgaggctttacaagaagaagttgaa
gaactcttaaaggtgcctacaaatatcccagggacctactga

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